New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4022305	32 (0.450)	5 (0.070)	5/330	NT	10.4%	coding (1/942 nt)	PP_3547	putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain
	?	AE015451	4022806 =	56 (0.830)					intergenic (‑501/+167)	PP_3547/emrB	putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/multidrug efflux transport system ‑ permease subunit

ACCGCGGCTGCCGCCGGTGATGACAATGACGTTCTCCATGGGTTTGCCAATGGTTTGGGGAAGGGAACATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGT  >  AE015451/4022072‑4022538                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                          aCCGCGGCTGCCGCCGGTGATGACAATGACGTTCTCCATGGGTTTGCCAATGGTTTGGGGAAGGGAACATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTTCGGAGGCAGGTGACGGGCAT                                                                                                                                                                                                                                           >  2:994244‑M1/1‑234 (MQ=255)   cgcgGCTGCCGCCGGTGATGACAATGACGTTCTCCATGGGTTTGCCAATGGTTTGGGGAAGGGAACATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGA                                                                                                                                                                                                                                        <  1:515571‑M1/235‑1 (MQ=255)           ccgccgGTGATGACAATGACGTTCTCCATGGGTTTGCCAATGGTTTGGGGAAGGGAACATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCAT                                                                                                                                                                                                                                           <  2:932581‑M1/224‑1 (MQ=255)                ggTGATGACAAGGACGTTCTCCATGGGTTTGCCAATGGTTTGGGGAAGGGAACATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAgcgc                                                                                                                                                                                                                          <  1:361293/236‑1 (MQ=255)                                                cAATGGTTTGGGGAAGGGAACATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATgg                                                                                                                                                                                                                                         >  1:497924/1‑189 (MQ=255)                                                cAATGGTTTGGGGAAGGGAACATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGcgcg                                                                                                                                                                                             >  2:1142865/1‑233 (MQ=255)                                                cAATGGTTTGGGGAAGGGAACATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGAT                                                                                                                                                                                                                                       >  2:809090‑M1/1‑191 (MQ=255)                                                  aTGGTTTGGGGAAGGGAACATCGACAATAGGCGAAAGCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAgg                                                                                                                                                                                                                     <  1:287898/207‑1 (MQ=255)                                                      tttGGGGAAGGGAACATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCt                                                                                                                                                                                        <  2:1020351/232‑1 (MQ=255)                                                      tttGGGGAAGGGAACATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCt                                                                                                                                                                                        >  1:1020356/1‑232 (MQ=255)                                                       ttGGGGAAGGGAACATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAcctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatc                                                                                                                                                                                   <  1:656063‑M1/236‑45 (MQ=255)                                                        tGGGGAAGGGAACATCGTCAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGACTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCgg                                                                                                                                                                                   <  1:686338/235‑1 (MQ=255)                                                               gagaacaTCGACAATAGGCGAAATCGGGCTGCCTTTGAATGACGAACATCAGCACAGCCTACCCTCTACTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGA                                                                                                                                                                                                                                        <  2:1117873‑M1/173‑1 (MQ=255)                                                                ggaaCATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGc                                                                                                                                                                          <  1:987998/236‑1 (MQ=255)                                                                  aaCATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATccatgcccgtcacctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcgg                                                                                                                                                                              >  1:427313‑M1/1‑169 (MQ=255)                                                                  aaCATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGcc                                                                                                                                                                                     >  1:833579/1‑223 (MQ=255)                                                                  aaCATCGACAATAGGCGAAATCGCGCTGCGTTGAAATGACGAAGATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCATTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAgg                                                                                                                                                                           >  2:795828/1‑233 (MQ=255)                                                                     aTCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGcc                                                                                                                                                                                                                   <  1:1107318/190‑1 (MQ=255)                                                                       cGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGt                                                                                                                                                                    >  1:512485/1‑235 (MQ=255)                                                                        gACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCA                                                                                                                                                                                                                               >  1:638303‑M1/1‑175 (MQ=255)                                                                          cAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAgg                                                                                                                                                                >  1:859659/1‑236 (MQ=255)                                                                           aaTAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCg                                                                                                                                                                        <  2:1195806/227‑1 (MQ=255)                                                                               ggCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGATTGAGGGa                                                                                                                                                              >  2:487845/1‑233 (MQ=255)                                                                                 cGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAgc                                                                                                                                                                                                                            <  2:704581/169‑1 (MQ=255)                                                                                            tGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGagcgcagc                                                                                                                                               <  1:795833/235‑1 (MQ=255)                                                                                              cGTTGGAATGACGACCAGCAGCACAGCCAACCCTCTGCTTTTGAGCTGGCTTTTGATCTGGCGTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGGCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCgg                                                                                                                                                                                   <  2:381579/197‑1 (MQ=255)                                                                                                   gAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGACAAGCGCTGAGGCCCCAGGAt                                                                                                                                                                                                            >  1:396992/1‑167 (MQ=255)                                                                                                           aaCATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAcctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagaagcaaaatcaaaagccgaagcg                                                                                                                                >  1:472391‑M1/1‑140 (MQ=255)                                                                                                            aCATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGc                                                                                                                                                                                                       <  2:290403/163‑1 (MQ=255)                                                                                                              aTCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCACCAGGATGGGGCCGTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCg                                                                                                                                                        <  1:984646/208‑1 (MQ=255)                                                                                                                cAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATg                                                                                                                                                                                                                                          >  2:869516/1‑124 (MQ=255)                                                                                                                      aGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAcctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcg                                                                                                                                                            >  1:522936‑M1/1‑129 (MQ=255)                                                                                                                         cAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAgc                                                                                                                         <  2:1241598/228‑1 (MQ=255)                                                                                                                           aCCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCg                                                                                                                   >  1:506880/1‑232 (MQ=255)                                                                                                                                     tttgatctggcttttgatctggctTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATccatgcccgtcacctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcgg                                                                                                                                                                              <  2:485583‑M1/163‑62 (MQ=255)                                                                                                                                          tctggcttttgatctggcttttgaTCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAcctcccttcgcaagccctgcgctcggcctcct                                                                                                                                                                                               >  2:86974‑M1/1‑109 (MQ=255)                                                                                                                                                 tttgatctggcttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCg                                                                                                                                                                        <  1:496452/157‑1 (MQ=38)                                                                                                                                                    gatctggcttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCaa                                                                                                                                                                             <  2:968323/149‑1 (MQ=37)                                                                                                                                                     atctggcttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGAAGGGAGCGCAGCGTTTTTGGGTTACTTTTTGTCGCGttt                                                                                         >  1:17696/1‑232 (MQ=25)                                                                                                                                                           cttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATccatgcccgtcacctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccccggcgcc                                                                                                                                                                          >  1:169993‑M1/1‑80 (MQ=255)                                                                                                                                                           cttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGT                                                                                                >  1:514528‑M1/1‑219 (MQ=255)                                                                                                                                                                         cttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGtt                                                                                                                 <  1:282932/188‑1 (MQ=31)                                                                                                                                                                               cttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGatgcccgtcacctccctccgcaagccctacgctcggcctcctgaagtcgcaatctgcgtcgcctgaactatcgcgcacttagaagcaaaagccacggcaacggcaacggcaacgaacc                                                                                                                   <  1:99138‑M2/180‑119 (MQ=255)                                                                                                                                                                                  gatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCgg                                                                                                                                                       <  2:478287/141‑1 (MQ=32)                                                                                                                                                                                  gatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAggg                                                                <  2:885475/228‑1 (MQ=31)                                                                                                                                                                                           gccttCAGGAGGCCGAACGCGGGCCTTGCGGCGGGAGGTGACGGGCATGGATGCCCGTCAcctcccttcgcaagccctgcgctcggcttcctgaagtcgcaatccgcgg                                                                                                                                                                              <  1:130743‑M1/107‑50 (MQ=255)                                                                                                                                                                                           gACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATccatgcccgtcaccccccttcgcaagccctgcgctcggcctcctga                                                                                                                                                                                             >  1:367127‑M1/1‑48 (MQ=255)                                                                                                                                                                                           gACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGatgcccgtcacctccctccgcaagccctacgctcggcctcctgaagtcgcaatctgcgtcgcctgaactatcgcgcacttagaagcaaaagccacggcaacggccacggccacgaaccgagtctggtc                                                                                                         <  1:9036‑M2/178‑129 (MQ=255)                                                                                                                                                                                           gACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAcctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagaagcaaaatcaaaagccgaa                                                                                                                                   >  1:842600‑M1/1‑60 (MQ=255)                                                                                                                                                                                            aCTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGatgcccctcacctccctccgcaagccctacgctcggcctcctgaagtcgcaatctgcgtcgcctgaactatcgcgcacttagaagcaaaagcgacggcaacggcaacggcaacgaaccgagtctgatcaacggtccttgaactgtgcctcacgcttggcgatgaatgcgg                                                               >  1:1211498‑M2/1‑49 (MQ=255)                                                                                                                                                                                                          aaCGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCaa                                  >  2:686807/1‑234 (MQ=37)                                                                                                                                                                                                           aCGCAGGCCTTGCGGAGGCAGGGGACGGGCATccatgcccgtcacctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagaagcaaaatcaaaagccgaagcgagagcgagagcgaga                                                                                                                 <  1:125491‑M1/154‑123 (MQ=255)                                                                                                                                                                                                                    ttGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGc                                                                        <  1:1023841/186‑1 (MQ=31)                                                                                                                                                                                                                    ttGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCg                                                                      >  1:862609/1‑188 (MQ=31)                                                                                                                                                                                                                    ttGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCg                                                                      <  2:862604/188‑1 (MQ=31)                                                                                                                                                                                                                       cGGAGGCAGGTGACGGGCATGGATGCCCGTCAcctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagaagcaaaatcaaaagccgaagcgagagcgagagcgagagcgagagcgagagcgagagcatcgggatcttgc                                                                                <  1:809095‑M1/175‑144 (MQ=255)                                                                                                                                                                                                                         gAGGCAGGTGACGGGCATGGATGCCCGTCAcctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagcag                                                                                                                                                    >  2:1143647‑M1/1‑30 (MQ=255)                                                                                                                                                                                                                              aGGTGACGGGCATGGATGCCCGTCAcctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagaagcaaaatcaaaagccgaagcgagagcgagagcgagagcgagagcgagagcgagagcatcgggatcttgccttgattttagctcaatgccccgccgatgccgggcc                                            >  2:823143‑M1/1‑25 (MQ=255)                                                                                                                                                                                                                                gTGACGGGCATccatgcccgtcacctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagaagcaaaatcaaaagccgaagcgagagcgagagcgagagcgagagcgagagcgagagcatcgggatcttgccttgattttagctcaatgccccgccgatgccgggcccgccttagcggtaaagggcggcttggcgaacca           >  1:674256‑M1/1‑11 (MQ=255)                                                                                                                                                                                                                                gTGACGGGCATGGATGCCCGTCAcctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagaagcaaaatcaaaagccgaagcgagagcgagagcgagagcgagagcgagagcgagagcatcgggatcttgccttgattttagctcaatgccccgccgatgccgggcccgccttagcggtaaagggcggcttgg                  <  2:472386‑M1/228‑206 (MQ=255)                                                                                                                                                                                                                                  gACGGGCCTccatgcccgtcacctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagaagcaaaatcaaaagccgaagcgagagcgagagcgagagcgagagcgagagcg                                                                                                  <  1:338166‑M1/146‑138 (MQ=255)                                                                                                                                                                                                                                  gACGGGCATccatgcccgtcacctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagaagcaaaatcaaaagccgaagcgagagcgagagcgagagcgagagcgagagcgagagcatcgggatcttgccttgattttagctcaatgccccgccgatgccgggcccgccttagcggtaaagggcggcttggcgaaccacac        >  1:201550‑M1/1‑9 (MQ=255)                                                                                                                                                                                                                                   aCGGGCATccatgcccgtcacctcccttcgcaggccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagaagcaaaatcaaaagccgaagcgagagcgagagcgagagcaagagcgagagcgagagcatcgggatcttgccttgattttagctcaa                                                                <  2:636100‑M1/179‑172 (MQ=255)                                                                                                                                                                                                                                      ggCATccatgcccgtcacctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagaagcaaaatcaaaagccgaagcgagagcgagagcgagagcgagagcgagagcgagagcatcgggatcttgccttgattttagctcaatgccccgccgatgccgggcccgccttagcggtaaagggcggcttggcgaaccacaccagc    <  1:672222‑M1/236‑232 (MQ=255)                                                                                                                                                                                                                                       gCATccatgcccgtcacctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagaagcaaaatcaaaagccgaagcgagagcgagagcgagagcgagagcgagagc                                                                                                   >  2:860061‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                                        cATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGGCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGt  <  1:1142870/236‑1 (MQ=255)                                                                                                                                                                                                                                         aTccatgcccgtcacctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagcagcaaaatcaaaagccgaagcgagagcgagagcgagagcgagagcgagagcgagagcatcgggatcttgccttgattttagctcaatgcccggccgatgccgggcccgccttagcgggaaagggcg                        >  2:257464‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                          tccatgcccgtcacctcccttcgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgcttagaagcaaaatcaaaagccgaagcgagagcgagagcgagagcgagagcgagagcgagagcatcgg                                                                                        >  2:9504‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                          tGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGtt                        <  1:7063/212‑1 (MQ=38)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                          ACCGCGGCTGCCGCCGGTGATGACAATGACGTTCTCCATGGGTTTGCCAATGGTTTGGGGAAGGGAACATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGT  >  AE015451/4022072‑4022538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.