| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 198,802 | T→C | 5.8% | A1436A (GCT→GCC) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 198,802 | 0 | T | C | 5.8% | 284.6 / 4.4 | 84 | A1436A (GCT→GCC) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base T (41/38); new base C (3/2); total (44/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.55e-01 | |||||||||||
CGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCTCGACGAGGTGGTGGCCAAGCTGACTGCCACTCCGTCGGTCACCGAAGGC > AE015451/198583‑199033 | cgcAGATGCAGGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTc < 1:1248415/221‑1 (MQ=255) aaGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAAcc < 2:772538/234‑1 (MQ=255) aaGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAAcc < 2:1077862/234‑1 (MQ=255) cGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAgcgc > 2:664206/1‑234 (MQ=255) cGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCAc > 1:919041/1‑236 (MQ=255) aacctgGACAAGACCCCGGTCAGCACCGAGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTc < 1:369648/235‑1 (MQ=255) gACCCCGGTCAGCACCGAGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCgg < 2:1227206/201‑1 (MQ=255) ccccGGTCAGCACCGCGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAAcc < 1:303758/206‑1 (MQ=255) cccGGTCAGCACCGAGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACCCCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTa < 2:1020631/216‑1 (MQ=255) cccGGTCAGCACCGAGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAgg < 1:1110452/233‑1 (MQ=255) cccGGTCAGCACCGAGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGc < 1:248683/235‑1 (MQ=255) tCAGCACCGAGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGAc > 1:397972/1‑236 (MQ=255) ccaGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGTCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCg < 2:215333/222‑1 (MQ=255) cGAGGTCACCGACGAGCCAGGGACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAgc < 2:22135/196‑1 (MQ=255) gTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAgg < 1:664211/235‑1 (MQ=255) gaGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCa < 2:26210/155‑1 (MQ=255) agacAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACt < 2:366395/191‑1 (MQ=255) cAGGTCCGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAACCCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTa < 2:320745/217‑1 (MQ=255) ggTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCa < 1:1181272/235‑1 (MQ=255) ttACGCCAGGCAACGAAGGCGATATCGCCCAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGAt < 1:74250/205‑1 (MQ=255) tACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAGACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGc > 1:424387/1‑235 (MQ=255) gCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCgg < 2:270529/162‑1 (MQ=255) aaCGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGTTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACTCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGag > 1:312229/1‑220 (MQ=255) aCGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGGACACTCACGACGCGCAggg > 2:271972/1‑190 (MQ=255) aCGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCg > 2:907031/1‑170 (MQ=255) cGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAgg > 2:139685/1‑149 (MQ=255) aGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTcgg > 1:939761/1‑236 (MQ=255) cGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGt > 1:341851/1‑132 (MQ=255) atatCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGG‑CAGATCAGCCTGGGCATCAACTCGGCGGTg < 1:666548/235‑1 (MQ=255) tatCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTg < 1:794507/235‑1 (MQ=255) tCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCacgac > 1:551825/1‑170 (MQ=255) tCACCCTCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGCCCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAggg < 2:224342/169‑1 (MQ=255) cctCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGaaa < 2:321331/132‑1 (MQ=255) tCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCa < 2:529999/140‑1 (MQ=255) aCGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGt < 1:420962/235‑1 (MQ=255) aGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGAt > 2:36670/1‑155 (MQ=255) aGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTc > 1:799220/1‑236 (MQ=255) tCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGtt < 1:1217254/236‑1 (MQ=255) ggTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCAcag > 1:220364/1‑207 (MQ=255) ccGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTc < 2:919036/224‑1 (MQ=255) cGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGtg < 1:120419/206‑1 (MQ=255) agaACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACg > 2:1251000/1‑195 (MQ=255) agaACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCt > 2:1246754/1‑220 (MQ=255) ttCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCga > 1:387896/1‑197 (MQ=255) cTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTg < 2:723798/224‑1 (MQ=255) aTCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAAcc > 1:608940/1‑190 (MQ=255) aaCACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCAc > 1:880149/1‑56 (MQ=255) aaCACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCt > 2:565745/1‑230 (MQ=255) aaCACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGCTGGGCGGTGctg > 1:667149/1‑203 (MQ=255) aaCACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTAACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTcggcgg > 1:1141334/1‑157 (MQ=255) aaCACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCAc < 2:880144/56‑1 (MQ=255) acacCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGACACCGACACCCTcgacga < 1:1093595/235‑1 (MQ=255) acCGCCCTGGCTCACGACCTGGTCGTGGCCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATCACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACAccc > 1:678401/1‑226 (MQ=255) acCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCcgcg < 2:928748/204‑1 (MQ=255) acCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCcgcg > 1:928753/1‑204 (MQ=255) acCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCTCGACGAgg < 1:422518/235‑1 (MQ=255) cGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCAGCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCt > 2:1266548/1‑110 (MQ=255) cGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAggg < 2:656662/99‑1 (MQ=255) cGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAggg > 1:656667/1‑99 (MQ=255) cGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCgaga < 1:168245/179‑1 (MQ=255) cGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCTcgacg > 1:1206949/1‑230 (MQ=255) cGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGCGGACGCCa > 1:306484/1‑161 (MQ=255) cGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTCGGCATCAACTCGGCGGCGGACGCCACt > 1:390820/1‑163 (MQ=255) cGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGACGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGCGCTGGGCGGTGCTGCGTCGGTCCACGTCACCGACACCCTcgac > 2:1012040/1‑229 (MQ=11) ccTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGtgct < 2:608935/166‑1 (MQ=255) cTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCTCGACGAGgtggtg < 1:1193901/234‑1 (MQ=255) tGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAgg < 1:1092289/111‑1 (MQ=255) tGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAgg > 2:1092284/1‑111 (MQ=255) tGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTcggcggc > 2:357921/1‑147 (MQ=255) tGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCTCGACGAgg > 1:686765/1‑228 (MQ=255) tGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCTCGACGAgg > 1:780574/1‑228 (MQ=255) tGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCTCGACGAGGTGGTGGc > 1:807599/1‑235 (MQ=255) gACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCTCGACGAAGTGGTGGCCAAGCt > 2:1248430/1‑233 (MQ=255) gTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCTcg > 1:1237203/1‑205 (MQ=11) gTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCTcg < 2:1237198/205‑1 (MQ=11) cccTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCAc < 1:923949/190‑1 (MQ=255) cTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGa > 1:586685/1‑191 (MQ=255) cTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGGGCTGCCTTCGAGAACCTCg > 2:68333/1‑157 (MQ=255) gCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCgaga > 2:655989/1‑147 (MQ=255) gCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCgaga < 1:655994/147‑1 (MQ=255) caacaaCGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCTCGACGAggg > 1:283492/1‑200 (MQ=255) caacaaCGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCTCGACGAGGTGGTGGCCAAGCTGACTGCCACTCCGTCGGTCAcc > 1:1195775/1‑235 (MQ=255) aacaacGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCCTCGACGAGGTGGTGGCCAAGCTGACTGCCACTCCGTc > 2:1255051/1‑227 (MQ=255) cGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCTCGACGAGGTGGTGGCCAAGCTGACTGCCACTCCGTCGGTCACCGAAggc > 1:725046/1‑235 (MQ=255) | CGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTCACCGACGAGCCAGGTACGCCAGGCAACGAAGGCGATATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACATCAACACCGCCCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGCGAAACCAGCGCACCGTACACTCACGACGCGCAGGGCGATGACGTCTATCAGGATGCGGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTCGAGTTGGGCGGTGCCGCGAAAGTGGATGTCACCGACACCCTCGACGAGGTGGTGGCCAAGCTGACTGCCACTCCGTCGGTCACCGAAGGC > AE015451/198583‑199033 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |