New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 981334	101 (1.410)	8 (0.120)	7/330	NT	7.9%	coding (211/1863 nt)	hscA	DnaK‑like molecular chaperone specific for IscU
	?	AE015451	= 981392	91 (1.350)					coding (269/1863 nt)	hscA	DnaK‑like molecular chaperone specific for IscU

CCCGTGATGGCACCTAAGGTATTCAGATAAGCATGGCCCTACTGCAGATTGCCGAACCCGGTCAAAGCCCTCAGCCGCACCAGCGCCGCCTGGCGGTTGGAATCGACCTGGGTACCACCAACTCAATGGTCGCTGCACTGCGCAGCGGCCGTAGCGAGCCCCTGCCCGACGCGCAGGGTAACGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/981092‑981334 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccgcgcCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACGTTACCCTGCGCGTCGGGCAGGGGCTCGCTACGGCCGCTGCGCAGTGCAGCGACCATTGAGTTGGTGGTACCCAGGTCGATTCCAACCGCCAGGCGGCGCTGGTGCG  <  AE015451/981392‑981167                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCCGTGATGGCACCTAAGGTATTCAGATAAGCATGGCCCTACTGCAGATTGCCGAACCCGGTCAAAGCCCTCAGCCGCACCAGCGCCGCCTGGCGGTTGGAATCGACCTGGGTACCACCAACTCAATGGTCGCTGCACTGCGCAGCGGCCGTAGCGAGCCCCTGCCCGACGCGCAGGGTAACGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAG                                                                                                                                                                                                                                           <  1:209036/236‑1                                        TACTGCAGATTGCCGAACCCGGTCAAAGCCCTCAGCCGCACCAGCGCCGCCTGGCGGTTGGAATCGACCTGGGTACCACCAACTCAATGGTCGCTGCACTGCGCAGCGGCCGTAGCGAGCCCCTGCCCGACGCGCAGGGTAACGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGC                                                                                                                                                                                                                                    >  2:598765/1‑204                                                                                                                                                AGCGGCCGTAGCGAGCCCCTGCCCGACGAGCAGGGTAACGTCATTCTGCCGGCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAG                                                                                                                                                                                                                                           >  2:915350/1‑93                                                                                                                                                     CCGTAGCGAGCCCCTGCCCGACGCGCAGGGTAACGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCA                                                                                                                                                                                 >  1:1180318/1‑146                                                                                                                                                               CCCCGGCCCGACGCGCAGGGTAACGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGA                                                                                                                                                                                     <  2:1180313/132‑1                                                                                                                                                                                         CATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGGCGtcc                                                                                                                    >  1:930248/1‑168                                                                                                                                                                                                        GGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTC                                                                                                                                                                                           <  1:627821/85‑1                                                                                                                                                                                                        GGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTC                                                                                                                                                                                           >  2:627816/1‑85                                                                                                                                                                                                                              AACGAAGTGGGGCAGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACGTTACCCTGCGCGTCGGGCAGGGGCTCGCTACGGCCGCTGCGCAGTGCAGCGACCATTGAGTTGGTGGTACCCAGG                                 >  1:579972/1‑217                                                                                                                                                                                                                              AACGAAGTGGGGCAGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACG                                                                                                            >  2:862234/1‑142                                                                                                                                                                                                                                CGAAGTGGGGCAGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACGTTACCCTGCGCGTCGGGCAGGGGCTCGCTACGGCCGCTGCGCAGTGCAGCGACCATTGAGTTGGTGGTACCCAGGTC                               >  1:1089237/1‑217                                                                                                                                                                                                                                           AGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACGTTACCCTGCGCGTCGGGCAGGGGCTCGCTACGGCCGCTGCGCAGTGCAGCGACCATTGAGTTGGTGGTACCCAGGTCGATTCCAACCGCCAGGCGGCGCTGGTGCG  >  1:627796/1‑235                                                                                                                                                                                                                                                GCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACGTTACCCTGCGCGTCGGGCAGGGGCTCGCTACGGCCGCTGCGCAGTGCAGCGACCATTGAGTTGGTGGTACCCAGGTCG                              >  1:1135261/1‑202                                                                                                                                                                                                                                                GCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACGTTACCCTGCGCGTCGGGCAGGGGCTCGCTACGGCCGCTGCGCAGGGCAGCGACCATTG                                                  >  2:819030/1‑182                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCCGTGATGGCACCTAAGGTATTCAGATAAGCATGGCCCTACTGCAGATTGCCGAACCCGGTCAAAGCCCTCAGCCGCACCAGCGCCGCCTGGCGGTTGGAATCGACCTGGGTACCACCAACTCAATGGTCGCTGCACTGCGCAGCGGCCGTAGCGAGCCCCTGCCCGACGCGCAGGGTAACGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/981092‑981334 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccgcgcCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACGTTACCCTGCGCGTCGGGCAGGGGCTCGCTACGGCCGCTGCGCAGTGCAGCGACCATTGAGTTGGTGGTACCCAGGTCGATTCCAACCGCCAGGCGGCGCTGGTGCG  <  AE015451/981392‑981167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.