New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 6138053	80 (1.120)	6 (0.090)	6/338	NT	7.0%	coding (508/1254 nt)	czcC	metal RND efflux outer membrane protein, CzcC family
	?	AE015451	= 6138068	81 (1.180)					coding (523/1254 nt)	czcC	metal RND efflux outer membrane protein, CzcC family

GAGACTTCATGACCATGCAGGTGGTCGGTCTTTCTCAGGAGGTGCCCAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCACTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/6137814‑6138053 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcggCCAGGCGCGCACGCACCGCCGCTGCCAGCAAACGGTTTTCGTTGAACAGCATGTCGAACTGCTGCAGTTTGCGTTGCAGGGTGTACGCAGTAATCCAGGCTTGTGCCGTGGCGGCGCGCACTTTCAAGCGCTCAAACAGTGCTTCGGCATCCGCACGTTCAACCGTGGCCTGTGCAGTTTCGACCCGCGCTTTGCGTTTGTCGCGATTGGGCACCTCC  <  AE015451/6138068‑6137851                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAGACTTCATGACCATGCAGGTGGTCGGTCTTTCTCAGGAGGTGCCCAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCACTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGC                                                                                                                                                                                                                                 >  1:595514/1‑235                                                                                                 AACGTGCGGATGCCGAAGCACTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGC                                                                                                                                                                                                                              <  2:293931/142‑1                                                                                                                                                                                      ACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGCCAGGCGCGCACGCACCGCCGCTGCCAGCAAACGGTTTTCGTTGAACAGCATGTCGAACTGCTGCAGTTTGCGTTGCAGGGTGTACGCAGTAATCCAGGCTTGTGCCGTGGCGGCGCGCACTTTCAAGCGCTCAAACAGTGCTTCGGCATCCGCAC                                                                <  1:782157/215‑1                                                                                                                                                                                      ACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGCCAGGCGCGCACGCACCGCCGCTGCCAGCAAACGGTTTTCGTTGAACAGCATGTCGAACTGCTGCAGTTTGCGTTGCAGGGTGTACGCAGTAATCCAGGCTTGTGCCGTGGCGGCGCGCACTTTCAAGCGCTCAAACAGTGCTTCGGCATCCGCAC                                                                >  2:782152/1‑215                                                                                                                                                                                             CTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGCCAGGCGCGCACGCACCGCCGCTGCCAGCAAACGGTTTTCGTTGAACAGCATGTCGAACTGCTGCAGTTTGCGTTGCAGGGTGTACGCAGTAATCCAGGCTTGTGCCGTGGCGGCGCGCACTCTCAAGCGCTCAAACAGTGCTTCGGCATCCG                                                                   >  2:785494/1‑205                                                                                                                                                                                               GCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGCCAGGCGCGCACGCACCGCCGCTGCCAGCAAACCGTTTTCGTTGAACAGCATGTCGAACTGCTGCAGTTTGCGTTGCAGGGGGTACGCAGc                                                                                                                                 >  1:146422/1‑140                                                                                                                                                                                                                               GTTTGCTGGCAGCGGCGGCCAGGCGCGCACGCACCGCCGCTGCCAGCAAACGGTTTTCGTTGAACAGCATGTCGAACTGCTGCAGTTTGCGTTGCAGGGTGTACG                                                                                                                                     >  1:130000/1‑105                                                                                                                                                                                                                                  TGCTGGCAGCGGCGGCCAGGCGCGCACGCACCGCCGCTGCCAGCAAACGGTTTTCGTTGAACAGCATGTCGAACTGCTGCAGTTTGCGTTGCAGGGTGTACGCAGTAATCCAGGCTTGTGCCGTGGCGGCGCGCACTTTCAAGCGCTCAAACAGTGCTTCGGCATCCGCACGTTCAACCGTGGCCTGTGCAGTTTCGACCCGCGCTTTGCGTTTGTCGCGATTGGGCACCTCC  >  2:1237099/1‑233                                                                                                                                                                                                                                             GCGGCCGGGCGCGCACGCACCGCCGCTGCCAGCAAACGGTTTTCGTTGAACAGCATGTCGAACTGCTGCAGTTTGCGT                                                                                                                                                  <  2:129997/78‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAGACTTCATGACCATGCAGGTGGTCGGTCTTTCTCAGGAGGTGCCCAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCACTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/6137814‑6138053 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcggCCAGGCGCGCACGCACCGCCGCTGCCAGCAAACGGTTTTCGTTGAACAGCATGTCGAACTGCTGCAGTTTGCGTTGCAGGGTGTACGCAGTAATCCAGGCTTGTGCCGTGGCGGCGCGCACTTTCAAGCGCTCAAACAGTGCTTCGGCATCCGCACGTTCAACCGTGGCCTGTGCAGTTTCGACCCGCGCTTTGCGTTTGTCGCGATTGGGCACCTCC  <  AE015451/6138068‑6137851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.