New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5916382 =	61 (0.850)	3 (0.040)	3/334	NT	4.3%	coding (445/1143 nt)	argE	acetylornithine deacetylase
	?	AE015451	5917106 =	75 (1.100)					coding (164/1368 nt)	ygiF	putative thiamine triphosphatase
Rejected: Frequency below/above cutoff threshold.

CGGGAGGGCTGGTGCTGGCCGGGCACAGCGATACCGTGCCCTATGACGAACAGCTGTGGGCCAGCGACCCGCTGAAGCTGATCGAGACCGATGGCCGTTGGGTCGGCCTGGGCAGCTGCGACATGAAGGGCTTCTTCGCCCTGGTCATCGAAGCGGTCATCCCGCTGCTGGAGCACGACTTCAAGGAGCCGCTGCTGATCCTTGCCACCTGCGACGAAGAAAGCTCCATGTCCGGCGCCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/5916624‑5916382 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgtgTCGCCCTGCGCCTGCGCCGCGATGGCGACGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGCGTGGCCGGCCTGTCCGAACGCAACGAGTACGAATGGAACCTGGACAAGGTCAAGCTCGACCTGAAGAAGCTGGACGCCACCTGCTGGCCCGAGCAACTGGCCAACCTGGACAAGAAAACCATCAAGCCGCTGTTCACCACCGACTTCAGCCGTGAATACGCTG  >  AE015451/5917106‑5917333                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGGGAGGGCTGGTGCTGGCCGGGCACAGCGATACCGTGCCCTATGACGAACAGCTGTGGGCCAGCGACCCGCTGAAGCTGATCGAGACCGATGGCCGTTGGGTCGGCCTGGGCAGCTGCGACATGAAGGGCTTCTTCGCCCTGGTCATCGAAGCGGTCATCCCGCTGCTGGAGCACGACTTCAAGGAGCCGCTGCTGGTCCTTGCCACCTGCGACGAAGAAAGCTCCATGTCCGGC                                                                                                                                                                                                                                             <  1:631810/236‑1       GGCTGGTGCTGGCCGGGCACAGCGATACCGTGCCCTATGACGAACAGCTGTGGGCCAGCGACCCGCTGAAGCTGATCGAGACCGATGGCCGTTGGGTCGGCCTGGGCAGCTGCGACATGAAGGGCTTCTTCGCCCTGGTCATCGAAGCGGTCATCCCGCTGCTGGAGCACGACTTCAAGGAGCCGCTGCTGATCCTTGCCACCTGCGACGAAGAAAGCTCCATGTCCGGCGCCCG                                                                                                                                                                                                                                        <  1:803311/235‑1              GCTGGCCGGGCACAGCGAGCCCGTGCCCTAGGACGAACTGCTGTGGGCCAGCGACCCGCTGAAGCTGATCGAGACCGATGGCCGTTGGGTCGGCCTGGGCAGCTGCGACATGAAGGGCTTCTTCGCCCTGGTCATCGAAGCGGTCATCCCGCTGCTGGAGCACGACTTCAAGGAGCCGCTGCTGATCCTTGCCACCTGCGACGAAGAAAGCTCCATGTCCGGC                                                                                                                                                                                                                                             <  1:324743/223‑1                                        CCTATGACGAACAGCTGTGGGCCAGCGACCCGCTGAAGCTGATCGAGACCGATGGCCGTTGGGTCGGCCTGGGCAGCTGCGACATGAAGGGCTTCTTCGCCCTGGTCATCGAAGCGGTCATCCCGCTGCTGGAGCACGACTTCAAGGAGCCGCTGCTGATCCTTGCCACCTGCGACGAAGAAAGCTCCATGTCCGGCGCCCG                                                                                                                                                                                                                                        >  1:590254/1‑202                                                                                                                                         CGCCCTGGTCATCGAAGCGGTCATCCCGCTGCTGGAGCACGACTTCAAGGAGCCGCTGCTGATCCTTGCCACCTGCGACGAAGAAAGCTCCATGTCCGGCGCCCGTGTCGCCCTGCGCCTGCGCCGCGATGGCGACGCTGTCATTCAAACCCTCAAGTG                                                                                                                                                                                  <  1:960895/159‑1                                                                                                                                         CGCCCTGGTCATCGAAGCGGTCATCCCGCTGCTGGAGCACGACTTCAAGGAGCCGCTGCTGATCCTTGCCACCTGCGACGAAGAAAGCTCCATGTCCGGCGCCCGTGTCGCCCTGCGCCTGCGCCGCGATGGCGACGCTGTCATTCAAACCCTCAAGTG                                                                                                                                                                                  >  2:960890/1‑159                                                                                                                                                                  CCGCTGCTGGAGCACGACTTCAAGGAGCCGCTGCTGATCCTTGCCACCTGCGACGAAGAAAGCTCCATGTCCGGCGCCCGTGTCGCCCTGCGCCTGCGCCGCGATGGCGACGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGCGTGGCCGGCCTGTCCGAACGCAACGAGTACGAATGGAACCTGGACAAGGTCAAGCTCGACCTGAAGAAGCTGGACGCCACCTGCTGcc                                                                             >  1:315275/1‑233                                                                                                                                                                                                                                            CGCCCGTGTCGCCCTGCGCCTGCGCCGCGATGGCGACGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGCGTGGCCGGCCTGTCCGAACGCAACGAGTACGAATGGAACCTGGACAAGGTCAAGCTCGACCTGAAGAAGCTGGACGCCACCTGCTGGCCCGAGCAACTGGCCAACCTGGACAAGAAAACCATCAAGCCGCTGTTCACCACCGACTTCAGCCGTGAATACGCTG  <  1:582145/236‑1                                                                                                                                                                                                                                            CGCCCGTGTCGCCCTGCGCCTGCGCCGCGATGGCGACGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGCGTGGCCGGCCTGTCCGAACGCAACGAGTACGAATGGAACCTGGACAAGGTCAAGCTCGACCTGAAGAAGCTGGACGCCACCTGCTGGCCCGAGCAACTGGCCAACCTGGACAAGAAAACCATCAAGCCGCTGTTCACCACCGACTTCAGCCGTGAATACGCTG  <  1:772778/236‑1                                                                                                                                                                                                                                                CGTGTCGCCCTGCGCCTGCGCCGCGATGGCGACGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGCGTGGCCGGCCTGTCCGAACGCAACGAGTACGAATGGAACCTGGACAAGGTCAAGCTCGACCTGAAGAAGCTGGACGCCACCTGCTGGCCCGAGCAACTGGCCAACCTGGACAAGAAAACCATCAAG                                       <  2:287072/195‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGGGAGGGCTGGTGCTGGCCGGGCACAGCGATACCGTGCCCTATGACGAACAGCTGTGGGCCAGCGACCCGCTGAAGCTGATCGAGACCGATGGCCGTTGGGTCGGCCTGGGCAGCTGCGACATGAAGGGCTTCTTCGCCCTGGTCATCGAAGCGGTCATCCCGCTGCTGGAGCACGACTTCAAGGAGCCGCTGCTGATCCTTGCCACCTGCGACGAAGAAAGCTCCATGTCCGGCGCCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/5916624‑5916382 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgtgTCGCCCTGCGCCTGCGCCGCGATGGCGACGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGCGTGGCCGGCCTGTCCGAACGCAACGAGTACGAATGGAACCTGGACAAGGTCAAGCTCGACCTGAAGAAGCTGGACGCCACCTGCTGGCCCGAGCAACTGGCCAACCTGGACAAGAAAACCATCAAGCCGCTGTTCACCACCGACTTCAGCCGTGAATACGCTG  >  AE015451/5917106‑5917333

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.