Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	5858236	5858602	367	24 [23]	[23] 25	PP_5134	conserved protein of unknown function

GGTTGGTGGCCTTACCCTCGGCGCGGCGGCGCTGGCCGGGGCGATTGCCGGCGGTGCGCTGCAGACGGCGCGCAACTATGGTTCGCGGTTGATGGGCAAGCTCAAGGGCAAGCGCGAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCACCCGCAGTGGTCCACCCTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCA  >  AE015451/5858444‑5858829                                                                                                                                                                |                                                                                                                                                                                                                                   ggttggtGGCCTTACCCTCGGCGCGGCGGCGCTGGCCGGGGCGATTGCCGGCGGTGCGCTGCAGACGGCGCGCAACTATGGTTCGCGGTTGATGGGCAAGCTCAAGGGCAAGCGCGAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGa                                                                                                                                                                >  2:895691/1‑228 (MQ=255)                             gcgcTGGCCGGGGCGATTGCCGGCGGTGCGCTGCAGACGGCGCGCAACTATGGTTCGCGGTTGATGGGCAAGCTCAAGGGCAAGCGCGAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTcagca                                                                                                                                                                                                                               >  1:1043697/1‑137 (MQ=255)                             gcgcTGGCCGGGGCGATTGCCGGCGGTGCGCTGCAGACGGCGCGCAACTATGGTTCGCGGTTGATGGGCAAGCTCAAGGGCAAGCGCGAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTcagca                                                                                                                                                                                                                               <  2:1043692/137‑1 (MQ=255)                                                     ggTGCGCTGCAGACGGCGCGCAACTATGGTTCGCGGTTGATGGGCAAGCTCAAGGGCAAGCGCGAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAgcgc                                                                                                        >  2:650067/1‑232 (MQ=255)                                                                        gcAACTATGGTTCGCGGTTGATGGGCAAGCTCAAGGGCAAGCGCGAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCAccc                                                                                              >  2:832320/1‑223 (MQ=255)                                                                                       ggTTGATGGGCAAGCTCAAGGGCAAGCGCGAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGCTGATGGAGGCGCTGGATAACCGCGGGCACGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAgg                                                                                                                       >  1:1043094/1‑183 (MQ=255)                                                                                         ttGATGGGCAAGCTCAAGGGCAAGCGCGAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGt                                                                                                                                                                  <  2:462992/138‑1 (MQ=255)                                                                                         ttGATGGGCAAGCTCAAGGGCAAGCGCGAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGt                                                                                                                                                                  >  1:462997/1‑138 (MQ=255)                                                                                         ttGATGGGCAAGCTCAAGGGCAAGCGCGAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCa                                                                                                 >  2:845460/1‑203 (MQ=255)                                                                                         ttGATGGGCAAGCTCAAGGGCAAGCGCGAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCACCCGCAGTGGTCCACCCTGAATCCCGGGGCCaa                                                                >  1:479477/1‑236 (MQ=255)                                                                                              gggCAAGCTCAAGGGCAAGCGCGAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCACCCGCAGTGGTCCACCCTGAATCCCGGGGCCAAGCTGa                                                           >  1:331216/1‑236 (MQ=255)                                                                                                                  gcgAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCACCCGCAGGGGTCCACCCTGAATCCCGGGGCCAAGCTGAATCAg                                                      >  2:904776/1‑221 (MQ=255)                                                                                                                  gcgAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTGGGTCAAAGCGCGGgcgg                                                                                                  >  2:93334/1‑176 (MQ=255)                                                                                                                             gTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCACCCGCAGTGGTCCACCCTg                                                                              >  2:383433/1‑186 (MQ=255)                                                                                                                                 acgacACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCACCCGCAGTGGTCCACCCTGAATCCCgg                                                                      >  1:64237/1‑190 (MQ=255)                                                                                                                                 acgacACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCACCCGCAGTGGTCCACCCTGAATCCCgg                                                                      <  2:64236/190‑1 (MQ=255)                                                                                                                                       cGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGAGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAATCGCGGGCGCACCCGCAGTGGt                                                                                      >  2:679142/1‑168 (MQ=255)                                                                                                                                           aTTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCACCCGCAGTGGTCCACCCTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGa              >  1:63594/1‑236 (MQ=255)                                                                                                                                                    gctgGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCACCCGCAGTGGTCCACCCTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCca     >  1:441913/1‑236 (MQ=255)                                                                                                                                                       ggCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATgcg                                                                                                                                                                                          >  2:164638/1‑52 (MQ=255)                                                                                                                                                       ggCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGcgcg                                                                                                       >  1:1171778/1‑135 (MQ=255)                                                                                                                                                       ggCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCACCCGCAGTGGTCCACCCTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCcagag  >  2:760886/1‑234 (MQ=255)                                                                                                                                                       ggCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCACCCGCAGTGGTCCACCCTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCcag    >  2:991470/1‑234 (MQ=255)                                                                                                                                                                tCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCACCCGCAGTGGTCCACCCTGAATcc                                                                         >  2:484623/1‑156 (MQ=255)                                                                                                                                                                tCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCACCCGCAGTGGTCCACCCTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCa                                           >  2:619279/1‑186 (MQ=255)                                                                                                                                                                |                                                                                                                                                                                                                                   GGTTGGTGGCCTTACCCTCGGCGCGGCGGCGCTGGCCGGGGCGATTGCCGGCGGTGCGCTGCAGACGGCGCGCAACTATGGTTCGCGGTTGATGGGCAAGCTCAAGGGCAAGCGCGAGCTGACCGTGGACGACACGGTATTGCGTCTGCTGGCCTTGCGTCAGCAGCAGTTGATGGTGGCGCTGGATAACCGCGGGCATGCGGCGCAAGACAGCATTCGCCTGGGTGAGCTGGATGAAAAGGCCTGGCGTGAGGGCAAGTTGCCGGAGGCGTTGGTCAAAGCGCGGGCGCACCCGCAGTGGTCCACCCTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCA  >  AE015451/5858444‑5858829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑