Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	2095153	2095332	180	19 [17]	[17] 19	[alaA]	[alaA]

AACAACAGAATGCGCATCATGGTTGTTACGTTCTCCTGACGGATGAGTTGTCGCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTGCGCCCCACCACCACCCCCGCGTCG  >  AE015451/2094930‑2095231                                                                                                                                                                                                                               |                                                                                aacaacAGAATGCGCATCATGGTTGTTACGTTCTCCTGACGGATGAGTTGTCGCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAgtggtgt                                                                     <  1:670766/235‑1 (MQ=255)               catcatGGTTGTTACGTTCTCCTGACGGATGAGTTGTCGCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTATGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAgtggt                                                                       <  1:1132780/219‑1 (MQ=255)                                     tGACGGATGAGTTGTCGCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCa                                                                             <  2:436918/191‑1 (MQ=255)                                                     gCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGAt                             <  1:161707/223‑1 (MQ=255)                                                        tACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTGCGCCccaccacca             <  1:977211/236‑1 (MQ=255)                                                           tGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTGCGCCccac                  <  1:311611/228‑1 (MQ=255)                                                              ggggTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAgtg                                                                         <  2:679723/170‑1 (MQ=255)                                                                    tataAGGTGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGGGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGc                                                                                 <  1:9609/156‑1 (MQ=255)                                                                     ataAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGAt                             <  1:54121/207‑1 (MQ=255)                                                                         ggggCCTGCCGCGCCGATTCAATCGGTGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTGCGCCccaccacca             <  1:324806/219‑1 (MQ=255)                                                                                 ccGGGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAgtggt                                                                       <  2:644843/153‑1 (MQ=255)                                                                                              aTCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCtc                          <  1:1040577/185‑2 (MQ=255)                                                                                                                    tgtACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCcgcgcg                                          <  1:146868/147‑1 (MQ=255)                                                                                                                    tgtACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTgcgc                       <  1:1095611/166‑1 (MQ=255)                                                                                                                           gggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGc                                                                                 <  2:559260/100‑1 (MQ=255)                                                                                                                                 aTGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATc                            >  2:1095610/1‑148 (MQ=255)                                                                                                                                             ggCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTGCGCCCCACCACCACCCCCGCGTCg  <  2:439218/162‑1 (MQ=255)                                                                                                                                                       cTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTc                                >  1:1113695/1‑122 (MQ=255)                                                                                                                                                       cTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTc                                <  2:1113694/122‑1 (MQ=255)                                                                                                                                                                                                                               |                                                                                AACAACAGAATGCGCATCATGGTTGTTACGTTCTCCTGACGGATGAGTTGTCGCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTGCGCCCCACCACCACCCCCGCGTCG  >  AE015451/2094930‑2095231

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑