New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 329278534 (0.480)3 (0.040) 3/330 NT 7.3% coding (2069/3675 nt) PP_2893 conserved exported protein of unknown function
?AE015451 = 3293168 44 (0.650)coding (2452/3675 nt) PP_2893 conserved exported protein of unknown function

GGCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAGTGGCGCCGAGCTGCCGGCCAGCCTTCAGGACCTGTCATTGCAGGCGCTGATTGCCGGCGAGCAGGTGC  >  AE015451/3292936‑3293387
                                                                                                                                                                                                                                        |                                                                                                                                                                                                                            
ggCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCgcc                                                                                                                                                                                                                           >  1:105479‑M2/1‑233 (MQ=255)
 gCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCgcc                                                                                                                                                                                                                           <  1:665149‑M2/235‑4 (MQ=255)
 gCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCgcc                                                                                                                                                                                                                           <  1:524405‑M2/235‑4 (MQ=255)
   cAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCgcc                                                                                                                                                                                                                           >  2:787610‑M2/1‑230 (MQ=255)
         ccccAAGGGCACTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCggg                                                                                                                                                                                                                  >  1:1101869/1‑235 (MQ=255)
            cAAGGGCACTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTgg                                                                                                                                                                                                              <  1:427263/236‑1 (MQ=255)
               gggCACTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCTCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCgcct                                                                                                                                                                                                                          >  1:136667‑M2/1‑218 (MQ=255)
                        cGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTgg                                                                                                                                                                                                  >  1:257980/1‑236 (MQ=255)
                            gTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCGGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCgcctggc                                                                                                                                                                                                                       >  1:113354‑M2/1‑205 (MQ=255)
                                aTGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCa                                                                                                                                                                                          <  1:1064774/236‑1 (MQ=255)
                                    cAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCt                                                                                                                                                                                                                >  1:823325/1‑210 (MQ=255)
                                    cAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCAt                                                                                                                                                                                         >  2:561905/1‑233 (MQ=255)
                                                 cttcgcgtgcgcgACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGa                                                                                                                                                                         >  1:706795/4‑236 (MQ=255)
                                                     gcgtgcgcgACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCgggt                                                                                                                                                                                                   >  2:664106/1‑204 (MQ=255)
                                                      cgtgcgcgACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACg                                                                                                                                                                      >  1:933175/1‑234 (MQ=255)
                                                          ggcgaCAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCgcct                                                                                                                                                                                                                          >  1:1037445‑M2/2‑175 (MQ=255)
                                                            cgACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGACAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGc                                                                                                                                                                <  1:1273898/234‑1 (MQ=255)
                                                             gACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCgg                                                                                                                                                             >  1:407093/1‑236 (MQ=255)
                                                                               gATTTCCCTTATCAGGCCCTGGGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCgcct                                                                                                                                                                                                                          >  1:864176‑M2/1‑154 (MQ=255)
                                                                                          tCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGGCTGGACCTGTCGGTGgccc                                                                                                                                                                                               >  2:1044243/1‑174 (MQ=255)
                                                                                          tCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGGCTGGACCTGTCGGTGgccc                                                                                                                                                                                               <  1:1044248/174‑1 (MQ=255)
                                                                                                 cTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATgg                                                                                                                                                                             >  1:487008/1‑184 (MQ=255)
                                                                                                 cTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTg                                                                                                                                                                  <  2:257976/195‑1 (MQ=255)
                                                                                                  tGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCtt                                                                                                                         >  1:458653/1‑235 (MQ=255)
                                                                                                             aGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCa                                                                                                             <  1:243509/236‑1 (MQ=255)
                                                                                                                  gTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTTCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCa                                                                                                        >  1:1068152/1‑236 (MQ=255)
                                                                                                                          cgcgGCGTATCGATACGCGCCTGGCGTTTCGCGGTGGGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGc                                                                                                                                                                                   <  2:1062534/153‑1 (MQ=255)
                                                                                                                           gcggcgTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGt                                                                                                                                             <  1:702509/190‑1 (MQ=255)
                                                                                                                            cggcgTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGcccct                                                                                                                                                                               >  2:99500/1‑153 (MQ=255)
                                                                                                                              gcgTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGgcg                                                                                                                  <  1:1063334/214‑1 (MQ=255)
                                                                                                                               cgTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCa                                                                                                                                                     >  2:489819/1‑178 (MQ=255)
                                                                                                                               cgTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCCATGGCAGTGGTCg                                                                                                                                        >  1:38053/1‑191 (MQ=255)
                                                                                                                                    cGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCAt                                                                                                                                                                                         >  2:478638/1‑137 (MQ=255)
                                                                                                                                     gATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCaa                                                                                                       <  2:407088/218‑1 (MQ=255)
                                                                                                                                          gcgcCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCaa                                                                                                       <  1:154701/213‑1 (MQ=255)
                                                                                                                                              cTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGa                                                                            >  1:908028/1‑236 (MQ=255)
                                                                                                                                                     ttCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCg                                                                                                                                                                          <  1:747750/135‑1 (MQ=255)
                                                                                                                                                     ttCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGAGCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAg                                                                      <  1:535576/235‑1 (MQ=255)
                                                                                                                                                        gcgGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTc                                                                                                                                  <  1:354003/172‑1 (MQ=255)
                                                                                                                                                                   cTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGgc                                                                                                                                                                                                 >  2:930615/1‑98 (MQ=255)
                                                                                                                                                                             tGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCgcctggccggagcgccagcagtgggccccgaagtcgagctggccgctggccagccgctgcaggcgtgcaggcgcctgcaactgccactcctggccaccggcctggattcggccagtggccagtcggccgcgccagtcacctttgttcaactggccatccaggccaaggtcgagct                                               <  1:579786‑M2/235‑176 (MQ=255)
                                                                                                                                                                               aaCGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAGTGGCGCCGAGCTGCCg                                                      <  1:173030/225‑1 (MQ=255)
                                                                                                                                                                                   tCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCgcctggccggagcgccagcagtgggccccgaagtcgagctggccgctggccagccgctgcagccgggcaggcgcct                                                                                                                                                  <  2:342439‑M2/130‑77 (MQ=255)
                                                                                                                                                                                   tCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAGTGGCGCCGAGCTGCCGGc                                                    <  2:694484/223‑1 (MQ=255)
                                                                                                                                                                                   tCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAGTGGCGCCGAGCTGCCGGc                                                    >  1:694489/1‑223 (MQ=255)
                                                                                                                                                                                        ccccgGCTCGATCCGCTGGGCAAGAACAACCCGTTGTCGGGTGATTTCCgcctggccggagcgccagcagtgggccccgaagtcgagctggccgctggccagccgctgcaggcgtgcaggcgcctgcaactgccactcctggccaccggcctggattcggccagtggccagtcggccgcgccagtcacctttgttcaactggccatccaggccaaggtcgag                                                 >  2:579781‑M2/2‑49 (MQ=255)
                                                                                                                                                                                               tCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGGTCAGCGGAGGCGAAGTCAGTGGCGCCGAg                                                            >  1:857630/1‑203 (MQ=255)
                                                                                                                                                                                               tCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAGTGGCGCCGAGCTGCCGGCCAGCCTTCa                                           <  2:823320/220‑1 (MQ=255)
                                                                                                                                                                                               tCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAGTGGCGCCGAGCTGCCGGCCAGCCTTCAGGACCTGTCATTGCAg                           >  1:762445/1‑236 (MQ=255)
                                                                                                                                                                                                cGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAGTGGCGCCGAGCTGCCGGCCAGCCtt                                             >  2:33485/1‑217 (MQ=255)
                                                                                                                                                                                                  aTCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGgcg                                                                                                                  <  2:1068147/146‑1 (MQ=255)
                                                                                                                                                                                                  aTCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAGTGGCGCCGAGCTGcc                                                       <  1:249699/205‑1 (MQ=255)
                                                                                                                                                                                                   tCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAGTGGCGCCGAGCTGCCGGCCAGCCTTCAgg                                         <  2:665144/218‑1 (MQ=255)
                                                                                                                                                                                                      gCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAGTGGCGCCGAGCTGCCgg                                                     <  2:933170/203‑1 (MQ=255)
                                                                                                                                                                                                      gCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAGTGGCGCCGAGCTGCCGGCCAGCCt                                              >  2:1070631/1‑210 (MQ=255)
                                                                                                                                                                                                                         ttGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAGTGGCGCCGAGCTGCCGGCCAGCCTTCAGGACCTGTCATTGCAGGCGCTGATTGCCGGCGAGCAGGTGc  <  1:1007152/235‑1 (MQ=255)
                                                                                                                                                                                                                             cGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGt                                                                         >  2:35681/1‑160 (MQ=255)
                                                                                                                                                                                                                             cGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAGTGGCGCCGAGCTGCCGGCCAGCCTTCAGGACCTGTCATTGCAGGCGCTGATTGCCGGCg           >  2:1081561/1‑222 (MQ=255)
                                                                                                                                                                                                                                        |                                                                                                                                                                                                                            
GGCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTCAATGGCAGTGGTCGGCTTTCAGGCACCTTGCTGGCGCCTCAGGTCAACGGCAACCTGATGCTCAGCGGAGGCGAAGTCAGTGGCGCCGAGCTGCCGGCCAGCCTTCAGGACCTGTCATTGCAGGCGCTGATTGCCGGCGAGCAGGTGC  >  AE015451/3292936‑3293387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.