New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5685899	42 (0.590)	4 (0.060)	4/330	NT	8.8%	coding (994/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver
	?	AE015451	= 5685911	43 (0.640)					coding (982/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver

GGTTGGCCATCGGCCAGCGGGTCTGCCGCCCGCCATTGCAGGTAGCATTCGGCAGCGCTCAGTGCCTCGGCCAAGTGCGTCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGCCGTTCAGGGAGGCTTCCACGTACAACAGAGCCCCCGCCACATCCATCAACACCGCGTCGTCCACCG  >  AE015451/5685679‑5686132                                                                                                                                                                                                                             |                                                                                                                                                                                                                                          ggTTGGCCATCGGCCAGCGGGTCTGCCGCCCGCCATTGCAGGTAGCATTCGGCAGCGCTCAGTGCCTCGGCCAAGTGCGTCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGtt                                                                                                                                                                                                                             >  1:794073‑M2/1‑233 (MQ=255)       ccATCGGCCAGCGGGTCTGCCGCCCGCCATTGCAGGTAGCATTCGGCAGCGCTCAGTGCCTCGGCCAAGTGCGTCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGTGCtcc                                                                                                                                                                                                                                    >  1:392831/1‑220 (MQ=255)         aTCGGCCAGCGGGTCTGCCGCCCGCCATTGCAGGTAGCATTCGGCAGCGCTCAGTGCCTCGGCCAAGTGCGTCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGttgccggggc                                                                                                                                                                                                                     <  1:633809‑M2/235‑11 (MQ=255)         aTCGGCCAGCGGGTCTGCCGCCCGCCATTGCAGGTAGCATTCGGCAGCGCTCAGTGCCTCGGCCAAGTGCGTCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGttgccggggc                                                                                                                                                                                                                     <  1:926310‑M2/235‑11 (MQ=255)                                                ttCGGCAGCGCTCAGTGCCTCGGCCAAGTGCGTCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAg                                                                                                                                                                                                                  <  1:1284972/199‑1 (MQ=255)                                                 tCGGCAGCGCTCAGTGCCTCGGCCAAGTGCGTCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGttgccggggc                                                                                                                                                                                                                     <  1:962474‑M2/195‑11 (MQ=255)                                                 tCGGCAGCGCTCAGTGCCTCGGCCAAGTGCGTCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGCTCCTTGGCctg                                                                                                                                                                            >  1:1138024/1‑236 (MQ=255)                                                      aGCGCTCAGTGCCTCGGCCAAGTGCGTCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAg                                                                                                                                                                                                                  <  2:1132229/193‑1 (MQ=255)                                                           tCAGTGCCTCGGCCAAGTGCGTCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGttgccggggctgttgcagcagatccgcgggg                                                                                                                                                                                                >  2:824032‑M2/1‑175 (MQ=255)                                                                            tGCGTCAGCTCATCAATCGGCGGCTCTTCCGCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGAt                                                                                                                                                                                           <  1:965236/194‑1 (MQ=255)                                                                                 cAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCAcc                                                                                                                                             >  1:1095645/1‑235 (MQ=255)                                                                                 cAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCAc                                                                                                                                              <  2:706539/234‑1 (MQ=255)                                                                                  aGCTCATCCATCGGCGGCTCTTCCTCCCGGTGCTGCAACCACCGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCtgctgc                                                                                                                                                                        <  1:130735/207‑1 (MQ=255)                                                                                   gCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAg                                                                                                                                           >  1:723065/1‑235 (MQ=255)                                                                                       atcaATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGc                                                                                                                                                            <  1:965358/214‑1 (MQ=255)                                                                                        tcaATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCctgct                                                                                                                                                                          <  1:600426/199‑1 (MQ=255)                                                                                         caATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGttgccggggc                                                                                                                                                                                                                     >  2:815771‑M2/1‑145 (MQ=255)                                                                                          aaTCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCGGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCt                                                                                                                                         <  1:85351/230‑1 (MQ=255)                                                                                                      ttCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGc                                                                                                                                                            <  1:372271/199‑1 (MQ=255)                                                                                                         ctccAGTTGCTGCACCCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCTTCAACATGGCCAAGGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGttgcc                                                                                                                                                                                                                          >  2:208636‑M2/1‑129 (MQ=255)                                                                                                                     caaccaacGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACCCGTTCAGCGattcatt                                                                                                                                                    >  2:1118807/1‑192 (MQ=255)                                                                                                                     caaccaacGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGCTGCCGGGGCCAGTCGGa                                                                                                                                                                                                             >  2:409764/1‑135 (MQ=255)                                                                                                                             gCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGttgccggggctgttgcagcagatccgcggggcattggccatgtt                                                                                                                                                                                   >  1:1202298‑M2/1‑109 (MQ=255)                                                                                                                             gCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGttgccggggctgttgcagcagatccgcggggcattggccatgtt                                                                                                                                                                                   <  2:1202293‑M2/153‑45 (MQ=255)                                                                                                                                    aTAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCCACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCACCGGCAAcg                                                                                                                                                                                                                                         >  2:34197‑M1/1‑90 (MQ=255)                                                                                                                                             gcAGCCGACAACCAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCaa                                                                                  <  2:1190757/234‑1 (MQ=255)                                                                                                                                              cAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCa                                                                                                                          >  2:1109235/1‑193 (MQ=255)                                                                                                                                              cAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAgg                                                                               >  1:1218950/1‑236 (MQ=255)                                                                                                                                              cAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCAGGCAGGCTGCCTTGGCCGtt                                                                                           >  1:1095533/1‑224 (MQ=255)                                                                                                                                              cAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCAGGCAGGCTGCCTTGGCCGtt                                                                                           <  2:1095528/224‑1 (MQ=255)                                                                                                                                                 ccGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCg                                                                                                                              <  2:1138630/186‑1 (MQ=255)                                                                                                                                                   gACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAcgcctgcagcccttgccggggctgttgcagcagatgcgcggggcattggccatgttgat                                                                                                                                                                                >  1:566843‑M1/1‑75 (MQ=255)                                                                                                                                                         ccgCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCaaa                                                                                 <  1:1221391/221‑1 (MQ=255)                                                                                                                                                         cAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGccc                                                                                                                          >  2:433665/1‑181 (MQ=255)                                                                                                                                                            cTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGAcc                                                                        <  1:641928/229‑1 (MQ=255)                                                                                                                                                              cGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGCCGTTc                                                               >  1:382837/1‑236 (MQ=255)                                                                                                                                                                  cccggccggaAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCaa                                                                                  <  1:301001/211‑1 (MQ=255)                                                                                                                                                                       ccggcAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGCCGTTCAGGGAgg                                                        <  2:978102/234‑1 (MQ=255)                                                                                                                                                                         ggcAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGCCGTTCAGGGAGGCt                                                      <  2:1036557/234‑1 (MQ=255)                                                                                                                                                                               aTCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGCCGTTCAGGGAGGCt                                                      <  1:1257684/228‑1 (MQ=255)                                                                                                                                                                               aTCAACATGGCCAATGCCCCGCGCATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGttgccggggctgttgcagcagatccgcggggcattggccatgttgatgctgccggccgtggccgagctgtttgtc                                                                                                                                                    >  1:566843‑M2/1‑59 (MQ=255)                                                                                                                                                                                  aaCATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAcgcctgcagcccttgccggggctgttgcagcagatccgcggggcattggccatgttgatgctgccggccgtggccgagctgtttgtcggctgcgcaagctatgtgcagc                                                                                                                              >  1:1202298‑M1/1‑44 (MQ=255)                                                                                                                                                                                  aaCATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAcgcctgcagcccttgccggggctgttgcagcagatccgcggggcattggccatgttgatgctgccggccgtggccgagctgtttgtcggctgcgcaagctatgtgcagc                                                                                                                              <  2:1202293‑M1/153‑110 (MQ=255)                                                                                                                                                                                           aaTGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGccc                                                                                                               >  1:318518/1‑159 (MQ=255)                                                                                                                                                                                           aaTGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGCCGTTCAGGGAGGCTTCCAc                                                 <  2:924213/221‑1 (MQ=255)                                                                                                                                                                                           aaTGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGCCGTTCAGGGAGGCTTCCAc                                                 >  1:924218/1‑221 (MQ=255)                                                                                                                                                                                           aaTGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGCCGTTCAGGGAGGCTTCCACGTACAACAGAGcccc                                  >  1:16866/1‑236 (MQ=255)                                                                                                                                                                                               ccccGCGGATCTGCTGCAACAGCCCCGGCAAcgcctgcagcccttgccggggctgttgcagcagatccgcggggcattggccatgttgatgctgccggccgtggccgagctgtttgtcggctgcgcaagctatgtgcagcgttggttgcagcacctggaggaagagccgccgattgatgagctgacgcacttggccgaggcactga                                                            >  2:824032‑M1/1‑31 (MQ=255)                                                                                                                                                                                                   gcgGATCTGCTGCAACAGCCCCGGCATGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGc                                                                                                            <  1:314777/154‑1 (MQ=255)                                                                                                                                                                                                      gATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGcc                                                                   >  2:716723/1‑192 (MQ=255)                                                                                                                                                                                                      gATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGCCGTTCAGGGAGGCTTc                                                    >  2:1153027/1‑207 (MQ=255)                                                                                                                                                                                                             tgcAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCg                                                                                                                              <  2:376434/126‑1 (MQ=255)                                                                                                                                                                                                               cAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGCCGTTCAGGGAGGCTTCCACGTACAACAGAGCCCCCGCCACATCCATCAACAcc               <  1:801445/235‑1 (MQ=255)                                                                                                                                                                                                                 ctggCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGc                                                                                                                                                            >  1:1006341/4‑92 (MQ=255)                                                                                                                                                                                                                 ctggCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGc                                                                                                                                                            <  2:1006336/89‑1 (MQ=255)                                                                                                                                                                                                                   ggCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCa                                                                                                           >  2:970798/2‑139 (MQ=255)                                                                                                                                                                                                                    gCCCCGGCAAcgcctgcagcccttgccggggctgttgcagcagatccgcggggcattggccatgttgatgctgccggccgtggccgagctgtttgtcggctgcgcaagctatgtgcagcgttggttgcagcacctggaggaagagccgccgattgatgagctgacgcacttggccgaggcactgagcgctgccgaatgctacctgcaatggcgggcggcagacccgctggccgat          <  1:633809‑M1/235‑226 (MQ=255)                                                                                                                                                                                                                    gCCCCGGCAAcgcctgcagcccttgccggggctgttgcagcagatccgcggggcattggccatgttgatgctgccggccgtggccgagctgtttgtcggctgcgcaagctatgtgcagcgttggttgcagcacctggaggaagagccgccgattgatgagctgacgcacttggccgaggcactgagcgctgccgaatgctacctgcaatggcgggcggcagacccgctggccgat          <  1:926310‑M1/235‑226 (MQ=255)                                                                                                                                                                                                                    gCCCCGGCAAcgcctgcagcccttgccggggctgttgcagcagatccgcggggcattggccatgttgatgctgccggccgtggccgagctgtttgtcggctgcgcaagctatgtgcagcgttggttgcagcacctggaggaagagccgccgattgatgagctgacgcacttggccgaggcactgagcgctgccga                                                  <  1:962474‑M1/195‑186 (MQ=255)                                                                                                                                                                                                                    gCCCCGGCAAcgcctgcagcccttgccggggctgttgcagcagatccgcggggcattggccatgttgatgctgccggccgtggccgagctgtttgtcggctgcgcaagctatgtgcagcgttggttgcagcacctggaggaagagccgccgattg                                                                                          >  2:815771‑M1/1‑10 (MQ=255)                                                                                                                                                                                                                      cccGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGa                                                                                                                                                                                            <  2:304516/55‑1 (MQ=255)                                                                                                                                                                                                                       ccGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACGCCAGGTAATCGCAGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGcc                                                                                              <  2:10624/148‑1 (MQ=255)                                                                                                                                                                                                                         ggCAAcgcctgcagcccttgccggggctgttgcagcagatccgcggggccttggccatgttgaagctgccggccgtggccgagctgtttgtcggctgcgcaagctatgtgcagcgttgggtgcagcaactggag                                                                                                          >  2:208636‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                         ggCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGCCGTTCAGGGAGGCTTCCACGTACAACAGAGCCCCCGCCACATCCATCAACACCGCGTCGTCCAc    >  1:1246043/1‑236 (MQ=255)                                                                                                                                                                                                                         ggCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGCCGTTCAGGGAGGCTTCCACGTACAACAGAGCCCCCGCCACATCCACCAACACCGcgtc          >  2:856548/1‑230 (MQ=255)                                                                                                                                                                                                                            aacgcctgcagcccttgccggggctgttgcagcagatccgcggggcattggccatgttgatgctgccggccgtggccgagctgtttgtcggctgcgcaagctatgtgcagcgttggttgcagcacctggaggaagagccgccgattgatgagctgacgcacttggccgaggcactgagcgctgccgaatgctacctgcaatggcgggcggcagacccgctggccgatggccaacc  >  1:794073‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                             aGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGCCGTTc                                                               <  2:382832/173‑1 (MQ=255)                                                                                                                                                                                                                             |                                                                                                                                                                                                                                          GGTTGGCCATCGGCCAGCGGGTCTGCCGCCCGCCATTGCAGGTAGCATTCGGCAGCGCTCAGTGCCTCGGCCAAGTGCGTCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGACTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCTCCAAAGGGCCGACCATGCCGTTCAGGGAGGCTTCCACGTACAACAGAGCCCCCGCCACATCCATCAACACCGCGTCGTCCACCG  >  AE015451/5685679‑5686132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.