Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	1544242	1544484–1544457	216–243	21 [18]	[18] 19	[mdfA]	[mdfA]

CTGGTGCGTGGCGCGCTCTGGCCATACCTGGCTGGCCTGTGCCTGATGGTGCTGGCGACCTGGTACTGGCCGAGCGTGACCAGTGTGGTGGCCGGCATGTCGCTGTACGCGCTGGGGTTGGGCGTGGCCAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCC  >  AE015451/1544070‑1544389                                                                                                                                                                            |                                                                                                                                                     cTGGTGCGTGGCGCGCTCTGGCCATGCCTGGCTGGCCTGTGCCTGATGGTGCTGGCGACCTGGTACTGGCCGAGCGTGACCAGTGTGGTGGCCGGCATGTCGCTGTACGCGCTGGGGTTGGGCGTGGCCAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACaga                                                                                                                                                      <  2:266155/172‑1 (MQ=255)                  ctGGCCATACCTGGCTGGCCTGTGCCTGATGGTGCTGGCGACCTGGTACTGGCCGAGCGTGACCAGTGTGGTGGCCGGCATGTCGCTGTACGCGCTGCGGTTGGGCGTGCCCAATGCAGTGCTGTACCGCATGACGTTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTc                                                                                                                                      <  2:627796/171‑1 (MQ=255)                         tACCTGGCTGGCCTGTGCCTGATGGTGCTGGCGACCTGGTACTGGCCGAGCGTGACCAGTGTGGTGGCCGGCATGTCGCTGTACGCGCTGGGGTTGGGCGTGGCCAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTc                                                                                                                                      <  2:309273/164‑1 (MQ=255)                                              ttGGTGCTGGCGACCTGGTACTGGCCGAGCGTGACCAGTGTGGTGGCCGGCATGTCGCTGTACGCGCTGGGGTTGGGCGTGGCCAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCgat                                                                          <  2:616819/202‑1 (MQ=255)                                                 gTGCTGGCGACCTGGTACTGGCCGAGCGTGACCAGTGTGGTGGCCGGCATGTCGCTGTACGCGCTGGGGTTGGGCGTGGCCAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGa                                                                                                               <  2:35644/163‑1 (MQ=255)                                                               gTACTGGCCGAGCGTGACGAGTGTGGTGGCCGGCATGTCGCTGTACGCGCTGGGGTTGGGCGTGGCCAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCtt                                                     <  1:343884/207‑1 (MQ=255)                                                                      ccGAGCGTGACCAGTGTGGTGGCCGGCATGTCGCTGGACGCGCTGGGGTTGGGCGGGGCCAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACAGGGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGa                                                                                                               <  2:774509/142‑1 (MQ=255)                                                                        gAGCGTGACCAGTGTGGTGGCCGGCATGTCGCTGTACGCGCTGGGGTTGGGCGTGGCCAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACaga                                                                                                                                                      >  2:1125004/1‑101 (MQ=255)                                                                        gAGCGTGACCAGTGTGGTGGCCGGCATGTCGCTGTACGCGCTGGGGTTGGGCGTGGCCAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACaga                                                                                                                                                      <  1:1125005/101‑1 (MQ=255)                                                                         aGCGTGACCAGTGTGGTGGCCGGCATGTCGCTGTACGCGCTGGGGTTGGGCGTGGCAAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACCGAGCAAGGGGCTGGTTTc                                                                                                                                      <  2:850896/116‑1 (MQ=255)                                                                                    tgtgGTGGCCGGCATGTCGCTGTACGCGCTGGGGTTGGGCGTGGCCAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCAtttt                                           <  1:468246/196‑1 (MQ=255)                                                                                        gtggCCGGCATGTCGCTGTACGCGCTGGGGTTGGGCGTGGCCAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGAtt                                                                                                             >  1:800200/1‑126 (MQ=255)                                                                                        gtggCCGGCATGTCGCTGTACGCGCTGGGGTTGGGCGTGGCCAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGAtt                                                                                                             <  2:800199/126‑1 (MQ=255)                                                                                         tggCCGGCATGTCGCTGTACGCGCTGGGGTTGGGCGTGGCCAATGCAGGGCTGTACCGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGgat                                                                                                                       <  2:863553/115‑1 (MQ=255)                                                                                                               gcTGGGGTTGGGCGTGGCCAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGGTCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCAtttt                                           <  2:862549/169‑1 (MQ=255)                                                                                                                   gggTTGGGCGTGGCCAGTGCAGTGCTGTACCGCATGACGGTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCAtttt                                           <  2:1122364/165‑1 (MQ=255)                                                                                                                                                 cGCATCACGGTGATATCCAGCGAATAGAGCAAGGGGCTGATTTCGGCCATGCTGGGGATGATGACGATTGCCt                                                                                                         <  2:740805/73‑1 (MQ=255)                                                                                                                                                   cATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTg                                                                                                                            <  2:788632/52‑1 (MQ=255)                                                                                                                                                      gACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGc                                                                                           >  2:210220/1‑82 (MQ=255)                                                                                                                                                      gACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGcc  <  1:928462/171‑1 (MQ=255)                                                                                                                                                      gACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGcc  >  2:928461/1‑171 (MQ=255)                                                                                                                                                                            |                                                                                                                                                     CTGGTGCGTGGCGCGCTCTGGCCATACCTGGCTGGCCTGTGCCTGATGGTGCTGGCGACCTGGTACTGGCCGAGCGTGACCAGTGTGGTGGCCGGCATGTCGCTGTACGCGCTGGGGTTGGGCGTGGCCAATGCAGTGCTGTACCGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCC  >  AE015451/1544070‑1544389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑