| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 757,142 | T→C | 5.2% | F115F (TTT→TTC) | PP_0647 → | conserved membrane protein of unknown function |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 757,142 | 0 | T | C | 5.2% | 267.4 / 3.5 | 77 | F115F (TTT→TTC) | PP_0647 | conserved membrane protein of unknown function |
| Reads supporting (aligned to +/- strand): ref base T (42/31); new base C (2/2); total (44/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.95e-01 | |||||||||||
AATTTCACTGTTGCAACCGCGGCTATCCAAAGTCATCCCGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAGGCTAAAGTACATAGATTTGGGCCTTTGTCTCGTGGATATCCAGGTTGCCTTCTCAGGCCAG > AE015451/756909‑757369 | aaTTTCACTGTTGCAACCGCGGCTATCCAAAGTCATCCCGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTgg > 1:1061195/1‑236 (MQ=255) ttGCAACCGCGGCTATCCAAAGTCATCCCGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCt < 2:555075/233‑1 (MQ=255) cAACCGCGGCTATCCAAAGTCATCCCGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTg‑gg > 2:1133279/1‑233 (MQ=255) gcgGCTATCCAAAGTCATCCCGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGt > 1:158081/1‑236 (MQ=255) tATCCAAAGTCATCCCGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGa < 1:299952/233‑1 (MQ=255) tCCCGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGAtgt < 2:916405/215‑1 (MQ=255) ccGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATACCGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCtt > 2:596843/1‑202 (MQ=255) cGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTggg > 1:130008/1‑215 (MQ=255) cGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTAt < 2:1058942/223‑1 (MQ=255) cGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTAt > 1:1058947/1‑223 (MQ=255) cGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATtcatca > 2:1081975/1‑233 (MQ=255) cGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAgg > 1:481913/1‑236 (MQ=255) cGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAg > 1:119857/1‑235 (MQ=255) gggCAAAGGAAACGGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTggg < 1:648761/206‑1 (MQ=255) gAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGaa < 2:958931/235‑1 (MQ=255) gTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGACGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCaa > 1:19741/1‑213 (MQ=255) ttGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATc > 1:222290/1‑236 (MQ=255) ggCACGCGGCGCTTTGGCGGTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAGAACTTCCCTGCAAAACGTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGTCCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTa < 1:1111357/236‑1 (MQ=255) ggcgCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGAt > 2:457739/1‑214 (MQ=255) gcgcTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGAtgtg < 1:344419/177‑1 (MQ=255) gTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTa < 1:16937/213‑1 (MQ=255) tGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGt > 1:1032116/1‑236 (MQ=255) tttGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGcc > 2:514622/1‑181 (MQ=255) tttGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGa > 1:635516/1‑236 (MQ=255) ttGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGt > 2:1007210/1‑144 (MQ=255) ttGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGt < 1:1007215/144‑1 (MQ=255) ttGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCCCg > 1:96791/1‑183 (MQ=255) ggAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGTCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCATGGCGTGAACGtt > 2:948440/1‑170 (MQ=255) ggAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCaa < 2:850314/158‑1 (MQ=255) ggAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCaa > 1:850319/1‑158 (MQ=255) gAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCcg < 2:622004/215‑1 (MQ=255) aCTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGTTCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGCTTCGATTCCACt > 2:837376/1‑224 (MQ=255) cTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCcg < 2:1061190/210‑1 (MQ=255) tCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCcgat > 1:520450/1‑211 (MQ=255) tCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGt > 1:701359/1‑235 (MQ=255) tCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTc > 1:853014/1‑236 (MQ=255) tGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATa < 2:173916/222‑1 (MQ=255) cGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTaca < 2:222287/236‑1 (MQ=255) gTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTacac > 1:1236316/1‑236 (MQ=255) tACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTTGGGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTacac > 1:412187/1‑236 (MQ=255) tACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCa > 2:291639/1‑215 (MQ=255) ccGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCggg < 1:1205086/236‑1 (MQ=255) ccGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCgg > 1:1160597/1‑235 (MQ=255) ccGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCAATTCGATTCCACTAAAAGCCATaa > 1:879379/1‑208 (MQ=255) ccGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTCGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCg > 2:516017/1‑234 (MQ=255) cGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGa < 1:114468/236‑1 (MQ=255) aGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAg > 1:1086318/1‑235 (MQ=255) gCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATACGTCTGGTTCAGTTACACCACTTcc > 2:9053/1‑226 (MQ=255) gCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCaa > 1:30513/1‑236 (MQ=255) gCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTCGGCTTc > 1:390240/1‑88 (MQ=255) gCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTCGGCTTc < 2:390235/88‑1 (MQ=255) ggACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTCGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAg < 1:516022/236‑1 (MQ=255) aTCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCCCTTCCCgg > 2:1112381/1‑219 (MQ=255) aTCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTc > 2:664818/1‑215 (MQ=255) gaagaaCTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAgg < 1:664823/236‑1 (MQ=255) agaaCTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAgg < 2:853009/234‑1 (MQ=255) tGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCACGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTgg > 2:42054/1‑188 (MQ=255) aaCTTCCCTGCAAAACTTGAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTggg > 2:1225095/1‑76 (MQ=255) aaCTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTggg < 1:1225100/76‑1 (MQ=255) ttCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAgg < 2:296578/221‑1 (MQ=255) cccTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAGGCTAAAGt < 2:496323/226‑1 (MQ=255) aCTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTc < 2:984070/207‑1 (MQ=255) ttAAGTGGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACt < 2:7455/150‑1 (MQ=255) ttGGCTCTTCAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAGGCTAAAGTACATAg < 2:1034906/216‑1 (MQ=255) ggCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAGGCTAAAGt > 2:422514/1‑208 (MQ=255) ctACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAGGCTAAAGTACATAGATTTGGGCCTTTGTCTCGTGGATATc < 1:81112/236‑1 (MQ=255) tACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTTTGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTcc > 2:768772/1‑173 (MQ=255) tACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAGGCTAAAGTACATAGAt < 2:956615/211‑1 (MQ=255) aGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTAt > 2:183578/1‑53 (MQ=255) aGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTAt < 1:183581/53‑1 (MQ=255) gcgTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAGGCTAAAGTACATAGATTTGGGCCTTTGTCTCGTGGATATCCAGGTTGCCt < 2:481908/234‑1 (MQ=255) gTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAGGCTAAAGTACATAGATTTg > 2:1245952/1‑201 (MQ=255) gTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAGGCTAAAGTACATAGATTTGGGCCTTTGTCTCGTGGATATCCAGGTTGCCTtct > 2:613534/1‑235 (MQ=255) ggCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAGGCTAAAGTACATAGATTTGGGCCTTTGTCTCGTGGATATCCAGGTTGCCTTCTCac > 2:903587/1‑235 (MQ=255) ggCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAGGCTAAAGTACATAGATTTGGGCCTTTGTCTCGTGGATATCCAGGTTGCCTTCTCAg > 1:341595/1‑236 (MQ=255) ggCTGACGGCCGTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAGGCTAAAGTACATAGATTTGGGCCTTTGTCTCGTGGata < 2:320755/218‑1 (MQ=255) ggCCTTTGGCTTCGCTT‑GGATGTGGGTGCCCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAGGCTAAAGTACATAGATTTGGGCCTTTGTCTCGTGGATATCCAGGTTGCCTTCTCAGGCCAg < 1:510967/234‑1 (MQ=255) | AATTTCACTGTTGCAACCGCGGCTATCCAAAGTCATCCCGGCCTGGAGCAAATGAAACTGTTTTTGGGCACGCGGCGCTTTGGCGCTCGGTGGCTGCTGATAACGTTTCTTTGTGGAATACTCATTTGGCCTGGCGTACATATGCGCCGAGGGCATCTGGACATCGAAGAACTGGAAAACTTCCCTGCAAAACTTAAGTTGGCTCTACAGGTATCCGCGTGGCTGACGGCCTTTGGCTTCGCTT‑GGATGTGGGTGACCTATGTATTCATCAAGGCGTGAACGTTGATGCCACGGAGATCGTAGCTCTCACTGGATCCTTCGCAAGTCCCGATTCGATTCCACTGAAAGCCATAAGTCTGGTTCAGTTACACCACTTCCCGGGAGGCAATCATAGTGTCAGGCTAAAGTACATAGATTTGGGCCTTTGTCTCGTGGATATCCAGGTTGCCTTCTCAGGCCAG > AE015451/756909‑757369 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |