Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	965535	965729	195	19 [18]	[18] 19	ptxC	putative phosphonate transport system permease protein PtxC

GTTGGCCGTTGCAAGGGGCCGCGCGTTTGCTGCTCAATGCCTTGCGTGCCATTCCTGAACTGGTGTGGGCAGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCTTGTACCGCTGGGAGAACAACATCCGCATGGCCAGC  >  AE015451/965299‑965621                                                                                                                                                                                                                                            |                                                                                        gTTGGCCGTTGCAAGGGGCCGCGCGTTTGCTGCTCAATGCCTTGCGTGCCATTCCTGAACTGGTGTGGGCAGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGgcggcg                                                                                         <  1:799963/236‑1 (MQ=255)            cAAGGGGCCGCGCGTGTGCTGCTCAATGCCTTGCGTGCCATTCCTGAACTGGTGTGGGCAGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTgg                                                                              <  1:719783/236‑1 (MQ=255)                                                                tgtgGGCAGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGGTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGCTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGc                                                       <  2:425575/207‑1 (MQ=255)                                                                  tgGGCAGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCt                                                                        >  1:211979/1‑188 (MQ=255)                                                                  tgGGCAGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCt                                                                        <  2:211979/188‑1 (MQ=255)                                                                    ggCAGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCTTGTACCGCTGGgaga                      >  1:25967/1‑236 (MQ=255)                                                                                               gctgggGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCTTGTACCGCTGGGAGaaca                   <  2:25967/212‑1 (MQ=255)                                                                                                   gggCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCTTGTACCGCt                            <  1:1019089/199‑1 (MQ=255)                                                                                                         aaTGCCGGTCACCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTgg                                                                              <  1:384223/143‑1 (MQ=255)                                                                                                                     cTGGCTGTGGCGTTGCACACCGGTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCGCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGtt                                                   <  2:100785/158‑1 (MQ=255)                                                                                                                           ttGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCTTGTACCGCTGGGAGAACAACATCCGCATGGCCAGc  >  1:1117570/1‑201 (MQ=255)                                                                                                                              gCGTTGCACCCCGCTGGCGGGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCtt                                    <  2:113920/164‑1 (MQ=255)                                                                                                                                        ccGGTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTgg                                                                              <  2:790490/112‑1 (MQ=255)                                                                                                                                                      gggCGTTTGTTTGCCGAGGCGCTTGAGAACGCCGCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCAGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCt                                           >  2:603278/1‑133 (MQ=255)                                                                                                                                                      gggCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCt                                           <  1:603279/133‑1 (MQ=255)                                                                                                                                                          gtttgtttGCCGAGGCGCTTGCGAACGCCCCGCCCGAGCCGGCGGCGGCGTTCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGtt                                                                                       <  2:660274/85‑1 (MQ=255)                                                                                                                                                                                              ggCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTGCCCTGCCCAGCCTGTGGCCGCAGTTGCTgg                                              <  2:233494/89‑1 (MQ=255)                                                                                                                                                                                                   gcggcggcgATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGGACCCTGCCCAACCTGTGGcc                                                         <  1:320852/74‑1 (MQ=255)                                                                                                                                                                                                             tCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAg                                                     <  1:353378/68‑1 (MQ=255)                                                                                                                                                                                                                                            |                                                                                        GTTGGCCGTTGCAAGGGGCCGCGCGTTTGCTGCTCAATGCCTTGCGTGCCATTCCTGAACTGGTGTGGGCAGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCTTGTACCGCTGGGAGAACAACATCCGCATGGCCAGC  >  AE015451/965299‑965621

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑