| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 311,371 | Δ1 bp | 7.4% | coding (1005/2346 nt) | PP_0256 ← | putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 311,371 | 0 | G | . | 7.4% | 192.7 / 7.9 | 54 | coding (1005/2346 nt) | PP_0256 | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (30/20); new base . (2/2); total (32/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.65e-01 | |||||||||||
CTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGCGGTCACTGTTGGTCAGCATTTCCAGTGGGTTCTGGGGGTGCTGGAAGCGCTCCAGACCACGCTCCTTGAGCGGGT > AE015451/311179‑311606 | cTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACg > 1:274440/1‑235 (MQ=255) tGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGtt < 1:629023/208‑1 (MQ=255) gCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGcc > 1:612064/1‑236 (MQ=255) tGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCg > 1:355376/1‑236 (MQ=255) tGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGt > 1:268489/1‑189 (MQ=255) ggTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACt > 1:339185/1‑236 (MQ=255) ggTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGGTCCCATTGCAGGACGAACt > 1:196559/1‑236 (MQ=255) gCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAg < 2:559830/166‑1 (MQ=255) gCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAg > 1:559831/1‑166 (MQ=255) ccATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCAt > 2:336659/1‑235 (MQ=255) ccATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCGGGGCTTCGCGTTCCCAATGCAggcc > 1:159474/1‑221 (MQ=255) cacaCGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATg > 1:664305/1‑235 (MQ=255) acGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTc > 2:592083/1‑234 (MQ=255) gCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTcg > 1:485413/1‑182 (MQ=255) gCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTcg < 2:485412/182‑1 (MQ=255) gCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCa > 1:709384/1‑236 (MQ=255) gCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCg < 2:506596/160‑1 (MQ=255) cccTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCg < 1:370299/159‑1 (MQ=255) cccTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCg > 2:370298/1‑159 (MQ=255) cTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCg < 2:355375/218‑1 (MQ=255) gTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTg > 2:612899/1‑180 (MQ=255) tGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATC‑ACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGc < 1:727012/175‑1 (MQ=255) tGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATC‑ACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGc > 2:727011/1‑175 (MQ=255) gcgGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGt > 2:657026/1‑208 (MQ=255) gcgGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGt < 1:657027/208‑1 (MQ=255) gcgGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGc > 1:613206/1‑236 (MQ=255) gcgGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGGTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGcc > 1:166255/1‑212 (MQ=255) gcgGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATC‑ACGCCATGGCCATGTTCGGc < 1:86020/109‑1 (MQ=255) gcgGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATC‑ACGCCATGGCCATGTTCGGc > 2:86020/1‑109 (MQ=255) ggCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCg < 1:336660/235‑1 (MQ=255) gCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCa < 2:339184/214‑1 (MQ=255) ccAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATaa > 1:282380/1‑111 (MQ=255) ccAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATaa < 2:282379/111‑1 (MQ=255) cAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCg < 1:609091/110‑1 (MQ=255) cAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCg > 2:609090/1‑110 (MQ=255) ggCCGGACTGTGCCGGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGCGGTCACTGTTGGt < 1:410049/235‑1 (MQ=255) ccGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGt < 2:446821/215‑1 (MQ=255) tgtgCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGc > 2:667219/1‑214 (MQ=255) tgtgCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGc < 1:667220/214‑1 (MQ=255) cTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGCGGTCACTGTTGGTCAGCATTTCCAGTg > 1:45304/1‑236 (MQ=255) ggATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCgcgcc > 2:151189/1‑152 (MQ=255) gACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAGCTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGCGGTCACTGTTGGTCAGc > 1:76990/1‑216 (MQ=255) gACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGCGGTCACTGTTGGTCAGCATTTCCAGTGGGGTCTgggg > 1:233069/1‑236 (MQ=255) ccACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGCGGTCACTGTTGGTCAGCATTTCCAGTGGGTTCTGGGGGt > 1:321497/1‑236 (MQ=255) ggcgtCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGCGGTCACTGTTGGTCAGCATTTCCAGTGGGTTCTGGGGGTGCTGGAAgc > 1:703465/1‑236 (MQ=255) cgtCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGc < 2:735443/186‑1 (MQ=255) tCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGCGGTCACTGTTGGTCAGCATTTCCAGTg > 1:635151/1‑211 (MQ=255) tCCACCACGGCCAGGTACTCATCGACGCCAAGGCCATGTTCGGCGATAAAGGCGCGGTCGACCACGGCCGGtt > 2:397238/1‑73 (MQ=255) cacGGCCCGGTCCTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGCGGTCACTGTTGGTCAGCATTTCCAGTGGGTTCTGGGGGTGCTGGAAGCGCTCCAGAc < 1:234233/236‑1 (MQ=255) ggCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGCGGTCACTGTTGGTCAGCATTTCCAGTGGGTTCTGGGGGTGCTGGAAGCGCTCCAGAc < 2:613205/233‑1 (MQ=255) ggTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATg < 1:417772/128‑1 (MQ=255) ggTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGAGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATg > 2:417771/1‑128 (MQ=255) aTCGCCGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGCGGTCACTGTTGGTCAGCATTTCCAGTGGGTTCTGGGGGTGCTGGAAGCGCTCCAGACCACGCTCCTTGAGc < 1:612900/235‑1 (MQ=255) tCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGCGGTCACTGTTGGTCAGCATTTCCAGTGGGTTCTGGGGGTGCTGGAAGCGCTCCAGACCACGCTCCTTGAGc < 1:644257/234‑1 (MQ=255) gACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCCTGTCGCCCCCCCGGGCCGGGCgg > 2:91909/1‑139 (MQ=255) gACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGTGCCGGGCGgac > 2:3528/1‑140 (MQ=255) gACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGCGGTCACTGTTGGTCAGCATTTCCAGTGGGTTCTGGGGGTGCTGGAAGCGCTCCAGACCACGCTCCTTGAGCGGGt > 1:291560/1‑236 (MQ=255) | CTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCATGGCCATGTTCGGCGATAAAGGCGTGGTCGAACACGGCCGGTTCGCCGTTGGCCTGGGCTTCGCGTTCCCATTGCAGGACGAACTTGGCCATGCCGCGCAGCATCGCCATGTCGCCACCCAGGGCCGGGCGGAAGAAGGCGGTGTTGGTCGGGCGGTCACTGTTGGTCAGCATTTCCAGTGGGTTCTGGGGGTGCTGGAAGCGCTCCAGACCACGCTCCTTGAGCGGGT > AE015451/311179‑311606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |