New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2256197	46 (0.740)	7 (0.120)	7/324	NT	13.8%	intergenic (+257/‑447)	asd/PP_1990	Aspartate‑semialdehyde dehydrogenase/transposase
	?	AE015451	= 4908026	44 (0.760)					intergenic (‑2/‑280)	PP_4317/PP_4318	conserved protein of unknown function/transposase

GAATTCGAGGCGTCATTATGCGGAGTCACCGGCCAGTACAGTCAATGGAAATAACAAGGCAAAACTGTACTGTGCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCC  >  AE015451/4907802‑4908249                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                 gAATTCGAGGCGTCATTATGCGGAGTCACCGGCCAGTACAGTCAATGGAAATAACAAGGCAAAACTGTACTGTGCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCaa                                                                                                                                                                                                                       >  1:793861/1‑236 (MQ=255)               aTTATGCGGAGTCACCGGCCAGTACAGTCAATGGAAATAACAAGGCAAAACTGTACTGTGCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAgcg                                                                                                                                                                                                                    >  2:1006439/1‑225 (MQ=255)                           cACCGGCCAGTACAGTCAATGGAAATAACAAGGCAAAACTGTACTGTGCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGGCTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCt                                                                                                                                                                                             <  1:1130623/235‑1 (MQ=255)                           cACCGGCCAGTACAGTCAATGGAAATAACAAGGCAAAACTGTACTGTGCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAg                                                                                                                                                                                                               >  1:52177/1‑218 (MQ=255)                            aCCGGCCAGTACAGTCAATGGAAATAACAAGGCAAAACTGTACTGTGCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCt                                                                                                                                                                                             <  1:487012/235‑1 (MQ=255)                             ccGGCCAGTACAGTCAATGGAAATAACAAGGCAAAACTGTACTGTGCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGATGCCGAACGCAGGCCTTGCGGAGACAGGTGACGGGCATGGatgccccg                                                                                                                                                                                                                          <  1:224253‑M2/205‑9 (MQ=255)                                   aGTACAGTCAATGGAAATAACAAGGCAAAACTGTACTGTGCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCg                                                                                                                                                                                          <  1:857893/236‑1 (MQ=14)                                        aGTCAATGGAAATAACAAGGCAAAACTGTACTGTGCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGatgcccgtcacctcccttcgcaagccctgcgctcggccttctgaagtc                                                                                                                                                                                  <  2:1098520‑M2/234‑49 (MQ=255)                                                  aaTAACAAGGCAAAACTGTACTGTGCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGa                                                                                                                                                                     >  1:524564/1‑236 (MQ=255)                                                  aaTAACAAGGCAAAACTGTACTGTGCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATCCATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGACTGCAGCGC‑GTACTCCCGGGAGc                                                                                                                                                                       >  2:682518/1‑234 (MQ=17)                                                                  tgtactgtGCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGatgcccgtcacctcccttcgcaa                                                                                                                                                                                                           >  1:493570‑M2/1‑160 (MQ=255)                                                                  ggtcctgtGCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGAGCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTGGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAgcg                                                                                                                                                                                                                    <  2:314613/170‑1 (MQ=255)                                                                       tgtgCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCgg                                                                                                                                                                           >  1:578555/1‑209 (MQ=255)                                                                       tgtgCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCg                                                                                                                                                >  1:91077/1‑236 (MQ=255)                                                                            tgttgttgttgtTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCt                                                                                                                                                                                                                  <  1:935623/166‑1 (MQ=255)                                                                            tgttgtTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGag                                                                                                                                                                                                                                <  2:269604‑M2/152‑3 (MQ=255)                                                                            tgttgtTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGc                                                                                                                                                                              >  1:370363/1‑201 (MQ=40)                                                                            tgttgtTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGa                                                                                                                                                                         >  2:1028860/1‑206 (MQ=255)                                                                            tgttgtTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGagc                                                                                                                                            >  1:985505/1‑235 (MQ=255)                                                                            tgttgtTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGCCCTTGCGGAGGCAGGTGACGGGCATGGatgcccgtccccccccttcgcaagccctgcgccc                                                                                                                                                                                                <  2:62742‑M2/184‑35 (MQ=255)                                                                              ttgttgCTGTTGCTGTTGTCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCGTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑g                                                                                                                                                                                                       <  2:797127/174‑1 (MQ=255)                                                                                 ttgctgttgctgttgcCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGagcgc                                                                                                                                          >  1:787981/1‑232 (MQ=40)                                                                                  tgttgttgctgttgctgttgcCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGagcgcagcg                                                                                                                                      >  1:517659/4‑235 (MQ=255)                                                                                      gttgctgttgcCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAggg                                                                                                                                 >  1:1026109/1‑236 (MQ=39)                                                                                      gttgctgttgcCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATCCATGCCCGTCAAGCGCTGAGGCCCCatg                                                                                                                                                                                                       <  1:928599/167‑3 (MQ=255)                                                                                      gttgctgttgcCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATCCATGCCCGTCAAGCGCTGAGGCCCCatg                                                                                                                                                                                                       >  2:928598/1‑165 (MQ=255)                                                                                        tgccgttgccgttgccgttgccgttgccgttgccg‑‑‑‑‑‑tTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGAGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGCGTGAg                                                                                                                                                         >  1:446961/1‑210 (MQ=9)                                                                                            gttgccgttgccgttgccgttgccgttgccG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAgcgc                                                                                                                                                                                                                   <  2:184648/149‑1 (MQ=37)                                                                                                   ttgccgttgccgttgccgttgccg‑‑‑‑‑‑tggATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGatgcccgtcacctgcct                                                                                                                                                                                                                 >  1:8357‑M2/1‑127 (MQ=255)                                                                                                         ttgccgttgccgttgccg‑‑‑‑‑‑ttgccgttgccgttgccgTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGc                                                                                                                                                                  <  1:802279/184‑1 (MQ=11)                                                                                                             cgttgccgttgccg‑‑‑‑‑‑ttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGa                                                                                                                   >  2:771152/1‑227 (MQ=35)                                                                                                                   cgttgccg‑‑‑‑‑‑ttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTg                                                                                                    >  1:1055871/1‑236 (MQ=34)                                                                                                                     ttgccg‑‑‑‑‑‑ttgATCTTGCTCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCg                                                                                                                                                <  2:66064/190‑1 (MQ=25)                                                                                                                                gttgccgttgatcttgatcttgatcttgatcttgatcttgatcttgatcttCGCGACTGCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGa                                                                                                                                              <  2:45585/180‑1 (MQ=11)                                                                                                                                     tcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGgat                                                                                                                          >  2:1098108/1‑202 (MQ=31)                                                                                                                                                          tgatcttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGAGGGGGCCTTCGGCGCGGTCCTTCCGGGGGCGAGGCCGGAGTGAGGGGACCCCGGagcgcag                                                                                                                                        <  1:588955/167‑1 (MQ=9)                                                                                                                                                              cttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGgatg                                                                                                                         >  1:236577/1‑178 (MQ=31)                                                                                                                                                                    cttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCACTGACGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGcccg                                                                                                                                                               >  2:101964/1‑132 (MQ=12)                                                                                                                                                                       gatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGcc                                                      <  1:771153/236‑1 (MQ=31)                                                                                                                                                                          cttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaa                                                                            >  1:52791/1‑211 (MQ=31)                                                                                                                                                                          cttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGa                                                                     >  1:197202/1‑218 (MQ=31)                                                                                                                                                                          cttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTAAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAgc                                                                                                                 <  1:955891/174‑1 (MQ=17)                                                                                                                                                                          cttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTAAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAgc                                                                                                                 >  2:955890/1‑174 (MQ=17)                                                                                                                                                                               tcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGGTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAgg                                                         >  1:74332/1‑225 (MQ=14)                                                                                                                                                                                     cgACTTCAGGAGGCGGAACGCAGGGCTGGCGGAGGCAGGAGACGGGCATGGATGCCCGTGAAGCGCTGAGGCACCA‑GGATGGGGCCTGCGGCGCGGTCCTGCCGGGAGCGAGGCCGGGGTGAgg                                                                                                                                                        <  2:98727/124‑1 (MQ=11)                                                                                                                                                                                      gccTTCAGGTGGCCGAACGCAGGTCTTGCGGAGGCAGGTGACGGGCCTGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCATCGGCGCGGTGCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGagcgcagc                                                                                                                                       <  1:614393/138‑1 (MQ=11)                                                                                                                                                                                      gACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGCGCGCAGCGt                                                                                                          >  2:17064/1‑169 (MQ=14)                                                                                                                                                                                                       cGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGc                                                       <  2:517658/203‑1 (MQ=31)                                                                                                                                                                                                        gCAGGGCTTGCGGAGGGAGGTGACGGGCATGGatgcccgtcacctccctccgcaagccctgcgctc                                                                                                                                                                                                >  1:56666‑M2/1‑32 (MQ=255)                                                                                                                                                                                                        gCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAggg                                                                                                                                                       >  1:65880/1‑106 (MQ=32)                                                                                                                                                                                                         cAGGCCTTGCGGAGGCAGGTGACGGGCATGGatgcccgtcacctccctccgcaagccctgcgctcggcctcctgaagtcgcaatctgcgtcgcctgaactaccgcgcacttagaagcaaaagcaaaagcaacggcaacggcaacggctctgtcagagcagacatttcgccattaaacagcggcatgaattatccggcgattaggcccgcgacccaaatgcatactttc                             >  1:506116‑M2/1‑31 (MQ=255)                                                                                                                                                                                                         cAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCATGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAgcgcagcgcaag                                                                                                                                  <  2:704702/126‑3 (MQ=17)                                                                                                                                                                                                         cAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCg                                                                                                           <  2:370362/149‑1 (MQ=32)                                                                                                                                                                                                         cAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGaa                    <  1:1006440/236‑1 (MQ=40)                                                                                                                                                                                                                  cGGAGGGAGGTGACGGGCATGGatgcccgtcacctccctc                                                                                                                                                                                                                >  2:972183‑M2/1‑22 (MQ=255)                                                                                                                                                                                                                   ggAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCCATCCCTTTCATGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAg          >  1:1109713/1‑236 (MQ=255)                                                                                                                                                                                                                            tGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGAccc  >  1:211557/1‑235 (MQ=255)                                                                                                                                                                                                                                      ggATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAATGACTCGCCGTAAGGGc                                                       <  2:1022246/172‑1 (MQ=14)                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                 GAATTCGAGGCGTCATTATGCGGAGTCACCGGCCAGTACAGTCAATGGAAATAACAAGGCAAAACTGTACTGTGCTGTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCG‑‑‑‑‑‑TTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCC  >  AE015451/4907802‑4908249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.