Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	2388175	2388381	207	21 [16]	[18] 21	[pyrD]	[pyrD]

GCAGCTGATGAGGTTTGCCAAGGCATAAAAAAGGGCCCCTTCAAGGGGCCCCTGGGCCTTCGCCCGCCGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGCGAACAGAAGGAAGATTGAAGGGGCAAAGTTCGCGGGATTTGCCGGTGACCCCGTATTGGTAGCCACGTGAATATGCTCTTTCCAACGGATCACGCTTAA  >  AE015451/2388295‑2388612                                                                                        |                                                                                                                                                                                                                                       gCAGCTGATGAGGTTTGCCAAGGCATAAAAAAGGGCCCCTTCAAGGGGCCCCTGGGCCTTCGCCCGCCGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGCGAACAGAAGGAAGATTg                                                                                    >  1:630971/1‑236 (MQ=255)        atgaGGTTTGCCAAGGCATAAAAAAGGGCCCCTTCAAGGGGCCCCTGGGCCTTCGCCCGCCGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCGAGCCGTTGATCCAGGCTTGGCGAACAGAAGGAAGATTGagg                                                                                 >  1:459126/1‑230 (MQ=255)                    aaGGCATAAAAAAGGGCCCCTTCAAGGGGCCCCTGGGCCTTCGCCCGCCGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCCGGCTTGGCGAACAGAAGGAAGATTGAAGGGGCAAAGTTCGCgg                                                                  >  1:141598/1‑235 (MQ=255)                                     cccTTCAAGGGGCCCCTGGGCCTTCGCCCGCCGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGt                                                                                                                    >  1:477574/1‑168 (MQ=255)                                                    cTGGGCCTTCGCCCGCCGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGCGAACAGAAGGAAGATTGAAGGGGCAAAGTTCGCGGGATTTGCCGGTGACCCCGTATTGGTAGcc                                     >  2:968369/1‑232 (MQ=255)                                                     tGGGCCTTCGCCCGCCGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGCGAACAGAAGGAAGATTGAAGGGGCAAAGTTCGCGGGATTTGCCGGt                                                       >  1:686443/1‑213 (MQ=255)                                                     tGGGCCTTCGCCCGCCGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGCGAACAGAAGGAAGATTGAAGGGGCAAAGTTCGCGGGATTTGCCGGt                                                       >  1:855228/1‑213 (MQ=255)                                                     tGGGCCTTCGCCCGCCGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGCGAACAGAAGGAAGATTGAAGGGGCAAAGTTCGCGGGATTTGCCGGt                                                       <  2:686442/213‑1 (MQ=255)                                                     tGGGCCTTCGCCCGCCGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGCGAACAGAAGGAAGATTGAAGGGGCAAAGTTCGCGGGATTTGCCGGt                                                       <  2:855227/213‑1 (MQ=255)                                                        gCCTTCGCCCGCCGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAg                                                                                                                                                                                                            >  1:698726/1‑61 (MQ=255)                                                        gCCTTCGCCCGCCGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAg                                                                                                                                                                                                            <  2:698725/61‑1 (MQ=255)                                                               cccgccGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTg                                                                                                                                                                                                 >  2:532678/1‑65 (MQ=255)                                                               cccgccGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGCGAACAGAAGGAAGATTGAAGGGGCAAAGTTCGCGGGATTTGCCGGTGACCCCGTATTGGTAGCCACGTGAATATGct                        >  2:514248/1‑234 (MQ=255)                                                               cccgccGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGCGAACAGAAGGAAGATTGAAGGGGCAAAGTTCGCGGGATTTGCCGGTGACCCCGTATTGGTAGCCACGTGAATATGct                        >  2:526726/1‑234 (MQ=255)                                                                ccgccgCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGCGAACAGAAGGAAGATTGAAGGGGCAAAGTTCGCGGGa                                                                >  1:28913/1‑193 (MQ=255)                                                                                 cGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTcc                                                                                                                                                       >  1:528485/1‑89 (MQ=255)                                                                                 cGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTcc                                                                                                                                                       <  2:528484/89‑1 (MQ=255)                                                                                   tGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGCGAACAGAAGGAAGATTGAAGGGGCAAAGTTCGCGGGATTTGCCGGTGACCCCGTATTGGTAGCCACGTGAATATGCTCTTTCCAACGGATCACGCt     >  2:503723/1‑233 (MQ=255)                                                                                        ggTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGc                                                                                                     >  2:1057572/1‑132 (MQ=255)                                                                                        ggTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGc                                                                                                     <  1:1057573/132‑1 (MQ=255)                                                                                        ggTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGCGAACAGAAGGAAGATTGAAGGGGCAAAGTTCGCGGGATTTGCCGGTGACCCCGTATTGGTAGCCACGTGAATATGCTCTTTCCAACGGATCCCGCTTaa  >  2:493578/1‑231 (MQ=255)                                                                                        |                                                                                                                                                                                                                                       GCAGCTGATGAGGTTTGCCAAGGCATAAAAAAGGGCCCCTTCAAGGGGCCCCTGGGCCTTCGCCCGCCGCCCGGATGGGGCGTGCATGGTAAATCGAATTCAGTGTCCTCGTTCAGCCAACGGCGTGATTTTCGTTGAGTCTATGGATGCCAGCGGTGCCAGTCATTCCGTCCCAGTTATCACCGCGACCTTCACGCCAGCCGTTGATCCAGGCTTGGCGAACAGAAGGAAGATTGAAGGGGCAAAGTTCGCGGGATTTGCCGGTGACCCCGTATTGGTAGCCACGTGAATATGCTCTTTCCAACGGATCACGCTTAA  >  AE015451/2388295‑2388612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑