Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	1421685	1422125	441	19 [18]	[18] 19	PP_1246	conserved exported protein of unknown function

TTGTGCCGCCCGCTCCGGCACCTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTGAGCCTGCGGTAAAGGACAAGGCCGTTTCTTATCTTACGCCGCAAGCTGACCAGGCCGCGTTC  >  AE015451/1421976‑1422358                                                                                                                                                       |                                                                                                                                                                                                                                         ttgtGCCGCCCGCTCCGGCACCTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAgg                                                                                                                                                                        >  1:50341/1‑217 (MQ=255)            gcTCCGGCACCTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAACTCAGCTGGAAGGCt                                                                                                                                            >  1:520517/1‑234 (MQ=255)                                     ccgcAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCg                                                                                                                                                                                     <  2:50341/168‑1 (MQ=255)                                                              tCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTg                                                                                        >  1:371450/1‑236 (MQ=255)                                                               cGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCa                                                                                                                                                       >  1:446073/1‑172 (MQ=255)                                                                             ggAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGCGAAGGCAGCTTCGACAAACTCAGCt                                                                                                                                                    >  2:128144/1‑161 (MQ=255)                                                                                      cAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTg                                                                >  1:251876/1‑236 (MQ=255)                                                                                               gCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTGAGCCTGCgg                                                       >  1:8075/1‑236 (MQ=255)                                                                                                               aCCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGc                                                                                                   >  1:797597/1‑176 (MQ=255)                                                                                                                           tGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTGAGCCTGCGGTAAAGGACAAGGCCGTTtcttatct                              >  2:673401/1‑233 (MQ=255)                                                                                                                                 cTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTg                                                                                        >  1:634343/1‑169 (MQ=255)                                                                                                                                 cTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTg                                                                                        <  2:634342/169‑1 (MQ=255)                                                                                                                                       aCCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCCTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCAccc                                                                                             >  1:808232/1‑158 (MQ=255)                                                                                                                                         cTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTGAGCCTGCGGTAAAGGACAAGGCCgg                                       >  1:540598/1‑209 (MQ=255)                                                                                                                                                   ggCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGtt                                                                                                        <  2:835628/135‑1 (MQ=255)                                                                                                                                                   ggCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGtt                                                                                                        >  1:835629/1‑135 (MQ=255)                                                                                                                                                   ggCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTGAGCCTGCGGTAAAGGACAAg                                            >  1:365440/1‑195 (MQ=255)                                                                                                                                                     cGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTGAGCCTGCGGTAAAGGACAAGGCCGTTTCTTATCTTACGCCGCAAGCTGACCAGGCCGCGTTc  >  1:895230/1‑235 (MQ=255)                                                                                                                                                       aTGGCGCCCCCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTGAGc                                                             <  2:251875/174‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                                                                                                         TTGTGCCGCCCGCTCCGGCACCTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTGAGCCTGCGGTAAAGGACAAGGCCGTTTCTTATCTTACGCCGCAAGCTGACCAGGCCGCGTTC  >  AE015451/1421976‑1422358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑