| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 5,739,789 | A→C | 6.1% | E240A (GAA→GCA) | hutF → | probable formiminoglutamate deiminase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 5,739,789 | 0 | A | C | 6.1% | 227.1 / 7.2 | 66 | E240A (GAA→GCA) | hutF | probable formiminoglutamate deiminase |
| Reads supporting (aligned to +/- strand): ref base A (36/26); new base C (2/2); total (38/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.94e-02 | |||||||||||
GCTTTGGCGGCCAGGCGCCGAACGACGGGCAGCGGCGCTTCATCAACTCCACTGAACAGTACCTGCAACTGCAAGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGCGCGGTCGCCGGGTTGTGCCTGACCACCGAAGCCAACCTGGGCGATGGGATCTTCCCGGCAGTGGATTTCCTGGCACAGGGC > AE015451/5739558‑5740009 | gCTTTGGCGGCCAGGCGCCGAACGACGGGCAGCGGCGCTTCATCAACTCCACTGAACAGTACCTGCAACTGCAAGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAgaaggaa > 2:1062762/1‑233 (MQ=255) cggcCAGGCGCCGAACGACGGGCAGCGGCGCTTCATCAACTCCACTGAACAGTACCTGCAACTGCAAGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGCAGTCgtcgac > 1:530959/1‑235 (MQ=255) ggcCAGGCGCCGAACGACGGGCAGCGGCGCTTCATCAACTCCACTGAACAGTACCTGCAACTGCAAGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCgacgac > 2:937594/1‑234 (MQ=255) cGAACGACGGGCAGCGGCGCTTCATCAACTCCACTGAACAGTACCTGCAACTGCAAGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGCAGTCGTCGACTtccttctgct < 2:530958/235‑7 (MQ=255) gAACGACGGGCAGCGGCGCTTCATCAACTCCACTGAACAGTACCTGCAACTGCAAGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTgcctggcctg < 1:185460/234‑1 (MQ=255) gacgGGCAGCGGCGCTTCATCAACTCCACTGAACAGTACCTGCAACTGCAAGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCgg < 1:613418/236‑1 (MQ=255) tcTTCATCAACTCCACTGAACAGTACCTGCAACTGCAAGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGcctggcctgg < 1:232085/217‑1 (MQ=255) catcaACTCCACTGAACAGTACCTGCAACTGCAAGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGCGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTgcctg > 1:135200/1‑208 (MQ=255) cccggAACAGTACCTGCAACTGCAAGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGcctggcctgg < 1:897008/201‑1 (MQ=255) aaCAGTACCTGCAACTGCAAGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCac > 1:338506/1‑236 (MQ=255) tACCTGCAACTGCAAGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGc < 1:907219/229‑1 (MQ=255) aCCTGCAACTGCAAGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCacgtgg > 2:1119658/1‑234 (MQ=255) ctgcaactgcaaGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCGCTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGAGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTgcc > 1:258132/1‑202 (MQ=255) ctgcaactgcaaGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTcgacga > 1:541011/1‑179 (MQ=255) ctgcaactgcaaGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTgcctggcctg > 1:408968/1‑191 (MQ=255) ctgcaactgcaaGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCac > 1:989333/1‑228 (MQ=255) tgcaactgcaaGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCacgtggacgtg < 1:641112/236‑1 (MQ=255) actgcaaGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCacgtg > 2:911776/1‑226 (MQ=255) tgcaaGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAg < 2:526534/206‑1 (MQ=255) aaGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGCAGTCGTCGACTtcctt < 2:551311/176‑2 (MQ=255) aaGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGCAGTCGTCGACTtcctt > 1:551312/1‑175 (MQ=255) gcgcAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCacgtggacgtg < 1:542596/225‑1 (MQ=255) gcAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGt > 1:492237/1‑236 (MQ=255) aaCTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGc < 1:829831/182‑1 (MQ=255) tctTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTg < 1:495381/236‑1 (MQ=255) ctTCCCGCTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTgcctggcctg < 2:492702/171‑1 (MQ=255) tGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGc < 1:1119659/235‑1 (MQ=255) gCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTaca < 1:587032/227‑1 (MQ=255) ccGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTgg > 2:649275/1‑222 (MQ=255) gcgcAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCCGAAGGAAGCCGACGACCGCCTGGCCTGGAg > 2:163611/1‑158 (MQ=255) gcgcAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTacc > 2:396747/1‑223 (MQ=255) cagcaCCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTtcctgg > 2:493277/1‑139 (MQ=255) gCCTGGGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCt < 1:95295/196‑1 (MQ=255) ccTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCg > 1:872985/1‑220 (MQ=255) cTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCacgtg > 1:248744/1‑171 (MQ=255) gtgCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGGACACGCTACCCATGCCGAACCgta > 1:386278/1‑217 (MQ=255) gCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGcc > 1:716577/1‑236 (MQ=255) tCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAg < 1:433773/219‑1 (MQ=255) ccACTCTCGGCGGGCGGTGCGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACGGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTg < 2:263585/133‑1 (MQ=255) ctGCGGGCGGTGAGGCCGGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTg < 1:941865/173‑1 (MQ=255) tGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAgcggcgg < 1:502280/235‑2 (MQ=255) tGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGcgcg > 1:1092122/1‑236 (MQ=255) tGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGcgcg > 1:657828/1‑236 (MQ=255) cggTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTAccc < 1:359419/186‑1 (MQ=255) cggTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAgcggcggtccacgt < 1:9201/236‑9 (MQ=255) gTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGCGCGGTCGCCg < 1:219870/235‑1 (MQ=255) aGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGCGCGGTCGCCGGGtt > 1:14892/1‑236 (MQ=255) aGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGCGGCt > 2:345441/1‑131 (MQ=255) aGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGa > 2:407598/1‑184 (MQ=255) gATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGCGCGGTCGCCGGGTTGTGCCTggc > 1:812444/1‑232 (MQ=255) gCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAAc > 1:709993/1‑175 (MQ=255) gCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAg > 2:834096/1‑203 (MQ=255) gCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGCGCGGTCGCCGGGTTGTGCCTGaccac > 2:947020/1‑233 (MQ=255) gCCGAAGGGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCCCATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCt < 1:163890/152‑1 (MQ=255) ccGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCacgtgga > 2:89982/1‑130 (MQ=255) gcgggttgcgcggcCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGAACGAGCACGCGGACGAGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAgcggc > 1:244117/10‑204 (MQ=255) aGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTCCGAGCccgtgga > 2:137082/1‑126 (MQ=255) aGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGGGCATATCCAAATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTgc > 2:274746/1‑95 (MQ=255) gcggcCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGCGCGGTCGCCGGGTTGTGCCTGACCACCGAAGCCAACCTgg > 1:704831/1‑235 (MQ=255) ggcCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGCGCGGTc > 1:120305/1‑199 (MQ=255) gcCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGCGCGGTCGCCGGGTTGTGCCTGACCACCGAAGCCAACCTgg < 2:492236/232‑1 (MQ=255) cAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGCGCGGTCGCCGGGTTGTGCCTGACCACCGAAGCCAACCTGGGCGATGGGATCTTccc < 1:498408/236‑1 (MQ=255) caTCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGc < 2:166912/62‑1 (MQ=255) cGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCCGCGGCGCGGTCGCCGGGTTGTGcc > 2:362246/1‑176 (MQ=255) cGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGCGCGGTCGCCGGGTTGTGCCTGACCACCGAAGCCAACCTGGGCGATGGGATCTTCCCGGCAgg > 1:297414/1‑218 (MQ=255) cGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGCGCGGTCGCCGGGTTGTGCCTGACCACCGAAGCCAACCTGGGCGATGGGATCTTCCCGGCAGTGGATTTCCTGGCACAgggc < 1:1062763/235‑1 (MQ=255) agcagAAGGAAGTCGACGACTGCCTGGCATGGAGCGGCCTGCGCCCGATTCAGTGGCTGTAGGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCg > 2:799317/1‑119 (MQ=255) aaggaagTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGCGCGGTCGCCGGGTTGTGCCTGACCACCGAAGCCAACCTGGGCGATGGGATCTTCCCGGCAGTGGATTTCCTGGca > 1:250871/1‑219 (MQ=255) gaagTCGCCGGCGGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAg < 2:309522/118‑1 (MQ=255) | GCTTTGGCGGCCAGGCGCCGAACGACGGGCAGCGGCGCTTCATCAACTCCACTGAACAGTACCTGCAACTGCAAGCGCAACTCTTCCCGTTGCTGGCCGCGCAACCCGCGCAGCACCTGGGCCTGTGCTTCCACTCTCTGCGGGCGGTGAGGCCTGGGCAGATCGCCGAAGTGCTGGCGGCCAGCGACAGGCAGTGCCCGGTGCATATCCACATCGCCGAACAGCAGAAGGAAGTCGACGACTGCCTGGCCTGGAGCGGCCTGCGCCCGCTGCAGTGGCTGTACGAGCACGTGGACGTGGACCGCCGCTGGTGCCTGGTACACGCTACCCATGCCGAACCGGACGAAGTGACTGCCATGGCCCGCAGCGGCGCGGTCGCCGGGTTGTGCCTGACCACCGAAGCCAACCTGGGCGATGGGATCTTCCCGGCAGTGGATTTCCTGGCACAGGGC > AE015451/5739558‑5740009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |