| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 2,256,290 | C→T | 17.6% | intergenic (+350/‑354) | asd → / → PP_1990 | Aspartate‑semialdehyde dehydrogenase/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 2,256,290 | 0 | C | T | 17.6% | 144.8 / 28.4 | 63 | intergenic (+350/‑354) | asd/PP_1990 | Aspartate‑semialdehyde dehydrogenase/transposase |
| Reads supporting (aligned to +/- strand): ref base C (30/21); new base T (4/7); total (34/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.90e-02 | |||||||||||
CGTTGCCGTTGCTTTTGCTTTTGCTTCTAAGTGCGCGGTAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCACGATGGCGACACATACTCACCTTT > AE015451/2256090‑2256521 | cgttgccgttgcTTTTGCTTTTGCTTCTAAGTGCGCGGTAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGt > 2:1108574/1‑228 (MQ=40) gttgccgttgcTTTTGCTTTTGCTTCTAAGTGCGCGGTAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGgatga < 2:1033504/213‑1 (MQ=40) tttgcttttgcttCTAAGTGCGCGGTAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCa > 2:1119278/1‑234 (MQ=255) ttCTAAGTGCGCGGTAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGttttt > 2:964112/1‑208 (MQ=35) ttCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAg < 2:553117/162‑1 (MQ=33) gCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATgg > 1:484770/1‑166 (MQ=33) cAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AATAAGGGACCCGCAGTa > 1:611098/1‑217 (MQ=255) gATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATgc > 1:122949/1‑236 (MQ=255) tCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAg > 1:440252/1‑207 (MQ=255) ggaggCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGCAGCGCAGGGGACGgag > 2:193153/1‑144 (MQ=21) ggggCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGCCccgccg < 2:416486/197‑1 (MQ=255) gaggCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGtga < 1:729803/235‑1 (MQ=255) gcgcAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCCGGGGCCGGATGATgg > 2:211131/1‑141 (MQ=21) gcAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATg > 2:655462/1‑211 (MQ=255) gcAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGAACCGACGTAAGGGCGGAAAgg > 1:40586/1‑203 (MQ=255) gtggCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGGCCGGAGCGAGGGGACCCCGGAGCGCAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCAc < 1:511695/161‑1 (MQ=255) gggCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTaa > 1:760139/1‑169 (MQ=255) gCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGgatg < 2:114447/109‑1 (MQ=32) gCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGgatg > 1:114447/1‑109 (MQ=32) gCACGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATCACTACTCGGGGTGa > 2:306873/1‑220 (MQ=255) aTGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAGGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGt < 1:774473/176‑1 (MQ=255) aTGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaag > 1:486586/1‑236 (MQ=255) ggATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCAc < 2:336945/140‑1 (MQ=255) ggATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCAc > 1:336946/1‑140 (MQ=255) ggATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGgt > 1:1069021/1‑212 (MQ=255) ctGCCCGTCAAGCGCTG‑GGCGCCAGGGTGGGGCCTGCAGCGCGGTCCTCCCGGGAGCCAGCCCGGAGTGAGGGGAACCCGGAGTGTAGCGTAGGGGCCGGTTGATGGGAGCCGAGGGTTTTTGGTTCCTTTTTGCCAc < 1:386632/137‑1 (MQ=11) tGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAggg < 2:1041889/148‑1 (MQ=255) tGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAggg > 1:1041890/1‑148 (MQ=255) ccGTCAAGCGCTG‑GGCCCCAGGATGGGGCCGGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGtga < 1:1115390/189‑1 (MQ=255) cGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGGGCAGTCCGGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTACTTTTTGCCACGAC‑AAAAAg < 2:596846/142‑1 (MQ=17) tCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGGCCGGAGCGAGGGGACCCCGGAGCGCAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACg < 2:20909/132‑1 (MQ=255) aaGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGAAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAg < 2:760138/139‑1 (MQ=14) aaGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCca > 2:940185/1‑212 (MQ=255) ggcTG‑GGTCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCt < 1:801438/174‑1 (MQ=255) ggCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCt < 2:980075/186‑1 (MQ=255) ccccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTg < 2:452476/169‑1 (MQ=255) cccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTc > 1:701040/1‑187 (MQ=255) cccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCca > 2:795901/1‑207 (MQ=255) aGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGt > 2:794676/1‑149 (MQ=255) aGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGt < 1:794677/149‑1 (MQ=255) ggcgcGGTCCTCCGGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAgg < 2:320186/56‑1 (MQ=255) aGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGCAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCAc < 2:461160/101‑1 (MQ=11) aGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGCAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCAc > 1:461161/1‑101 (MQ=11) aGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCg > 2:208007/1‑76 (MQ=40) gcgcGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGCATACCTACTCGGCGTGAATGCCCACATCcaagaagcaagaagc > 1:351929/1‑202 (MQ=255) gcgcGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCt > 2:603895/1‑233 (MQ=255) gcgcGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGACGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAAt > 1:619913/1‑178 (MQ=255) tcctccCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGAc > 2:22368/1‑71 (MQ=255) tcctccCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGgt > 2:157524/1‑166 (MQ=255) tcctccCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGAc > 1:256560/1‑235 (MQ=255) cccGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGc < 1:940186/236‑1 (MQ=255) ggAGCAAGCCCGGAGGGAGGGGACCCGGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGTTTTTTGGTTCCTTTTTGCCACAACAAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTa < 2:866855/153‑1 (MQ=18) ggAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGtga < 2:784371/141‑1 (MQ=255) aGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCttttt > 2:1029822/1‑79 (MQ=255) aGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCttttt < 1:1029823/79‑1 (MQ=11) aGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCttttt < 1:871210/79‑1 (MQ=11) aGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCttttt > 2:871209/1‑79 (MQ=255) ccGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATc > 2:563668/1‑164 (MQ=255) ggACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCACg < 1:1108575/228‑1 (MQ=255) cccGGAGCGTAGCGCAGGGGCGGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCg < 1:101747/209‑1 (MQ=255) cGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaagcaagaagcaagaagcaagaagc > 2:755356/1‑176 (MQ=255) cGTAGAGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACACCcaagaagcaagaagca < 2:815671/158‑1 (MQ=255) tAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGc < 1:964113/199‑1 (MQ=255) gcgcAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCACGATGGCGACACATACTCACCttt > 1:938280/1‑235 (MQ=255) | CGTTGCCGTTGCTTTTGCTTTTGCTTCTAAGTGCGCGGTAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGAC‑AAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCACGATGGCGACACATACTCACCTTT > AE015451/2256090‑2256521 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |