New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 3585335 =61 (0.990)3 (0.050) 3/326 NT 5.4% coding (348/762 nt) benD 1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
?AE015451 3585374 = 47 (0.800)coding (387/762 nt) benD 1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase

GCTCACCCTCACCGCCGACCTGGAACAACACGCCGATTGCGCCCGGGTCATGGCCAGCGCGGTGGAAACCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCA  >  AE015451/3585140‑3585566
                                                                                                                                                                                                                                          |                                                                                                                                                                                                
gCTCACCCTCACCGCCGACCTGGAACAACACGCCGATTGCGCCCGGGTCATGGCCAGCGCGGTGGAAACCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTg                                                                                                                                                                                                 <  1:973187/236‑1 (MQ=255)
          accGCCGACCTGGAACAACACGCCGATTGCGCCCGGGTCATGGCCAGCGCGGTGGAAACCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGgc                                                                                                                                                                                               <  1:205060/228‑1 (MQ=255)
                 aCCTGGAACAACACGCCGATTGCGCCCGGGTCATGGCCAGCGCGGTGGAAACCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTc                                                                                                                                                                                      <  2:739486/230‑1 (MQ=255)
                   cTGGAACAACACGCCGATTGCGCCCGGGTCATGGCCAGCGCGGTGGAAACCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGt                                                                                                                                                                                 >  2:959088/1‑233 (MQ=255)
                               gCCGATTGCGCCCGGGTCATGGCCAGCGCGGTGGAAACCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTa                                                                                                                                                                   <  1:773179/235‑1 (MQ=255)
                                            gggTCATGGCCAGCGCGGTGGAAACCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAAc                                                                                                                                                     >  1:669873/1‑236 (MQ=255)
                                                    gCCAGCGCGGTGGAAACCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCcgc                                                                                                                                                              >  2:409160/1‑219 (MQ=255)
                                                     ccAGCGCGGTGCAAACCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGtct                                                                                                                                                                               <  1:1033690/201‑1 (MQ=255)
                                                          gcgGTGGAAACCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTa                                                                                                                                                                   <  2:1126585/208‑1 (MQ=255)
                                                           cgGTGGAAACCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACgg                                                                                                                                       >  1:988986/1‑235 (MQ=255)
                                                            ggTGGAAACCCAAGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACGCGCTCGAGCGTGGCCGTGGCGCCATCGTCAATgc                                                                                                                                                                                 >  2:633230/1‑191 (MQ=255)
                                                              tGGAAACCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCa                                                                                                                                   <  1:23276/236‑1 (MQ=255)
                                                                 aaaCCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCcg                                                                                                                                                               >  2:834191/1‑205 (MQ=255)
                                                                   aCCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCa                                                                                                                                                                         <  2:441084/193‑1 (MQ=255)
                                                                   aCCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCaa                                                                                                                              <  1:63708/236‑1 (MQ=255)
                                                                           ccgccTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCgcggcg                                                                                                                                                          >  1:1034217/1‑200 (MQ=255)
                                                                           ccgccTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTgg                                                                                                                        >  1:497375/1‑234 (MQ=255)
                                                                                 ggACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGccc                                                                                                                                                                                           >  2:628884/1‑160 (MQ=255)
                                                                                      tgcgaaggcgaggcaggcagtgagcgcgttgacgccacccttggctgcgccgtaaggcacacggttgacgccgcgggtagcgatggacgagacattgacgatggcgccactgccacgctcgagcatgtacggcagcgcggcgtggcagTg                                                                                                                                                                                                 <  2:174595‑M2/2‑1 (MQ=255)
                                                                                        cgggTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAg                                                                                                                                  <  2:795985/209‑1 (MQ=255)
                                                                                        cTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCa                                                                                                          <  1:990613/235‑1 (MQ=255)
                                                                                            tCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCaa                                                                                                                  >  1:557301/1‑223 (MQ=255)
                                                                                            tCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCActgc                                                                                                      >  1:671905/1‑235 (MQ=255)
                                                                                               acaacGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGc                                                                                                                       <  2:397988/215‑1 (MQ=255)
                                                                                               acaacGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGc                                                                                                                       >  1:397989/1‑215 (MQ=255)
                                                                                                                             ccTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCCTCGTCCATGGCTCGTCCATCGCCACCCGCGGCGTCCACCGTGTGCCTTa                                                                                                                                          >  2:158302/1‑166 (MQ=255)
                                                                                                                              cTTCGAGCACTACGAAGGCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCActgcct                                                                                                    <  1:701845/203‑1 (MQ=255)
                                                                                                                                   tgcgccgtaaggcacacggttgacgccgcgggtagcgatggacgagacattgacgatggcgccaCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCgtg                                                                                                                                                 <  2:469528‑M1/89‑1 (MQ=255)
                                                                                                                                   aGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATc                                                                                                                                                                       <  2:635698/131‑1 (MQ=255)
                                                                                                                                      gccgtaaggcacacggttgacgccgcgggtagcgatggacgagacattgacgatggcgccactgccacgctcgagcatgtacggcagcgcggcgtggcagTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGcc                                                                                                                                             <  1:1100291‑M2/54‑1 (MQ=255)
                                                                                                                                        tACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCa                                                                      <  2:669872/223‑1 (MQ=255)
                                                                                                                                             ggcacacggttgacgccgcgggtagcgatggacgagacattgacgatggcgccaCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGgc                                                                                                                                      <  1:1100291‑M1/100‑1 (MQ=255)
                                                                                                                                                 cacggttgacgccgcgggtagcgatggacgagacattgacgatggcgccactgccacgctcgagcatgtacggcagcgcggcgtggcagTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCa                                                                                                                                   <  2:469528‑M2/64‑1 (MQ=255)
                                                                                                                                                     aGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCaa                                                                                                                              >  2:505517/1‑154 (MQ=255)
                                                                                                                                                     aGATCGAGGCCGAGGTGCGCCCCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGTCAGTGGCGCCATCGTCAATGTATCGTCCATCGCTACCCGCGGCGTCAACCGTGTGcc                                                                                                                                             >  2:905695/1‑139 (MQ=255)
                                                                                                                                                       aTCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGc                                                                                                                                 >  2:247622/1‑149 (MQ=255)
                                                                                                                                                       aTCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCgc                                                                                       >  2:914503/1‑190 (MQ=255)
                                                                                                                                                              gcgggtggcgatggacgagacattgacgagggcgccactgccacgctcgagcatgtccggcagcgcggcgtggcagGGGCGCCATCGTCAATGTCTCGTCCATCGCTAcc                                                                                                                                                                 <  2:254250‑M2/34‑1 (MQ=255)
                                                                                                                                                                 ggtagcgatggacgagacattgacgatggcgcccCTGCCACGCCGCGCTGCCGGACATGCTCGAGCGTGGCAGTGGCGCCCTCGTCAATGTCTCGTCCATCGCCACCcgc                                                                                                                                                              <  2:254250‑M1/76‑1 (MQ=255)
                                                                                                                                                                 aGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCcgg                                             <  1:9582/223‑1 (MQ=255)
                                                                                                                                                                   gTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCAcc                              <  1:959089/236‑1 (MQ=255)
                                                                                                                                                                    tGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGGAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCggcggccc                                       >  1:105364/1‑224 (MQ=255)
                                                                                                                                                                         cgctcgctGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCAcc                              <  2:557300/230‑1 (MQ=255)
                                                                                                                                                                         cgctcgctGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGGACATGCTCGAGCGTGGCCGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTATGGCGCAGCCAAGGGTg                                                                                                                         >  2:944502/1‑139 (MQ=255)
                                                                                                                                                                                     cccACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACcgcg            <  1:834192/236‑1 (MQ=255)
                                                                                                                                                                                      ccACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACcgc             <  2:988985/234‑1 (MQ=255)
                                                                                                                                                                                        gcccTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCAcc                              <  2:882488/214‑1 (MQ=255)
                                                                                                                                                                                            tggggtgCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCgcggc                                                                                                                                                           <  2:648323/83‑1 (MQ=255)
                                                                                                                                                                                               ggtgCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCAc                                                      <  1:500253/184‑1 (MQ=255)
                                                                                                                                                                                               ggtgCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCAc                                                      >  2:500252/1‑184 (MQ=255)
                                                                                                                                                                                                 tgctgcCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGcc                                                                                                                                             <  2:629569/95‑1 (MQ=255)
                                                                                                                                                                                                 tgctgcCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGcc                                                                                                                                             >  1:629570/1‑95 (MQ=255)
                                                                                                                                                                                                 tgctgcCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCa  >  1:905037/1‑234 (MQ=255)
                                                                                                                                                                                                 caCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTCGCCTtcgca                                                                                      <  2:174595‑M1/148‑3 (MQ=255)
                                                                                                                                                                                                    TGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCCTCCCCGTCAACGc                                                         <  2:194463‑M1/176‑1 (MQ=255)
                                                                                                                                                                                                      tgaCGCCGCGCTGCCGTACATGCTCGAGCGAGGGAGTGGCGCCATCGTCAATGTCTCGTCCATCGCGAccc                                                                                                                                                                >  1:1013460/3‑71 (MQ=255)
                                                                                                                                                                                                       CACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGAGGCGTCAACGCGCTCACTGCCTGCCTCGCTTTCGAAAacgc                                                                                 <  2:290481‑M1/149‑1 (MQ=255)
                                                                                                                                                                                                         CGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCCTCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCCtgtg                                                                                                                                               <  2:13093‑M1/85‑1 (MQ=255)
                                                                                                                                                                                                           CCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCaa                                                            <  1:261119‑M1/166‑1 (MQ=255)
                                                                                                                                                                                                                cTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCCCTGCGCCcggcg                                           >  2:1025908/1‑178 (MQ=255)
                                                                                                                                                                                                                 ggCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTCCCCGCGGCGTCACCCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAAc        <  1:279683/211‑1 (MQ=255)
                                                                                                                                                                                                                         aggcgcgggcgtggcagTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTa                 <  2:722880‑M2/178‑1 (MQ=255)
                                                                                                                                                                                                                             tCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTa                 <  1:381417/191‑1 (MQ=255)
                                                                                                                                                                                                                                   gtggcagTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCgccggc                                                                             >  2:151917‑M2/8‑125 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                
GCTCACCCTCACCGCCGACCTGGAACAACACGCCGATTGCGCCCGGGTCATGGCCAGCGCGGTGGAAACCCATGGCCGCCTGGACATCCTGGTCAACAACGTGGGCGGCACCATCTGGGCCAAGCCCTTCGAGCACTACGAAGTCGAGCAGATCGAGGCCGAGGTGCGCCGCTCGCTGTTCCCCACCCTGTGGTGCTGCCACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCA  >  AE015451/3585140‑3585566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.