| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 3875611 = | 73 (1.020) | 4 (0.060) | 4/332 | NT | 5.9% | coding (103/1212 nt) | xcpS | Type II secretion pathway protein XcpS |
| ? | AE015451 | 3875688 = | 58 (0.860) | coding (180/1212 nt) | xcpS | Type II secretion pathway protein XcpS | |||||
TCGATGGGCAAGGACGGCCAGCCGGGTGGCGATGGCGAAAATGCCGAAGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCCGCTCGCTGTCCCAGGCGCTGGGCCAGCAACCGCGGGTATTCCCGCCGTTGTATGTGG > AE015451/3875453‑3875908 | tCGATGGGCAAGGACGGCCAGCCGGGTGGCGATGGCGAAAATGCCGAAGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGgcgc > 1:763703/1‑236 (MQ=255) gCAAGGACGGCCAGCCGGGTGGCGATGGCGAAAATGCCGAAGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGaa > 1:1212677/1‑235 (MQ=255) gCCAGCCGGGTGGCGATGGCGAAAATGCCGAAGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCg < 1:1097648/236‑1 (MQ=255) aGCCGGGTGGCGATGGCGAAAATGCCGAAGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCCTGGCCTGGCGCCGTGAAGCGGCAGTCGAc > 1:127460/1‑235 (MQ=255) cggggTGGCGATGGCGAAAATGCCGAAGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTg < 1:396604/217‑1 (MQ=255) cGGGTGGCGATGGCGAAAATGCCGAAGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTg < 1:1240538/235‑1 (MQ=255) tggcgatggcgaAAATGCCGAAGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCt < 1:1210705/236‑1 (MQ=255) gcgatggcgaAAATGCCGAAGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCt < 2:557488/234‑1 (MQ=255) cgatggcgaAAATGCCGAAGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCt < 2:443714/233‑1 (MQ=255) atggcgaAAATGCCGAAGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTc < 1:1082570/235‑1 (MQ=255) gcgaAAATGCCGAAGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCgc > 2:658324/1‑218 (MQ=255) gCCGAAGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAAc < 1:1024666/234‑1 (MQ=255) gAAGTTACTAGGTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAAc < 1:32216/231‑1 (MQ=255) aGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCa < 2:763698/234‑1 (MQ=255) cgccaggctttccagtgcgtcgagcagcggcaggccggaattgagcaaggttgacagttcctggctgaacagccccaggtcgaatgccgcttcacggcgccaggccatgccgcgcagcgcgccgccgctgctgcgcaggctgagcacacgcaggccctggtcttcggcctggcgCCGTGAAGCGGCATTCGACCt < 1:317030‑M2/21‑1 (MQ=255) gTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCCTTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCgg > 1:193014/1‑236 (MQ=255) gTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGt > 1:944796/1‑217 (MQ=255) cGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCCGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCCCCGTGAAGCgg > 2:75862/1‑174 (MQ=255) ggCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTg > 1:1262908/1‑235 (MQ=255) cagtgcgtcgatcagcggcaggccggcattgagcaaggttgacagttcctggctgaacagcaccaggtcgaatgccgcttcacggcgccaggccatgccgcgcagcgcgccgccgctgctgcgcaggctgagcacacgcaggccctggtcttcggcctggcgCCGTg < 1:926407‑M2/5‑1 (MQ=255) gCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGa > 1:126719/1‑179 (MQ=255) ccATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGGCAGGaa > 1:948621/1‑200 (MQ=255) cgcTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCgggga > 2:289521/1‑193 (MQ=255) cgcTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACg > 1:921258/1‑235 (MQ=255) ccTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCAt > 1:230213/1‑161 (MQ=255) ccTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGagc > 1:455747/1‑221 (MQ=255) cAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGc > 1:513524/1‑235 (MQ=255) aGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACGTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGaaa < 2:1212672/231‑1 (MQ=255) aGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTg < 1:816381/236‑1 (MQ=255) ggCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGt > 1:565982/1‑170 (MQ=255) ggTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGAGCAGGGCCTGCGCGTGCTCAGCCTGCGCAGCAGGGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGt > 2:561209/1‑138 (MQ=255) gTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCt > 2:855605/1‑226 (MQ=255) gTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCt < 1:855610/226‑1 (MQ=255) gggTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCt > 1:912409/1‑219 (MQ=255) tggtgCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGc > 1:261390/1‑235 (MQ=255) tggtgCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGc < 1:1130279/235‑1 (MQ=255) ggtgCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGcc > 1:1261664/1‑231 (MQ=255) gttcctggctgaacagcaccaggtcgaatgccgcttcacggCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCGGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATGCGACCTGGTGCtgg < 2:468833‑M1/106‑2 (MQ=255) tCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTg > 1:531970/1‑236 (MQ=255) ccagcaccaggtcgcatgccgcttcacggcgccaggccatgccgcgccgcgcgccgccgctgctgcgcaggctgagcacacgcaggccctggtcttcggcctggcgCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAAc < 2:468833‑M2/41‑1 (MQ=255) cGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCgg > 2:311263/1‑116 (MQ=255) cGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATGCGACCTGGTGCTGTTCAGCCAGGaa > 2:32069/1‑145 (MQ=255) aCGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCa < 2:972091/135‑1 (MQ=255) aggtcgaatgccgcttcacggCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGGGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATTCCGGCCTGCCGCTGCTCGACGCACTGGAAAGCCTGGCg < 1:317030‑M1/174‑1 (MQ=255) catgCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGc < 2:276205/95‑1 (MQ=255) cAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACa < 2:504453/204‑1 (MQ=255) cgcgccgcCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGaaa > 2:679730/3‑185 (MQ=255) cacggCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTg < 1:926407‑M1/162‑1 (MQ=255) CGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGa < 2:609227‑M1/193‑1 (MQ=255) CGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCCGCt < 1:1154923‑M1/236‑1 (MQ=255) aCCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGa > 1:115478/1‑202 (MQ=255) gCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTa > 1:949654/1‑214 (MQ=255) gCCTGAGTGTGCTCAGACTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGGGAAGCGGCATTAGAGCTGGTGCTGtta > 1:66711/1‑88 (MQ=255) tgtgCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATTGACGCACTGGAAAGCCt < 1:4800/144‑1 (MQ=255) tgtgCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCCGCTCGCTGTCCCAGGCGCTgg > 1:363356/1‑236 (MQ=255) tgtgCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACGGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGa > 2:898204/1‑129 (MQ=255) gtgCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCCGCTCGCTGTCCCAGGCGCTggg > 1:656643/1‑236 (MQ=255) ctgctgcgcaggctgcgcacatgcaggccctggtcttcggcctggcgCCGTGAAGCGGCATTCGATCTGGTGCTGTTCAGcc < 2:999047‑M2/35‑1 (MQ=255) tCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGa > 1:174897/1‑205 (MQ=255) tCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCCGCTCGCTGTCCCAGGCGCTGGGCCa > 1:936628/1‑235 (MQ=255) agcagcGGCGGCGCGCTGCGCGGCCTGGCCTGGCGCCGTGAAGCGGCCTTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAACGCCTGGCGGCGAAAAGCCCGGCAGCGACAGCGCGCa > 2:253826/1‑160 (MQ=255) cagcGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGcc > 2:1133380/1‑140 (MQ=255) cagcGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCCGCTCGCTGTCCCAGGCGCTGGGCCAGCAACCGCGGGTAt < 1:920742/236‑1 (MQ=255) agcGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTg < 2:701431/177‑1 (MQ=255) agcGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCcgc < 2:1168832/198‑1 (MQ=255) cacacgcaggccctggtcttcggcctggcgCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAGCTGtcagc > 2:252681‑M2/31‑76 (MQ=255) gcgcgcTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCCGCTGTACGCGGGCCGCTCGCTGTCCCAGGCGCTGGGCCAGCCACCGCGGGTa > 1:9335/1‑227 (MQ=255) gcgcgcTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGAGCAAGGTGCTCGcc > 2:1021347/1‑161 (MQ=255) cggcgcGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCCGCTCGCTGTCCCAGGCGCTGGGCCAGc < 1:144048/209‑1 (MQ=255) tGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCCGCTCGCTGTCCCAGGCGCTGGGCCAGCAACCGCGGGt > 2:50657/1‑220 (MQ=255) cgGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCCGCTCGCTGTCCCAGGCGCTGGGCCAGCa < 2:1154918/207‑1 (MQ=255) ggCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGa > 2:37531/1‑130 (MQ=255) agacaggcctggcgCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTGGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCCGCTCGCTGTCCCAGGCGCTGGGCCAGCAACCGCGGGTATTCCCGCCGTTGTATGTgg < 1:92319‑M2/221‑1 (MQ=255) gCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCCGCTCGCTGTCCCAGGCGCTGGGCCAGCAACCGCGGGTATTc < 2:793221/218‑1 (MQ=255) ggcctggcgCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGt > 2:983970‑M2/10‑153 (MQ=255) ggcctggcgCCGGGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCCGCTCGCTGTCCCAGGCGCTGGGCCAGCaa < 2:424422‑M2/193‑1 (MQ=255) ctggcgCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCcgc < 1:450602‑M2/166‑1 (MQ=255) cgcgCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCCGCTCGCTGTCCCAGGCGCTGGGCCAGCAACCGCGGGTATTCCCGCCGTTGTAtgtg < 1:1093815‑M2/220‑1 (MQ=255) | TCGATGGGCAAGGACGGCCAGCCGGGTGGCGATGGCGAAAATGCCGAAGTTACTAGTTGGCAGTAAGGAGAGCGGCCATGCGCTACAGCCTCAAGGCCCTGGGTAGGCAGGGTGTGGTGCAGTTGCAGATCGACGCCGAGGACGCCGACCAGGCCCGCCGCCAGGCCGAAGACCAGGGCCTGCGTGTGCTCAGCCTGCGCAGCAGCGGCGGCGCGCTGCGCGGCATGGCCTGGCGCCGTGAAGCGGCATTCGACCTGGTGCTGTTCAGCCAGGAACTGTCAACCTTGCTCAATGCCGGCCTGCCGCTGATCGACGCACTGGAAAGCCTGGCGGAGAAAAGCCCGGCAGCGACAGCGCGCAAGGTGCTCGCCGAGCTGGTGCGTCAGCTGTACGAGGGCCGCTCGCTGTCCCAGGCGCTGGGCCAGCAACCGCGGGTATTCCCGCCGTTGTATGTGG > AE015451/3875453‑3875908 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |