| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 2120561 = | 45 (0.630) | 3 (0.040) | 3/336 | NT | 6.6% | coding (1712/2355 nt) | PP_1885 | conserved protein of unknown function |
| ? | AE015451 | 2120579 = | 42 (0.610) | coding (1730/2355 nt) | PP_1885 | conserved protein of unknown function | |||||
TGATCGAGCACGTAGGCCACGTTGGCATCCACCTTACTGCCTGCGGTATAGGTGCAACGCCTGCCATCGCCCTCAGCGACGACCGAGCCCCGTCCTTCTTCGCCATCATCGACCACAGACCAGTCGAGGTCTCCGGTCTGCGCACCCGCCGTGAGGGTCAGTGTGTCGTCGAAGTAGCAGACCCGGATCAGTGGATTGACCGTCAATGTCGCGGGCGCCACAGAGGCCATGCTGATGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2120801‑2120561‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcctCTGTGGCGCCCGCGACATTGACGGTCAATCCACTGATCCGGGTCTGCTACTTCGACGACACACTGACCCTCACGGCGGGTGCGCAGACCGGAGACCTCGACTGGTCTGTGGTCGATGATGGCGAAGAAGGACGGGGCTCGGTCGTCGCTGAGGGCGATGGCAGGCGTTGCACCTATACCGCAGGCAGTAAGGTGGATGCCAACGTGGCCTACGTGCTCGATCA > AE015451/2120579‑2120801 TGATCGAGCACGTAGGCCACGTTGGCATCCACCTTACTGCCTGCGGTATAGGTGCAACGCCTGCCATCGCCCTCAGCGACGACCGAGCCCCGTCCTTCTTCGCCATCATCGACCACAGACCAGTCGAGGTCTCCGGTCTGCGCACCCGCCGTGAGGGTCAGTGTGTCGTCGAAGTAGCAGACCCGGATCAGTGGATTGACCGTCAATGTCGCGGGCGCCACAGAGGCCATGCTGAT > 1:530147/1‑236 TCGAGCACGTAGGCCACGTTGGCATCCACCTTACTGCCTGCGGTATAGGTGCAACGCCTGCCATCGCCCTCAGCGACGACCGAGCCCCGTCCTTCTTCGCCATCATCGACCACAGACCAGTCGAGGTCTCCGGTCTGCGCACCCGCCGTGAGGGTCAGTGTGTCGTCGAAGTAGCAGACCCGGATCAGTGGATTGACCGTCAATGTCGCGGGCGCCACAGAGGCCATGCTGATGGC > 1:803648/1‑236 CACGTAGGCCACGTTGGCATCCACCTTACTGCCTGCGGTATAGGTGCAACGCCTGCCATCGCCCTCAGCGACGACCGAGCCCCGTCCTTCTTCGCCATCATCGACCACAGACCAGTCGAGGTCTCCGGTCTGCGCACCCGCCGTGAGGGTCAGTGTGTCGTCGAAGTAGCAGACCCGGATCAGTGGATTGACCGTCAATGTCGCGGGCGCCACAGAGGCCATGCTGATGGCCT < 1:48058/233‑1 CGTAGGCCACGTTGGCATCCACCTTACTGCCTGCGGTATAGGTGCAACGCCTGCCATCGCCCTCAGCGACGACCGAGCCCCGTCCTTCTTCGCCATCATCGACCACAGACCAGTCGAGGTCTCCGGTCTGCGCACCCGCCGTGAGGGTCAGTGTGTCGTCGAAGTAGCAGACCCGGATCAGTGGATTGACCGTCAATGTCGCGGGCGCCACAGAGGCCATGCTGATGGC > 1:627001/1‑229 CGCCTGCCATCGCCCTCAGCGACGACCGAGCCCCGTCCTTCTTCGCCATCATCGACCACAGACCAGTCGAGGTCTCCGGTCTGCGCACCCGCCGTGAGGGTCAGTGTGTCGTCGAAGTAGCAGACCCGGATCAGTGGATTGACCGTCAATGTCGCGGGCGCCACAGAGGCCATGATGATGGC > 1:670645/1‑182 CCTCAGCGACGACCGAGCCCCGTCCTTCTTCGCCATCATCGACCACAGACCAGTCGAGGTCTCCGGTCTGCGCACCCGCCGTGAGGGTCAGTGTGTCGTCGAAGTAGCAGACCCGGATCAGTGGATTGACCGTCAATGTCGCGGGCGCCACAGAGGCCATGCTGATGGC < 2:518283/169‑1 GAGGTCTCCGGTCTGCGCACCCGCCGTGAGGGTCAGTGTGTCGTCGAAGTAGCAGACCCGGATCAGTGGATTGACCGTCAATGTCGCGGGCGCCACAGAGGCCATGCTGATGGCCTCTGTGGCGCCCGCGACATTGACGGTCAATCCACT > 2:680988/1‑150 CGCACCCGCCGTGAGGGTCAGTGTGTCGTCGAAGTAGCAGACCCGGATCAGTGGATTGACCGTCAATGTCGCGGGCGCCACAGAGGCCATGCTGATGGCCT < 2:328930/101‑1 AGTGTGTCGTCGAAGTAGCAGACCCGGATCAGTGGATTGACCGTCAATGTCGCGGGCGCCACAGAGGCCATGCTGATGGCCTCTGTGGCGCCCGCGACATTGACGGTCAATCCACTGA < 1:680993/118‑1 GTCAATGTCGCGGGCGCCACAGAGGCCATGCTGATGGCCTCTGTGGCGCCCGCGCCATTGACGGTCAATCCACTGATCCGGGTCTGCTACTTCGACGACACACTGACCCTCCAGGCG > 1:522312/1‑117 gCTCTGTGGCGCCCGCGACATTGACGGTCAATCCACTGATCCGGGTCTGCTACTTCGACGACACACTGACCCTCACGGCGGGTGCGCAGACCGGAGACCGCGACTGGTCTGTGGTCGATGATGGCGAAGAAGGACGGGGCTCGGTCGTCGCTGAGGGCGAT < 2:63636/160‑1 CCTCTGTGGCGCCCGCGACATTGACGGTCAATCCACTGATCCGGGTCTGCTACTTCGACGACACACTGACCCTCACGGCGGGg > 2:382732/1‑82 CCTCTGTGGCGCCCGCGACATTGACGGTCAATCCACTGATCCGGGTCTGCTACTTCGACGACACACTGACCCTCACGGCGGGTGCGCAGACCGGAGACCTCGACTGGTCTGTGGTCGATGATGGCGAAGAAGGACGGGGCTCGGTCGTCGCTGAGGGCGATGGCAGGCGTTGCACCTATACCGCAGGCAGTAAGGTGGATGCCAACGTGGCCTACGTG > 2:829696/1‑218 CTCTGTGTCGCCCGCGACATTGACGGTCAATCCACTGATCCGGGTCTGCTACTTCGACGACACACTGACCCTCACGGCGGGTGCGCAGACCGGAGACCTCGACTGGTCTGTGGTCGATGATGGCGAAGAAGGACGGGGCTCGGTCGTCGCTGAGGGCGATGGCAGGCGTTGCACCTATACCGCAGGCAGTAAGGTGGATGCCAACGTGGCCTACGTGCTCGATCA < 2:1069870/225‑1 TGATCGAGCACGTAGGCCACGTTGGCATCCACCTTACTGCCTGCGGTATAGGTGCAACGCCTGCCATCGCCCTCAGCGACGACCGAGCCCCGTCCTTCTTCGCCATCATCGACCACAGACCAGTCGAGGTCTCCGGTCTGCGCACCCGCCGTGAGGGTCAGTGTGTCGTCGAAGTAGCAGACCCGGATCAGTGGATTGACCGTCAATGTCGCGGGCGCCACAGAGGCCATGCTGATGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2120801‑2120561‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcctCTGTGGCGCCCGCGACATTGACGGTCAATCCACTGATCCGGGTCTGCTACTTCGACGACACACTGACCCTCACGGCGGGTGCGCAGACCGGAGACCTCGACTGGTCTGTGGTCGATGATGGCGAAGAAGGACGGGGCTCGGTCGTCGCTGAGGGCGATGGCAGGCGTTGCACCTATACCGCAGGCAGTAAGGTGGATGCCAACGTGGCCTACGTGCTCGATCA > AE015451/2120579‑2120801 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |