New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4711816	62 (0.870)	4 (0.060)	4/334	NT	6.1%	coding (48/2115 nt)	PP_4171	conserved exported protein of unknown function
	?	AE015451	= 4711822	63 (0.920)					coding (54/2115 nt)	PP_4171	conserved exported protein of unknown function

GTTTGCGGTACTTGCCATGGCATTTTCGGAGCCGTCGAGATCGAGCACCGCCACGCGGTACTTTTCAAGACGTACGCCCGACACCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4711621‑4711816 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccgccGAGCAGGGCGGTCAATAACAGCAGGCGCGGGTACGGGGGCGTGCCAGGGAACACGGAGCGGCCTTTGTTTCAGGATTGAAACAGGCATGGTAACTGACCGTGGGGGTTTTGCCAGTGGGTGTCGGGCGTACGTCTTGAAAAGTACCGCGTGGCGGTGCTCGATCTCGACGGCTCCGAAAATG  <  AE015451/4711822‑4711641                                                                                                                                                                                                                                                                                                                                                                                            GTTTGCGGTACTTGCCATGGCATTTTCGGAGCCGTCGAGATCGAGCACCGCCACGCGGTACTTTTCAAGACGTACGCCCGACACCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGGTATTGACC                                                                                                                                                                                           >  1:634358/1‑193                 ATGGCATTTTCGGAGCCGTCGAGATCGAGCACCGCCACGCGGTACTTTTCAAGACGTACGCCCGACACCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTG                                                                                                                                                                                              >  2:823035/1‑174                                                                             CCCGACACCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGC                                                                                                                                                                                         >  2:203528/1‑119                                                                                                                    TGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTTACCGCCGAGCAGGGCGGTCAATAACAGCAGGCGCGGGTACGGGGGCGTGCCAGGGAACACGGAGCGGCCTTTGGTTCAGGATTGAAACAGGCATGGc                                                                                             >  1:27953/1‑171                                                                                                                                                    CGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCGAGCAGGGCGGGCAATAACAGCAGGCGCGGGTACGGGGGCGTGCCAGGGAACACGGAGCGGCCTTTGTTTCAGGATTGAAACAGGCATGGTAGCTGACCGTGGGG                                                                               >  1:213287/1‑154                                                                                                                                                                        CGTACCCGCGCCTGCTGTTATTGACCGCCGAGCAGGGCGGTCAATAACAGCAGGCGCGGGTACGGGGGCGTGCCAGGGAACACGCAGCGGCCTTTt                                                                                                                     >  2:42069/1‑95                                                                                                                                                                                  CCTGCTGTTATTGACCGCCGAGCAGGGCGGTCAATAACAGCAGGCGCGGGTACGGGGGCGTGCCAGGGAACACGGAGCGGCCTTTGTTTCAGGATTGAAACAGGCATGGTAACTGACCGTGGGGGTTTTGCCAGTGGGTGTCGGGCGTACGTCTTGAAAAGTACCGCGTGGCGGTGCTCGATCTCGACGGCTCCGAAAATG  >  1:1087562/1‑201                                                                                                                                                                                                                                                                                                                                                                                            GTTTGCGGTACTTGCCATGGCATTTTCGGAGCCGTCGAGATCGAGCACCGCCACGCGGTACTTTTCAAGACGTACGCCCGACACCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4711621‑4711816 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccgccGAGCAGGGCGGTCAATAACAGCAGGCGCGGGTACGGGGGCGTGCCAGGGAACACGGAGCGGCCTTTGTTTCAGGATTGAAACAGGCATGGTAACTGACCGTGGGGGTTTTGCCAGTGGGTGTCGGGCGTACGTCTTGAAAAGTACCGCGTGGCGGTGCTCGATCTCGACGGCTCCGAAAATG  <  AE015451/4711822‑4711641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.