Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	4839178	4839425	248	24 [23]	[23] 24	[ccoP‑I]–[PP_4254]	[ccoP‑I],[PP_4254]

TGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTTCGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATATCCGCCCCACCATAACCATC  >  AE015451/4838942‑4839257                                                                                                                                                                                                                                            |                                                                                 tGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTTCGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTg                                                                                  <  1:766211/236‑1 (MQ=255)                         acccccgccATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTTCGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCAttt                                                               <  1:300265/228‑1 (MQ=255)                           caccgccATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTTCGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGt                                                                               <  1:392499/211‑1 (MQ=255)                                            cGAACCTGACCCATCCGCAGGCGTTTATCTACGGTTCGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCg                                                                         <  2:584268/202‑1 (MQ=255)                                            cGAACCTGACCCATCCGCAGGCGTTTATCTACGGTTCGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGcgccgc                                       >  1:362237/1‑236 (MQ=255)                                                     cccATCCGCAGGCGTTTATCTACGGTTCGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCcgcg                                  <  1:641655/232‑1 (MQ=255)                                                           cGCAGGCGTTTATCTACGGTTCGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAg                                                                                >  2:641650/1‑180 (MQ=255)                                                                            ggTTCGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATATCCGCCCCACCATaa       <  1:1237759/236‑1 (MQ=255)                                                                                     gttGCCCAGCGGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCAttt                                                               <  2:634978/170‑1 (MQ=255)                                                                                           aaGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATATCCGCCCCACCATAACCa    <  1:529046/223‑1 (MQ=255)                                                                                                             cGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCgcggc                              <  1:1220929/180‑1 (MQ=255)                                                                                                                    gTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATATcc                   <  2:981355/184‑1 (MQ=255)                                                                                                                     tCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATATCCGCCCCACCATAACCATc  <  2:755927/200‑1 (MQ=255)                                                                                                                        ccAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTgc                                                             <  2:346180/138‑1 (MQ=255)                                                                                                                                              gCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATATCCGCCCCACCATAACCa    <  1:239875/173‑1 (MQ=255)                                                                                                                                                                             tgctgGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATATcc                   >  2:633773/1‑127 (MQ=255)                                                                                                                                                                             tgctgGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATATcc                   <  1:633778/127‑1 (MQ=255)                                                                                                                                                                                            ggtATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGAGACGGCCAAGTGCGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGa                        <  2:188789/106‑1 (MQ=255)                                                                                                                                                                                                  gCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATATCCGCCccacca          <  2:362232/115‑1 (MQ=255)                                                                                                                                                                                                         gCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAATGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATATCCGCCCCACCATAAcc     >  1:724245/1‑113 (MQ=255)                                                                                                                                                                                                         gCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATATCCGCCCCACCATAAcc     <  2:724240/113‑1 (MQ=255)                                                                                                                                                                                                                          aGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATATcc                   <  1:930182/82‑1 (MQ=255)                                                                                                                                                                                                                          aGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATATcc                   >  2:930177/1‑82 (MQ=255)                                                                                                                                                                                                                                         aGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCgcggc                              <  2:414828/56‑1 (MQ=255)                                                                                                                                                                                                                                            |                                                                                 TGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTTCGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATATCCGCCCCACCATAACCATC  >  AE015451/4838942‑4839257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑