Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	1421685	1422109	425	25 [23]	[22] 24	PP_1246	conserved exported protein of unknown function

CGGCCCCCGAAGCTCCGGCAGCAGCCCCTGTTGTGCCGCCCGCTCCGGCACCTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTGAGCCTGCGGTAAAGGACAAGGCCGTTTCTTATCTTACGCCGCAA  >  AE015451/1421946‑1422340                                                                                                                                                                     |                                                                                                                                                                                                                                       cGGCCCCCGAAGCTCCGGCAGCAGCCCCTGTTGTGCCGCCCGCTCCGGCACCTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCgg                                                                                                                                                                  >  1:97140/1‑235 (MQ=255)                  gcagcaGCCCCTGTTGTGCCGCCCGCTCCGGCACCTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTCCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGCCCGGCTTTGGTg                                                                                                                                                          >  1:1147109/1‑226 (MQ=255)                   cagcagCCCCTGTTGTGCCGCCCGCTCCGGCACCTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTc                                                                                                                                                                                                         >  1:917230/1‑178 (MQ=255)                                      gcccgcTCCGGCACCTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGa                                                                                                                                                         >  1:265000/1‑207 (MQ=255)                                          gcTCCGGCACCTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCttcg                                                                                                                                                             >  1:411022/1‑197 (MQ=255)                                          gcTCCGGCACCTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGCAGGCAGCTTCGACAAAATCAGCTGGAAGGCt                                                                                                                          >  1:602774/1‑234 (MQ=255)                                            tCCGGCACCTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGt                                                                                                                                                                      >  2:222040/1‑188 (MQ=255)                                            tCCGGCACCTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACaa                                                                                                                                          >  1:722730/1‑216 (MQ=255)                                                   ccTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTTAAGGCAGCTTCGACaaaa                                                                                                                                        >  1:971585/1‑211 (MQ=255)                                                                    cgcAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTgg                                                                                               >  1:1139368/1‑235 (MQ=255)                                                                                 tcggacttcggTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTAt                                                                                   >  1:927408/1‑234 (MQ=255)                                                                                    gacttcggTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCa                                                                              >  1:791075/1‑236 (MQ=255)                                                                                      cttcggTCGCTCGGTGGTCCTGGAAAACCGCAACAAGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTCCGACAAAATCAGCTGGAAGGc                                                                                                                           >  2:537784/1‑189 (MQ=255)                                                                                                tCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTg                                                                      <  2:791070/232‑1 (MQ=255)                                                                                                                     aaCCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTc                                                                                                                                                                                                     >  1:576967/1‑84 (MQ=255)                                                                                                                     aaCCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTc                                                                                                                                                                                                     <  2:576962/84‑1 (MQ=255)                                                                                                                              cAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTGAGCCTGCGGt                                    >  1:38837/1‑236 (MQ=255)                                                                                                                                    acggacggCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGc                                                                                                                                                                             >  1:734875/1‑93 (MQ=255)                                                                                                                                    acggacggCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGc                                                                                                                                                                             <  2:734870/93‑1 (MQ=255)                                                                                                                                    acggacggCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTGAGCCTGCGGTAAAgg                               >  1:1220882/1‑235 (MQ=255)                                                                                                                                                     cAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTGAGCCTGCGGTAAAGGACAAGGCCGTTtcttatc             >  1:24488/1‑236 (MQ=255)                                                                                                                                                                  aGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTGAGCCTGCGGTAAAGGACAAGGCCGTTTCTTATCTTACGCCGCaa  >  2:667450/1‑234 (MQ=255)                                                                                                                                                                     aCCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGa                                                                >  1:533782/1‑169 (MQ=255)                                                                                                                                                                     aCCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGa                                                                <  2:533777/169‑1 (MQ=255)                                                                                                                                                                     |                                                                                                                                                                                                                                       CGGCCCCCGAAGCTCCGGCAGCAGCCCCTGTTGTGCCGCCCGCTCCGGCACCTGCCACAGCAGTCGCCGCAGCCCCCACTTCGGACTTCGGTCGCTCGGTGGTCCTGGAAAACCGCAACCTGATGCAGGTAACGGACGGCACCGGCTGCAAATGGGTACTCAGTACCTCGATCATCGGCGATGGCGACACCCTGTCGTTCGGCACCACCCCGGCCATGCCGTGCCCGGCGTCCGGCTTTGGTGAAGGCAGCTTCGACAAAATCAGCTGGAAGGCTGTGGGTACCTACCGGGGTGATAACTGGACCCGCGTTTATGCTCACCCGAGTGGTTTGATCTTCAACAAGAACCTTGAGCCTGCGGTAAAGGACAAGGCCGTTTCTTATCTTACGCCGCAA  >  AE015451/1421946‑1422340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑