New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 4945197 | 70 (0.980) | 10 (0.150) | 9/336 | NT | 14.8% | intergenic (+557/+241) | PP_5673/flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein |
? | AE015451 | 4945389 = | 48 (0.700) | intergenic (+749/+49) | PP_5673/flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein |
GCGCGGCGCATCGCGAGCAAGCTCGCTCCTACATTTGTTTCGGGCCAGTTATTCCTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAGTTCGGTGGAGTAATAGATC > AE015451/4945200‑4945612 | gcccggccaggttgttgcgggcgttgctgattaactgagtgcgatccaccgcgagtcctcttgatgcaaaactttgacgcccagggggcgcctgcggctggcattgctagaagctttccaactttgtgatctgctgtgaatcggggtgttcgccgtgaggtttttgtcgcctgtgagatcgagcgccgcGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGcc < 1:1075905‑M2/42‑1 (MQ=255) tCGCGAGCAAGCTCGCTCCTACATTTGTTTCGGGCCAGCTATTCCTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAATGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCgcggg > 1:571678/1‑184 (MQ=255) ggcgttgctgattaactgagtgcgatccaccgcgagtcctcttgatgcaaaactttgacgcccagggggcgcctgcggctggcattgctagaagctttccaactttgtgatctgctgtgaatcggggtgttcgccgtgaggtttttgtcgcctgtgagatcgagcgccgcGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGgcgc < 2:918761‑M2/65‑1 (MQ=255) tACATTTGTTTCGGGCCAGTTATTCCTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACg > 2:954270/1‑189 (MQ=255) tCGGGCCAGTTATTCCTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGggcggc > 2:1087659/1‑159 (MQ=255) tCGGGCCAGTTATTCCTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGc > 1:999978/1‑175 (MQ=255) tCGGGCCAGTTATTCCTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCa > 2:793253/1‑234 (MQ=255) ggCCAGTTATTCCTGCGGGATTTACGCGCGACGGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGTTCGCGATGCGCCGCGAGggcggc > 2:1210076/1‑156 (MQ=255) gatccaccgcgagtcctcttgatgcaaaactttgacgcccagggggcgcctgcggctggcattgctagaagctttccaactttgtgatctgctgtgaatcggggtgttcgccgtgaggtttttgtcgcctgtgagatcgagcgccgcCCGCGCGGCGCTCGAGCTCACAGTCAACGCAAAc > 1:614380‑M2/148‑181 (MQ=255) tccaccgcgagtcctcttgatgcaaaactttgacgcccagggggcgcctgcggctggcattgctagaagctttccaactttgtgatctgctgtgaatcggggtgttcgccgtgaggtttttgtcgcctgtgagatcgagcgccgcgcggg < 2:603959‑M2/5‑1 (MQ=255) cAGTTATTCCTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGAt > 1:5829/1‑160 (MQ=255) gCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGac > 2:585880/1‑182 (MQ=255) ccggcgcgcgcgACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGa > 1:619304/7‑178 (MQ=255) ccggcgcgcgcgACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCACCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTCTCGCCGAACCGATCAACTGTCGCGGCGCa > 1:738798/7‑195 (MQ=255) cggcgcgcgcgACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGct > 1:19035/6‑230 (MQ=255) aTTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGc > 1:1069142/1‑153 (MQ=255) ctttgacgcccagggggcgcctgcggctggcattgctagaagctttccaactttgtgatctgctgtgaatcggggtgttcgccgtgaggtttttgtcgcctgtgagatcgagcgccgcCCGCGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCa > 2:1117617‑M2/119‑202 (MQ=255) ccGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGcttgcccttgc > 1:706398/1‑236 (MQ=255) gCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTAccgccg > 1:260954/1‑157 (MQ=255) gCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGcttgcccttgcc > 1:1286558/1‑235 (MQ=255) tACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCgg > 1:1090303/1‑228 (MQ=255) gcgcctgcggctggcattgctagaagctttccaactttgtgatctgctgtgaatcggggtgttcgccgtgaggtttttgtcgcctgtgagatcgagcgccgcGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTgg < 1:303498‑M2/134‑1 (MQ=255) gATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCaag > 2:515001/1‑129 (MQ=255) cGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGAt > 2:93306/1‑137 (MQ=255) cGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCCGGTCGTCCTTCAGTGGCTCTggg > 2:1106306/1‑194 (MQ=255) cGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGcgcg > 2:895111/1‑214 (MQ=255) cGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAacac > 1:443785/1‑235 (MQ=255) cGTACAAACAAGGCGGCCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGGAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGAt > 2:312572/1‑103 (MQ=255) tACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTc > 2:813471/1‑143 (MQ=255) aaacaaGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGCTCTCACAGGCAACg > 2:278708/1‑111 (MQ=255) aaacaaGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAg > 2:615496/1‑167 (MQ=255) aaacaaGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCt > 2:728878/1‑223 (MQ=255) ctttccaactttgtgatctggtgtgaatcggggtgttcgccgtgaggtttttgtcgcctgtgagatcgagcgccgcGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTc < 2:900201‑M2/70‑1 (MQ=255) gTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGggcggc < 1:115569/81‑1 (MQ=255) gTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATc > 1:867149/1‑152 (MQ=255) gTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGgtcgtc > 2:791012/1‑163 (MQ=255) gTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACGGTCGCGGCGCAGGTCCGGCCGGATCGGCAGGCCGTCCTTCAGTGGCTCTGGgc > 2:1201923/1‑180 (MQ=255) gcgcgcgcCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGCACAGATCAACTGTc > 2:863178/1‑127 (MQ=255) cgcgcCGGGCACCGGAGGGACTGGCCCGAAACAAATGTAGGAGCGGGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCg < 2:455993/188‑1 (MQ=255) gcgcCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTggg > 2:1020279/1‑172 (MQ=255) gcgcCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTggg < 1:1020284/172‑1 (MQ=255) acaGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTgg > 2:732056/1‑190 (MQ=255) gaatcggggtgttcgccgtgaggtttttgtcgcctgtgagatcgagcgccgcGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCAc < 2:896522‑M2/169‑1 (MQ=255) ccGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAac > 1:865897/1‑187 (MQ=255) ccGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAac < 2:865892/187‑1 (MQ=255) ccGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCccgccg > 1:498069/1‑230 (MQ=255) gAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGc > 2:732635/1‑140 (MQ=255) gAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGAtctcn > 2:565019/1‑235 (MQ=255) gAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGAtccc > 1:893166/1‑233 (MQ=255) aaCAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCccgc > 2:444315/1‑224 (MQ=255) aTGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATc < 1:1281993/172‑1 (MQ=255) gttttcggcgcctgtgagatcgagcgccgcGCGGGCGGCGTTCGATCTCACAGGCGACGCaagcccag > 2:759400‑M2/31‑65 (MQ=255) tgtcgcctgtgagatcgagcgccgcGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAGTTCg < 2:1115546‑M2/209‑1 (MQ=255) ggcgcctgtgagatcgagcgccgcCCGCGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTc < 1:235451‑M2/95‑1 (MQ=255) gcgagcTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCTCCGCCGGGATCTCCTg > 2:564830/1‑223 (MQ=255) agcTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTggga > 1:369287/1‑164 (MQ=255) gcTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAgg > 1:1079128/1‑196 (MQ=255) cTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGggcgtc > 2:251457/1‑110 (MQ=255) cTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGa > 2:1281988/1‑156 (MQ=255) ttGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAGTTCGGTGGAGTa > 1:584361/1‑235 (MQ=255) cagcgGTGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAac < 1:278169/158‑1 (MQ=255) gcgATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAGtt < 1:528471/219‑1 (MQ=255) gcgATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAGTTCGGTGGAGTAATAGATc < 1:954275/236‑1 (MQ=255) gATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTgg < 2:1069137/144‑1 (MQ=255) gcgccgcGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGGCAGGTACAGCCCCGCCggg > 1:55372‑M2/8‑198 (MQ=255) ggccgcGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGcttgccct < 1:515702‑M2/117‑1 (MQ=255) gccgcGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTACGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAGTTCg < 1:1220082‑M2/209‑1 (MQ=255) cgcGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGc > 1:96767‑M2/4‑203 (MQ=255) cGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCCGGTCGTCCTTCAGTGGCTCTGGGCGct > 2:181966‑M2/2‑112 (MQ=255) | GCGCGGCGCATCGCGAGCAAGCTCGCTCCTACATTTGTTTCGGGCCAGTTATTCCTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATCGGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAGTTCGGTGGAGTAATAGATC > AE015451/4945200‑4945612 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |