| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 3,142,272 | C→T | 100% | A74V (GCG→GTG) | PP_2758 → | putative Ribose ABC transporter, periplasmic ribose‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 3,142,272 | 0 | C | T | 98.6% | 219.8 / ‑6.1 | 59 | A74V (GCG→GTG) | PP_2758 | putative Ribose ABC transporter, periplasmic ribose‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (29/28); minor base G (1/1); total (30/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
GTGACCAATGAGTGACAACGACTGCTCCGGCATGTCCCGGCGCTGCCTGCTCGGCGCGTCCTCGGCGATGCTCGCTCTCGGGCTTGCCGCACCATTGACCCGCGCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGCGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAGCGCATCAGCGCCGCCGGCATCCCGCTGTTCACCATCGAGGTGCCGTCGCAGTACGCGGT > AE015451/3142045‑3142494 | gTGACCAATGAGTGACAACGACAGCTCCGGCATGTCCCGGCGCTGCCTGCTCGGCGCGTCCTCGGCGATGCTCGCTCTCGGGCTTGCCGCACCATTGTCCCGCGCCATGGCGGCTGGAGCCGTTAGCGGTGCCGAGGCCAGCGCCACAGTACCTTCGCTGAAGGGCAAGCGCAGCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAgg < 2:1072465/233‑1 (MQ=255) aaTGAGTGACAACGACTGCTCCGGCATGTCCCGGCGCTGCCTGCTCGGCGCGTCCTCGGCGATGCTCGCTCTCGGGCTTGCCGCACCATTGACCCGCGCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTCCAGGTCGAGGac > 1:1101104/1‑234 (MQ=255) gcTCGGCGCGTCCTCGGCGATGCTCGCTCTCGGGCTTGCCGCACCATTGACCCGCGCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCAGGgc > 1:1119513/1‑236 (MQ=255) ggCGCGTCCTCGGCGATGCTCGCTCTCGGGCTTGCCGCACCATTGACCCGCGCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCaa < 1:437645/236‑1 (MQ=255) cccGGCGATGCTCGCTCTCGGGCTTGCCGCACCATTGACCCGCGCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGaa < 1:169703/179‑1 (MQ=255) ggCGATGCTCGCTCTCGGGCTTGCCGCACCATTGACCCGCGCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAAc < 2:608332/226‑1 (MQ=255) aTGCTCGCTCTCGGGCTTGCCGCACCGTTGACCCGCGCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGAt < 1:1031198/210‑1 (MQ=255) cGCACCATTGACCCGCGCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTgg < 1:775354/236‑1 (MQ=255) gCACCATTGACCCGCGCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGt > 1:345829/1‑215 (MQ=255) aCCATTGACCCGCGCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTg > 1:582805/1‑235 (MQ=255) cATTGACCCGCGCCATGGCGGCTGGGGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAgg < 2:255383/141‑1 (MQ=255) gACCCGCGCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGa < 2:939915/209‑1 (MQ=255) gACCCGCGCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCGTCGCTGAAGGGCAAGCGCAGCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCGTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACaa < 2:277565/198‑1 (MQ=255) ccGCGCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAgg < 2:327077/134‑1 (MQ=255) ccGCCCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAg < 1:283273/211‑1 (MQ=255) gcCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCg < 1:823071/235‑1 (MQ=255) ccATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGAt < 1:273973/236‑1 (MQ=255) cATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATg < 1:321123/236‑1 (MQ=255) aTGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGAc < 2:1000027/200‑1 (MQ=255) aTGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGc > 1:463301/1‑236 (MQ=255) cggcTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGtt > 1:598998/1‑236 (MQ=255) gACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACAccc < 1:470987/235‑1 (MQ=255) gCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGGGCAGGTCGAGGAAGTACAGCGCCTgg > 1:238445/1‑129 (MQ=255) cGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGc > 2:779583/1‑235 (MQ=255) gTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGc < 2:463300/233‑1 (MQ=255) aGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGc > 1:371989/1‑236 (MQ=255) cAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCTTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATg < 1:1048834/163‑1 (MQ=255) gTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAACCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCatcatc > 1:272168/1‑236 (MQ=255) gCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCACCGACAAGGca > 2:85060/1‑155 (MQ=255) gCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTAGGCACGCTGAGCATCATCGa > 1:478206/1‑236 (MQ=255) cacaGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGc > 1:339726/1‑236 (MQ=255) caCCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGTCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGcc < 1:913255/186‑1 (MQ=255) tCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGGCGGGCGCAACGACAAGGCCATGGt > 2:108349/1‑149 (MQ=255) cGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCg < 1:80797/183‑1 (MQ=255) tGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAgc > 2:980315/1‑234 (MQ=255) gCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGc > 2:241708/1‑150 (MQ=255) gCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAg > 1:8086/1‑227 (MQ=255) gcgcATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCg < 2:437374/170‑1 (MQ=255) gcgcATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGCGCATCATCGAGCCCTg > 1:878895/1‑216 (MQ=255) gcgcATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAGCGCATCAgcgc < 1:443281/234‑1 (MQ=255) cATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAGCGCATCAGCGCCGCCGGCATc < 1:980316/235‑1 (MQ=255) ccccGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTg < 2:179456/119‑1 (MQ=255) gggCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCaa < 2:648909/99‑1 (MQ=255) gggCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCaa > 1:648910/1‑99 (MQ=255) gggCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAGCGCATCAGCGCCGCCGGCATCCCGCTGTTCAcc > 1:985577/1‑235 (MQ=255) gggCACCAGCATCTACTTCGACAGCCGGGCCTTAAAGGTTCAGGTCGAGGAAGTACAGCGCCTGGGAGGCACGc > 2:1135293/1‑74 (MQ=255) ggCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAGCGCATCAGCGCCGCCGGCATCCCGCTGTTCACCa > 1:774682/1‑235 (MQ=255) gCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAGCGCATCAGCGCCGCCGGCATccc > 2:38523/1‑223 (MQ=255) gCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAGCGCATCAGCGCCGCCGGCATCCCGCTGTTCACCATc > 1:985172/1‑236 (MQ=255) aTCTACTTCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAgcgc > 2:726642/1‑195 (MQ=255) tcgaCTGCGACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAGCGCATCAgcgc < 1:334926/199‑1 (MQ=255) gACAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAGCGCATCAGCGCCGCCGGCATCCCGCTGTTCACCATCGAGGTGCCGTCGCAGTa > 1:593034/1‑236 (MQ=255) cAGCCGGGCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAGCGCATCAGCGCCGCCGGCATCCCGCTGTTCACCATCGAGGTGCCGTCGCAGTa < 1:1126620/234‑1 (MQ=255) aGCCGGGCCTTCAAGGGGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCCATCACCTTGGATGCCGGGCGCAACGACaa < 2:238444/83‑1 (MQ=255) gggCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAGCGCATCAGCGCCGCCGGCATCCCGCTGTTCACCATCGAGGTGCCGTCGCAGTAc > 2:774843/1‑230 (MQ=255) ggCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTggc > 1:168091/1‑169 (MQ=255) ggCCTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAGCGCATCAGCGCCGCCGGCATCCCGCTGTTCACCATCGAGGTTCCGTCGCAGTACGCGGt > 2:502476/1‑234 (MQ=255) ccTTCAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGCGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACCCCCTCGGCACGCTGAGCATCATCGAGCCCt > 2:181245/1‑165 (MQ=255) cAAGGTGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAGCGCATCAGCGCCGCCGGCATCCCGCTGTTCACCATCGAGGTGCCGTCGCAGt < 1:331577/221‑1 (MQ=255) | GTGACCAATGAGTGACAACGACTGCTCCGGCATGTCCCGGCGCTGCCTGCTCGGCGCGTCCTCGGCGATGCTCGCTCTCGGGCTTGCCGCACCATTGACCCGCGCCATGGCGGCTGGAGCCGACAGCGGTGCCGAGGCCAGTGCCACAGTACCTTCGCTGAAGGGCAAGCGCATCGCCATCAGCACCGTGGGCACCAGCATCTACTTCGACAGCCGGGCCTTCAAGGCGCAGGTCGAGGAAGTACAGCGCCTGGGCGGCACGCCGATCACCTTGGATGCCGGGCGCAACGACAAGGCCATGGTGACCCAGTTGCAGAATCTGGTGACGCTGAAGCCCGATGCAGTTATTCACACCCTCGGCACGCTGAGCATCATCGAGCCCTGGTTCAAGCGCATCAGCGCCGCCGGCATCCCGCTGTTCACCATCGAGGTGCCGTCGCAGTACGCGGT > AE015451/3142045‑3142494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |