| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 5575228 = | 69 (0.970) | 5 (0.080) | 5/322 | NT | 7.2% | coding (66/1041 nt) | motB | Flagellar motor rotation protein |
| ? | AE015451 | 5575242 = | 66 (1.010) | coding (52/1041 nt) | motB | Flagellar motor rotation protein | |||||
ATTGATGGTTTTGTCCGGCGCCATCTCCGGGGAACCCCCCAGGTCGATGACATAAGGCGTGCCACTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGCCACCAGCGAAGCCTTGATCGATTCGTAGAGGTTCAGTTCTTCCTTGGCATCGTGCT > AE015451/5575024‑5575466 | aTTGATGGTTTTGTCCGGCGCCATCTCCGGGGAACCCCCCAGGTCGATGACATAAGGCGTGCCACTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGACGTCGGCAAAGGCGATTTTCCAGGCGTCACCATGGTGgccgccgcc > 2:53996/1‑225 (MQ=255) aaggcttcgctggtggcctcggcgtcgggcatgccaccttcgctggcggtcgagttcgggcgcaaggtgctgtaccccaagcaccgcccaagcttcgccgaactggaacaagcggttcgcggtcgctgagtcatggagaacaatcagcccatcatcgtcaagcgcgtcaagcgctttggcggcgGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACgatga < 1:976705‑M1/47‑1 (MQ=255) tcCGGGGAACCCCCCAGGTCGATGACATAAGGCGTGCCACTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGAtt < 1:685543/236‑1 (MQ=255) gAACCCCCCAGGTCGATGACATAAGGCGTGCCACTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTtctc < 1:78339/236‑1 (MQ=255) cAGGTCGATGACATAAGGCGTGCCACTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGatgatg < 2:109567/214‑1 (MQ=255) aGGTCGATGACATAAGGCGTGCCACTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAgcgcttgacg > 2:112433/1‑198 (MQ=255) gTCGATGACATAAGGCGTGCCACTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGc < 1:1143128/236‑1 (MQ=255) aCATAAGGCGTGCCACTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACcgc < 1:1107989/235‑1 (MQ=255) cATAAGGCGTGCCACTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGa < 1:28944/209‑1 (MQ=255) cATAAGGCGTGCCACTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGa > 1:823844/1‑236 (MQ=255) gCCACTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTtctc < 1:802827/207‑1 (MQ=255) gCCACTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTtctc > 2:802822/1‑207 (MQ=255) cACTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACgat > 2:1063215/1‑187 (MQ=255) aCTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGCCgat > 2:28943/1‑186 (MQ=255) aCTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGaa > 1:1079850/1‑224 (MQ=255) aCTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGaa > 1:816434/1‑224 (MQ=255) aCTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCa > 1:998340/1‑236 (MQ=255) aCTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCa > 1:937685/1‑236 (MQ=255) aCTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGCGGCCGCCGCCAAAGcgcttgacgcgcttgacg > 2:217661/1‑184 (MQ=255) aCTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCCAAGTCGGCAAAGGCGCTTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAgcgctt > 2:286243/1‑171 (MQ=255) ctctCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGa < 1:292130/195‑1 (MQ=255) ctctCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGa > 2:292126/1‑195 (MQ=255) ctctCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCa > 1:1197899/1‑235 (MQ=255) tcGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTc < 1:846457/236‑1 (MQ=255) cGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAgcgcttg < 2:51076/167‑1 (MQ=255) aTAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTgg < 1:788559/236‑1 (MQ=255) aTAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTg < 1:827688/235‑1 (MQ=255) aTAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTg < 1:1064824/235‑1 (MQ=255) tAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGc > 1:372366/1‑211 (MQ=255) gggTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTc < 2:824238/221‑1 (MQ=255) ccTGGAAGTAGCCGTCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGTCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGc < 1:701311/236‑1 (MQ=255) gAAGTAGCCGGGAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCGCAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACga < 2:416983/158‑1 (MQ=255) gAAGTAGCCGGCAATGGCGATCTTCTGCGCAGGCGTGGACGTGGACAACAGCCACAGAACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGAGTGTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGc < 2:64020/166‑1 (MQ=255) aaGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTggc > 1:611663/1‑235 (MQ=255) gTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTgg < 2:925288/233‑1 (MQ=255) gCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTTGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGa < 2:645341/163‑1 (MQ=255) cGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAg > 1:1236853/1‑235 (MQ=255) gCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAg > 2:406721/1‑200 (MQ=255) ttcgccgaactggaacaagcggttcgcggtcgctgaggcatggagaacaatcagcccatcatcgtcaagcgcgtcaagcgcctttgcggccGCCACCATGGTGCCCGCCGCCAAAGCGCGTGACGCGCTTGACGATGAAGGGCTGATCGTTCTCCAggacgca < 1:1246689‑M1/72‑4 (MQ=255) cTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTGCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGAtt < 2:73921/144‑1 (MQ=255) tGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTg > 2:1022899/1‑196 (MQ=255) tGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGc > 1:663058/1‑236 (MQ=255) ccGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGaa > 1:503090/1‑236 (MQ=255) gTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACt > 2:568855/1‑144 (MQ=255) tGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGa < 1:243352/128‑1 (MQ=255) gcggttcgcggtcgctgagtcatggagaacaatcagcccatcatcgtcaagcgcgtcaagcgctttggcggcggccaccatggtggcCGCCGCCAAAGCGCTTGACGCGCTGGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGa > 2:976700‑M2/88‑155 (MQ=255) tcgcggtcgctgagtcatggagaacaatcagcccatcatcgtccagcgcgtcaagcgctttggcggcgGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGc > 2:976700‑M1/69‑155 (MQ=255) cggtcgctgagtcatggagaacgatcagcccatcatcgtcaagcgcgtcaagcgctttggcggcggccaccatggtggcCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGc < 1:1276287‑M2/60‑1 (MQ=255) aGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGc < 1:547415/235‑1 (MQ=255) ccACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGaa > 2:519563/1‑207 (MQ=255) ccACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCAt > 1:215810/1‑231 (MQ=255) gctgagtcatggagaacaatcagcccatcatcgtcaagcgcgtcaagcgctttggcggcgGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATCGTTCTCCATGACTCAGCGACcg < 1:1276287‑M1/79‑1 (MQ=255) tgcgtcctggagaacgatcagcccttcatcgtcaagcgcgtcacgcgctttggcggcgggcaccatggtggcGGCCGCAAAGGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGCCTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGaa < 1:1246689‑M2/91‑1 (MQ=255) ccAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGa > 2:261431/1‑204 (MQ=255) ggAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGAc < 1:623321/227‑1 (MQ=255) ggAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGAc > 2:623316/1‑227 (MQ=255) aagaaCGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGcc > 1:299674/1‑221 (MQ=255) agaaCGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGccac > 1:375030/1‑235 (MQ=255) acaatcagcccatcttcgtcaagcgcgtcaagcgctttggcggcgGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACgatga > 2:834676‑M1/46‑92 (MQ=255) gCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAg > 1:252737/1‑225 (MQ=255) catcatCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGaa > 2:643432/1‑202 (MQ=255) catcatCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGCCACCAGCGaa > 1:620552/1‑235 (MQ=255) catcatCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGCCACCAGCGAAg > 1:458639/1‑236 (MQ=255) atcGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGCCACCAGCGAAGCCt < 1:519568/235‑1 (MQ=255) tcGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGCCACCAGCGAAGCCTTg > 1:1244729/1‑236 (MQ=255) ccGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGCCACCAGCGAAGCCTTGATc > 1:259973/1‑236 (MQ=255) tcatcgtcaagcgcgtcaagcgctttggcggcggccaccatggtggcCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGCCACCAGCGAAGCCtt < 1:976705‑M2/184‑1 (MQ=255) tcatcgtcaagcgcgtcaagcgctttggcggcggccaccatggtggcCGCCGCCAAAGCGCTTGACGCGCTTGACGAAGATGGGCTGATTGt > 2:834676‑M2/48‑92 (MQ=255) gTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCCCCATGGTGGCGGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGc < 1:129887/185‑1 (MQ=255) tGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGCCACCAGCGAAGCCTTGATCGAt < 1:472256/236‑1 (MQ=255) gAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGcgcttgacgcgcttgacg > 2:1046087/1‑70 (MQ=255) gAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGCCACCAGCGAAGCCTTGATCGATTCg > 1:179420/1‑235 (MQ=255) tCGGCAAAGGCGATTTTCCAGGCGTCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGCCACCAGCGAAGCCTTGATCGATTCGTagag < 1:53997/236‑1 (MQ=255) cAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGc < 2:577651/137‑1 (MQ=255) cAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGCCACCAGCGAAGCCTTGATCGATTCGTAGAGGTTc < 1:1192089/236‑1 (MQ=255) ttCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGCCACCAGCGAAGCCTTGATCGATTCGTAGAGGTTCAGCTCTTCCt > 2:1014485/1‑235 (MQ=255) cAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGc < 1:162004/123‑1 (MQ=255) accatggtggcCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGCCACCAGCGAAGCCTTGATCGATTCGTAGAGGTTCAGTTCTTCCTTGGCATCGTGCt > 1:119241‑M2/12‑236 (MQ=255) accagggtggcCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGccacc < 1:119849‑M2/173‑1 (MQ=255) | ATTGATGGTTTTGTCCGGCGCCATCTCCGGGGAACCCCCCAGGTCGATGACATAAGGCGTGCCACTCTCGGAGAAACCAATAGGGTCCTGGAAGTAGCCGGCAATGGCGATCTTCTGCTCAGGCGTGGCCGTGGACAACAGCCACAGCACCAGGAAGAACGCCATCATCGCCGTGGCGAAGTCGGCAAAGGCGATTTTCCAGGCGCCACCATGGTGGCCGCCGCCAAAGCGCTTGACGCGCTTGACGATGATGGGCTGATTGTTCTCCATGACTCAGCGACCGCGAACCGCTTGTTCCAGTTCGGCGAAGCTTGGGCGGTGCTTGGGGTACAGCACCTTGCGCCCGAACTCGACCGCCAGCGAAGGTGGCATGCCCGACGCCGAGGCCACCAGCGAAGCCTTGATCGATTCGTAGAGGTTCAGTTCTTCCTTGGCATCGTGCT > AE015451/5575024‑5575466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |