Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	3287009	3287369	361	24 [23]	[23] 24	[PP_2889]–[xthA]	[PP_2889],[xthA]

CTGGCGTTGGGTGTGGGGGGCTTGGGCGGCTGGCAAGTGCGCGATGCAACCCTGGCGCGGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTATCGGCGCATGCCGGACGGGCAGCGGGTCGATGGCCAGCTGGAGGCGCGGTACTGGTCGCATGGGGC  >  AE015451/3286780‑3287180                                                                                                                                                                                                                                     |                                                                                                                                                                             cTGGCGTTGGGGGTGGGGGGCTTGGGCGGCTGGCAAGTGCGCGATGCAACCCTGGCGCGGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTgg                                                                                                                                                                              <  2:865599/229‑1 (MQ=255)                                 gCAAGTGCGCGATGCAACCCTGGCGCGGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCtt                                                                                                                                                                    >  1:820786/1‑207 (MQ=255)                                 gCAAGTGCGCGATGCAACCCTGGCGCGGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCtt                                                                                                                                                                    <  2:820781/207‑1 (MQ=255)                                                 aCCCTGGCGCGGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAggg                                                                                                                                                  <  1:499719/209‑1 (MQ=255)                                                   ccTGGCGCGGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCa                                                                                                                                                     <  1:1139381/204‑1 (MQ=255)                                                   ccTGGCGCGGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCa                                                                                                                                                     >  2:1139376/1‑204 (MQ=255)                                                                                      ttCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTc                                                                                                                            <  1:346077/194‑1 (MQ=255)                                                                                              acaggTCTGTTTGCCGGCAGTGAAGCCCTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCa                                                                           <  1:359095/231‑1 (MQ=255)                                                                                                   tCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCCAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGc                                                                                                                                            >  2:346072/1‑165 (MQ=255)                                                                                                    cggTTTGCCGGCAGTGAAGCACGGGATATCCAGGCCGGTGCTCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAggg                                                                                                              <  1:183585/192‑1 (MQ=255)                                                                                                                aGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGcc                                                                                                                                           >  2:359090/1‑152 (MQ=255)                                                                                                                               ctCCAGGCCAGTGATCCTGGGCAGGTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGc                                                                                                                                                <  2:315483/132‑1 (MQ=255)                                                                                                                                   gggCCAGTGATCCTGGGCAGTTGCGCGACTGGCGGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAggg                                                                                                                                                  <  2:129385/126‑1 (MQ=255)                                                                                                                                       cAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTATCGGCGCATGCCGGACGGGccg                                              >  2:1264612/1‑221 (MQ=255)                                                                                                                                                              gctggctggGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTc                                                                                                                            <  2:219794/121‑1 (MQ=255)                                                                                                                                                                   ctggGCCGCCAGTGCGGCCGGGTGGGCCAGTGACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAggg                                                                                                              <  2:332594/131‑1 (MQ=255)                                                                                                                                                                           ccATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTATCGGCGCATGCCGGACGGGCAGCGGGTCGATGGCCAGCTGGAGGCGCGGTACTGGTCGc         <  2:810026/224‑1 (MQ=255)                                                                                                                                                                                                 ttACCGGCCCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTATCGGCGCATGCCGGACGGGCAGCGGGTCGATGGCCAGCTGGAGGCGCGGTACTGGTCGCATGGGGc  <  2:848786/209‑1 (MQ=255)                                                                                                                                                                                                 ttACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTATCGGCGCATGCCGGACGGGCAGCGGGTCGATGGCCAGCTGGAGGCGCGGTACTGGTCGCATgggg   <  2:959197/208‑1 (MQ=255)                                                                                                                                                                                                     aggACCTGGCGGGATATGGCTTCAAACCGGGGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCAtt                                                                                                                                      <  2:291576/72‑1 (MQ=255)                                                                                                                                                                                                          cTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTATCGGCGCATGCCGGACGGGCAGCGGGTCGATGGCCAGCTGGAGGCGCGGTACTGGTCGCATGGGGc  <  2:202806/200‑1 (MQ=255)                                                                                                                                                                                                           tGGCGGGATAGGGCTTCAAGCCGGTGGGCGCGCGCTTGCTCAGCAGCGAGCAGGGGCCGGCTGCATTACTGGTATTCGAGGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCt                                                                       <  2:153628/130‑1 (MQ=255)                                                                                                                                                                                                                           cAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTATCGGCGCATGCCGGACGGGCAGCGGGTCGATGGCCAGCTGGAGGCGCGGTACTGGTCGCATGGGGc  <  2:1202185/183‑1 (MQ=255)                                                                                                                                                                                                                                 ggtgggtgCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTATCGGCGCATGCCGGACGGGCAGCGGGTCGATGGCCAGCTGGAGGCGCGGTACTGGTCGc         <  1:973217/170‑1 (MQ=255)                                                                                                                                                                                                                                     |                                                                                                                                                                             CTGGCGTTGGGTGTGGGGGGCTTGGGCGGCTGGCAAGTGCGCGATGCAACCCTGGCGCGGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTATCGGCGCATGCCGGACGGGCAGCGGGTCGATGGCCAGCTGGAGGCGCGGTACTGGTCGCATGGGGC  >  AE015451/3286780‑3287180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑