| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 214,086 | A→C | 5.9% | D6531A (GAC→GCC) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 214,086 | 0 | A | C | 5.9% | 365.5 / 10.1 | 100 | D6531A (GAC→GCC) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base A (38/56); new base C (2/4); total (40/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.31e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
CCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTC > AE015451/213861‑214313 | ccccGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAg < 2:1003708/234‑1 (MQ=255) cccGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCg < 1:854472/236‑1 (MQ=255) ggTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCg < 2:741952/233‑1 (MQ=255) ggTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCg < 2:737030/233‑1 (MQ=255) tCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGAc < 1:945148/236‑1 (MQ=255) aGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGACACCAGCGCCCCGTACACCCAcgccgcc > 2:627892/1‑221 (MQ=255) cACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACg < 2:1188744/233‑1 (MQ=39) aCCGGCGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGc < 1:641748/236‑1 (MQ=255) aCCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGAt < 1:378402/219‑1 (MQ=255) ccGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGc < 1:1265109/215‑1 (MQ=255) cgacgaGCCGGGTACCCCAGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTCCACGTCAACCAGCTGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGc < 2:696208/234‑1 (MQ=255) gaGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCa < 1:872810/236‑1 (MQ=255) aGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACg < 1:646012/225‑1 (MQ=255) gTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGc < 1:218624/203‑1 (MQ=255) ccccAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACg < 2:540364/216‑1 (MQ=255) aGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTg < 1:148681/232‑1 (MQ=255) ggCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGTGATGACGTCTACAACGATGCGGGCCAGATCAGCCTGGGCATCacgtccg > 1:753241/1‑229 (MQ=255) cGACACGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCa < 2:970288/210‑1 (MQ=255) gTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGc > 1:1011484/1‑236 (MQ=255) aGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCAc < 1:1174524/235‑1 (MQ=255) ggTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCg < 1:807809/236‑1 (MQ=255) ccgccgACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACAtt < 1:820135/235‑1 (MQ=255) cgccgACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGAt < 2:768223/163‑1 (MQ=40) aCCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCacga > 2:860949/1‑145 (MQ=38) aCCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATc > 1:495084/1‑185 (MQ=255) aCCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAAc > 1:615139/1‑236 (MQ=255) aCCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCACGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATc < 2:495079/185‑1 (MQ=255) ccAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACAtt < 2:1087590/228‑1 (MQ=255) cAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCACTTcgg > 2:862898/1‑202 (MQ=255) aGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTg < 1:946584/236‑1 (MQ=255) ggCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGcc > 2:848726/1‑167 (MQ=255) ggCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGcc < 1:848731/167‑1 (MQ=255) ggCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGgcg < 2:1122926/209‑1 (MQ=255) aaCGTCAAACCGACCTTCCCTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCa < 1:49006/178‑1 (MQ=255) gACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACAtt > 2:1266277/1‑198 (MQ=255) gACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACAtt < 1:1266282/198‑1 (MQ=255) aCTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGa < 1:820766/236‑1 (MQ=255) aCGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGCTCAAGTGACCGAcaccac > 1:1150545/1‑235 (MQ=255) cGTCACCCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACcg < 1:161992/236‑1 (MQ=255) cGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGacac < 1:965230/231‑1 (MQ=255) gTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGggtg < 1:362408/202‑1 (MQ=255) aaCCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCa > 2:1066709/1‑166 (MQ=255) cAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCt < 2:409575/185‑1 (MQ=255) aGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCAGCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGc < 2:272472/101‑1 (MQ=25) aGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCAGCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCgaga < 2:73955/180‑1 (MQ=255) gCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAAtg > 1:278863/1‑145 (MQ=40) gCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAagta > 1:581935/1‑235 (MQ=255) cgccttGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGAc < 2:900173/211‑1 (MQ=14) cGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAagtagt < 1:937666/235‑1 (MQ=255) gCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCa < 2:581162/128‑1 (MQ=255) tGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGcc > 1:1202625/1‑236 (MQ=255) gCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACcg < 1:631881/220‑1 (MQ=255) ccACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAg > 1:785156/1‑235 (MQ=255) gACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGc < 1:922957/87‑1 (MQ=39) cTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGtt < 2:986185/192‑1 (MQ=255) cGTGACCCTGAGCAACAACCCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCCGATCAGCCTGGGCAt > 1:484784/1‑120 (MQ=255) gTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGAcc > 1:993943/1‑234 (MQ=255) tGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTctg > 2:1109132/1‑124 (MQ=255) cccTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACAtt > 2:657463/1‑148 (MQ=255) cccTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACAtt < 1:657468/148‑1 (MQ=255) tGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACCACGCGCAAGGCGATGACGGCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAAc < 2:1030140/152‑1 (MQ=255) aGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTCCAAGTGACCGacac < 1:882491/191‑1 (MQ=255) gCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACcgc > 2:762343/1‑220 (MQ=255) gCAACAACACCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATACTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGCAACTGGGTGGTGCGGCTTCGGTTCAACTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAAc > 1:709479/1‑235 (MQ=255) caacaaCGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTCGACGCCACCGGCGCTACATTCGAGAACCTGGACCTGGGTGGTGCGGCTTCGGTTc > 2:33834/1‑176 (MQ=255) acaatGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCgaga > 1:1023811/1‑144 (MQ=11) acaatGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCCGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCgaga < 2:1023806/144‑1 (MQ=14) aGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGAc > 2:234929/1‑113 (MQ=255) aGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAgccgg > 1:925597/1‑232 (MQ=255) aGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAAGTCGGCGGTAGACGCCACCg > 2:698987/1‑120 (MQ=255) aGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGAAACGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTcggcg > 2:869396/1‑107 (MQ=255) cACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATc < 1:1054727/235‑1 (MQ=255) aTCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCACGGCg > 2:112599/1‑49 (MQ=255) ggCCGGCGAAACCCGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAggcggc < 2:582063/220‑1 (MQ=255) ccGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCgaga < 1:999495/120‑1 (MQ=255) ccGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGaca > 2:196017/1‑162 (MQ=255) ccGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCAt > 1:1087889/1‑235 (MQ=255) ccGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCAACGGCCCCACATTCGACAACCTGGACCTGGGCGGTGCCGCGTCg > 2:355558/1‑146 (MQ=14) cGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCAt > 2:1205728/1‑234 (MQ=255) cGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATc < 1:1169798/235‑1 (MQ=255) ggCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCAc < 1:418006/224‑1 (MQ=255) gcgcAACCAGCGCGCCGTACCCCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCAc < 1:356017/235‑1 (MQ=255) gCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACg < 1:44578/236‑1 (MQ=255) ccGACACCCGCGCGCCGTACACCCACGCCGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACg < 2:900315/235‑1 (MQ=255) gAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTgg > 1:450641/1‑175 (MQ=255) gAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGAGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACTCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCt < 1:827668/236‑1 (MQ=255) gAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAAACTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACcgacgc > 1:48922/1‑166 (MQ=255) gccttgcgcgcCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGgtggtg > 1:22933/6‑131 (MQ=255) aCCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAggcggc < 1:589022/210‑1 (MQ=255) cgcgcCGTACACCCACGACGCGCAAGGCGCTGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAggcggc < 1:712495/205‑1 (MQ=255) gcgcCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTaca < 1:760186/217‑1 (MQ=255) gcCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAg > 1:822529/1‑236 (MQ=255) gcCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGGGCGGCGTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCGACACCATCAcac > 2:135919/1‑222 (MQ=255) cGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAggcggc < 2:993938/200‑1 (MQ=255) cGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGAt < 1:1205733/236‑1 (MQ=255) tACACCCACGCTGCGCAAGGTGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACAtt < 2:448685/95‑1 (MQ=14) tACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAAGTCGGCGGTGGAc > 2:375347/1‑78 (MQ=255) acacCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCACGTCGGCGGTGGACGCCACCg > 2:943118/1‑84 (MQ=14) cacCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCAc < 2:310611/216‑1 (MQ=255) cacCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTc > 1:1115129/1‑236 (MQ=255) | CCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTC > AE015451/213861‑214313 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |