New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	6071413 =	91 (1.270)	5 (0.070)	4/330	NT	5.6%	coding (165/771 nt)	phoU	phosphate transport‑associated protein
	?	AE015451	6071506 =	82 (1.220)					coding (72/771 nt)	phoU	phosphate transport‑associated protein

CCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGCCGCGCTACCAAAGGACAAAACGATGATCAACAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/6071657‑6071413 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcaggtgGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGAACA  >  AE015451/6071506‑6071737                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGCCGCGCTACCAAAGGACAAAACGATGATCAACAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGTTCTGGCC                                                                                                                                                                                                                                                   >  1:583417/1‑236    TGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGCCGCGCTACCAAAGGACAAAACGATGATCAACAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAG                                                                                                                                                                                                                                                <  1:682909/236‑1      GTGTCTGGCACCGGGGTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGCCGCGCTACCAAAGGACAAAACGATGATCAACAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCA                                                                                                                                                                                                                                                 >  2:610491/1‑233                           GGTGTTCGCGGGTGAACCCGCTCCTACAGGGCCGCGCTACCAAAGGACAAAACGATGATCAACAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAG                                                                                                                                                                                                                                             >  1:1030634/1‑216                                 CGCGGGTGAACCCGCTCCTACAGGGCCACGCTACCAAAGGACAAAACGATGATCAACAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCA                                                                                                                                                                                                                                              <  2:509803/209‑1                                                             CGCTACCAAAGGACAAAACGATGATCAACAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCC                                                                                                                                                                                                                                                   >  2:338763/1‑176                                                                                                    TTACCCCTCACATTTCCCAGCAGTTCAACTCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAG                                                                                                                                                <  1:1101309/236‑1                                                                                                                     ccGCAGTTCAACGCCGAGCTAGAAGAGGTGCGCAGCCACCTGCTGGCCGTGGGCGGGCTGGTGGAAAAGCAGGTAAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGC                                                                                                                                                                                  <  1:80473/183‑1                                                                                                                                CGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCGGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGG                                                                                                                                                                                                     <  2:33937/155‑1                                                                                                                                                 TGCGTAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAACAGCAGGTCAACCCCGCGGTTACCGCGCTGATCGAAGCCGAGTCTGGTCGGGCCCA                                                                                                                                                                                                                                                 <  2:799004/94‑1                                                                                                                                                                                                 ACGACGCGGTGACCGGGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGG                                                                                                                                                                                                     <  2:60208/90‑1                                                                                                                                                                                                    ACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCG                                                                                                                                                                                                                 <  2:100143/75‑1                                                                                                                                                                                                                                             CAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGT       <  1:422181/236‑1                                                                                                                                                                                                                                             CAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTAGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGT       <  1:722435/236‑1                                                                                                                                                                                                                                                CAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGA     <  1:422263/235‑1                                                                                                                                                                                                                                                CAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTCGGTAGCGCGGCCCTGTAGGAGCGGGTTCACTCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGA     <  1:689748/235‑1                                                                                                                                                                                                                                                  GGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGAACA  >  2:240074/1‑236                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGCCGCGCTACCAAAGGACAAAACGATGATCAACAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/6071657‑6071413 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcaggtgGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGAACA  >  AE015451/6071506‑6071737

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.