| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 5365051 = | 88 (1.230) | 6 (0.090) | 6/334 | NT | 7.2% | coding (1505/1914 nt) | ftsH | integral membrane ATP‑dependent zinc metallopeptidase |
| ? | AE015451 | 5365082 = | 71 (1.040) | coding (1474/1914 nt) | ftsH | integral membrane ATP‑dependent zinc metallopeptidase | |||||
TGGCCACGCCATTGTCGGTCGCCTGGTGCCTGAGCACGACCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTGGGTGTGACCATGTTCCTGCCGGAAGAAGACCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATGACCTTGGGCTTCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGCGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5365293‑5365051‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgccagTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTT > AE015451/5365082‑5365313 TGGCCACGCCATTGTCGGTCGCCTGGTGCCTGAGCACGACCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTGGGTGTGACCATGTTCCTGCCGGAAGAAGACCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATGACCTTGGGCTTCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGC > 1:1274138/1‑236TGGCCACGCCATTGTCGGTCGCCTGGTGCCTGAGCACGACCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTGGGTGTGACCATGTTCCTGCCGGAAGAAGACCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATGACCTTGGGCTTCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGC > 1:835287/1‑236 GGTGCCTGAGCACGACCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTGGGTGTGACCATGTTCCTGCCGGAAGAAGACCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATGACCTTGGGCTTCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGCGCGCCAGTGGTCACGCC > 1:1010219/1‑229 GGTGCCTGAGCACGACCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTGGGTGTGACCATGTTCCTGCCGGAAGAAGACCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATGACCTTGGGCTTCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGCGCGCCAGTGGTCACGCC < 2:1010214/229‑1 CCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTGGGTGTGACCATGTTCCTGCCGGAAGAAGACCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGAGGACCTTGGGCTTCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGC > 1:32730/1‑197 tgcCCATGTTCCTGCCGGAAGAAGCCCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATGACCTTGGGCTTCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGCGCG < 2:279665/150‑1 CGTGCGCTGATCAGCCAGATCAGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATGACCTTGGGCTTCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGCGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCG < 1:686870/170‑1 CAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATGACCTTGGGCTTCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGCGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATC < 1:549730/172‑1 ATGACCTTGGGCTTCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGCGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGAT > 1:1079149/1‑210 TCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGCGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACC < 2:1079144/234‑1 GCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGT < 2:843232/214‑1 GCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGC > 1:334333/1‑210 GCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCA > 1:644200/1‑187 AGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCA < 1:43080/214‑1 AGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGGCACAACCAAGGCACGACCACGCGGGATGATC > 1:113926/1‑157 GTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCGTCGTGATAGGCAGTGTT > 2:679236/1‑233 TGGCCACGCCATTGTCGGTCGCCTGGTGCCTGAGCACGACCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTGGGTGTGACCATGTTCCTGCCGGAAGAAGACCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATGACCTTGGGCTTCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGCGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5365293‑5365051‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgccagTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTT > AE015451/5365082‑5365313 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |