New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 2964062 | 41 (1.000) | 4 (0.100) | 4/320 | NT | 9.1% | coding (808/942 nt) | fatD | Ferric anguibactin transport system permease protein FatD |
? | AE015451 | = 2964083 | 41 (1.050) | coding (787/942 nt) | fatD | Ferric anguibactin transport system permease protein FatD |
AGCCCGCCCAGGCCGCCTGCAGTCAGGCCGATGGGCACTTCGAACGGGTAGATCAGCAACCGCCCGAGCAGGTCGCAGACCAGCAGCAAGGCCGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2963965‑2964062 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcaccCTGCCACTGGTGGCGCTGGGCGGTGCGGCCTTGCTGCTGGTCTGCGACCTGCTCGGGCGGTTGCTGATCTACCCGTTCGAAGTGCCCATCGGCCTGACTGCAGGCGGCCTGGGCGGGCTGATCTTCCTCGGGCTGATCATCTGGAGGCAGCGATGAAAGGCCGACACTGCTTGTGGCTGGCCGTGGTCGCTCTGGCC < AE015451/2964083‑2963887 AGCCCGCCCAGGCCGCCTGCAGTCAGGCCGATGGGCACTTCGAACGGGTAGATCAGCAACCGCCCGAGCAGGTCGCAGACCAGCAGCAAGGCCGCACCCTGCCACTGGCGGCGCTGGGCGGTGCGGCCTTGCTGCTGGTCTGCGACCTGCTCGGGCGGTTG > 1:188110/1‑161 ACGGGTAGATCAGCAACCGCCCGAGCAGGTCGCAGACCAGCAGCAAGGCCGCACCCTGCCACTGGTGGCG > 2:494520/1‑70 CCAGCAGCAAGGCCGCACCCTGCCACTGGTGGCGCTGGGCGGTGCGGCCTTGCTGCTGGTCTGCGACCTGCTCGGGCGGTTGCTGATCTACCCGTTCGAAGTGCCCATCGGCCTGACTGCAGGCGGCCTGGGCGGGCTGATCTTCCTCGGGCTGATCATCTGGAGGCAGCGATGAAAGGCCGACACTGCTTGTGGCTGGCCGTGGTCGCTCTGGCC < 1:384209/216‑1 CCAGCAGCAAGGCCGCACCCTGCCACTGGTGGCGCTGGGCGGTGCGGCCTTGCTGCTGGTCTGCGACCTGCTCGGGCGGTTGCTGATCTACCCGTTCGAAGTGCCCATCGGCCTGACTGCAGGCGGCCTGGGCGGGCTGATCTTCCTCGGGCTGATCATCTGGAGGCAGCGATGAAAGGCCGACACTGCTTGTGGCTGGCCGTGGTCGCTCTGGCC > 2:384208/1‑216 AGCCCGCCCAGGCCGCCTGCAGTCAGGCCGATGGGCACTTCGAACGGGTAGATCAGCAACCGCCCGAGCAGGTCGCAGACCAGCAGCAAGGCCGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2963965‑2964062 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcaccCTGCCACTGGTGGCGCTGGGCGGTGCGGCCTTGCTGCTGGTCTGCGACCTGCTCGGGCGGTTGCTGATCTACCCGTTCGAAGTGCCCATCGGCCTGACTGCAGGCGGCCTGGGCGGGCTGATCTTCCTCGGGCTGATCATCTGGAGGCAGCGATGAAAGGCCGACACTGCTTGTGGCTGGCCGTGGTCGCTCTGGCC < AE015451/2964083‑2963887 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |