New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 4192478 | 104 (1.460) | 5 (0.080) | 5/310 | NT | 5.3% | intergenic (+84/‑565) | PP_5613/PP_5614 | protein of unknown function/protein of unknown function |
? | AE015451 | = 4192458 | 88 (1.390) | intergenic (+64/‑585) | PP_5613/PP_5614 | protein of unknown function/protein of unknown function |
CGGACGCTCTGATTGCCCGTTACGTCTTTCTGCTTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4192232‑4192478 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcatccatggatgcggcCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCTAGGTCGGGAAACTCGTACTGATCCAAGCCCAAGCGACCAGCTTGGATGACCGTTAAAGCAGAAAGACGTAACGGGCAATCAGAGCGTCCGGAGCAAA < AE015451/4192458‑4192225 CGGACGCTCTGATTGCCCGTTACGTCTTTCTGCTTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATC > 1:625153/1‑235 CTGATTGCCCGTTACGTCTTTCTGCTTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGC < 1:467582/236‑1 TAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGG > 2:664655/1‑157 ACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCG > 1:686269/1‑183 taagagacagCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCTAGGTCGGGAAACTCG < 1:234133/226‑1 GCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGCCAGGCCGCATCCATGGATGCGTCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTAC > 2:109982/1‑98 TCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCT > 2:234130/1‑197 TCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCG < 2:660559/58‑1 AAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATTGATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCTAGGTCGGGAAACTCGTACTGATCCAAGCCCAAGCGACCAGC > 1:930313/1‑236 CGCATCCATGGATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGA < 1:660564/58‑1 CATCCATGGATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCTAGGTCGGGAAACTCGTACTGATCCAAGCCCAAGCGACCAGCTTGGATGACCGTTAAAGCAGAAAGACGTAACGGGCAATCAGA > 1:591464/1‑236 GATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCTAGGTCGGGAAACTCGTACTGATCCAAGCCCAAGCGACCAGCTTGGATGACCGTTAAAGCAGAAAGACGTAACGGGCAATCAGAGCGTCCG < 1:1044896/235‑1 GATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCTAGGTCGGGAAACTCGTACTGATCCAAGCCCAAGCGACCAGCTTGGATGACCGTTAAAGCAGAAAGACGTAACGGGCAATCAGAGCGTCCG < 1:1247526/235‑1 GCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCTAGGTCGGGAAACTCGTACTGATCCAAGCCCAAGCGACCAGCTTGGATGACCGTTAAAGCAGAAAGACGTAACGGGCAATCAGAGCGTCCGGAGCAAA > 1:231118/1‑236 CGGACGCTCTGATTGCCCGTTACGTCTTTCTGCTTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4192232‑4192478 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcatccatggatgcggcCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCTAGGTCGGGAAACTCGTACTGATCCAAGCCCAAGCGACCAGCTTGGATGACCGTTAAAGCAGAAAGACGTAACGGGCAATCAGAGCGTCCGGAGCAAA < AE015451/4192458‑4192225 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |