| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 3209796 = | 40 (0.980) | 4 (0.100) | 4/314 | NT | 9.1% | intergenic (+57/+60) | PP_2813/PP_2814 | BNR domain protein/conserved protein of unknown function |
| ? | AE015451 | 3209843 = | 43 (1.130) | intergenic (+104/+13) | PP_2813/PP_2814 | BNR domain protein/conserved protein of unknown function | |||||
GCCTGAAGAAGCCTACCCGTTGATCGTGCCGCTCGAGCTGGTGCGCACGCTTTCTCCGCGGGTACAGAAGATCCTCGGTTTCCGCTCCCAATACCCCAATGGCAGCCCTGGCCTTTGGCAACATAACTACGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCACGACCACCCATTCGCCCAGGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3210015‑3209796‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccaggcaagTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAGGATCTTCTGTACCCGCGGAGAAAGCGTGCGCACCAGCTCGAGCGGCACGATCAACGGGTAGGCTTCTTCAGGCGTGATTATCGAAGCCTGCATCGGGATGGTCAGCCCGCGACGGTAATAGTCGGTGGTCACGT > AE015451/3209843‑3210076 GCCTGAAGAAGCCTACCCGTTGATCGTGCCGCTCGAGCTGGTGCGCACGCTTTCTCCGCGGGTACAGAAGATCCTCGGTTTCCGCTCCCAATACCCCAATGGCAGCCCTGGCCTTTGGCAACATAACTACGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCACGACCACCCATTCGCCCAGG < 1:196253/216‑1 CCAATGGCAGCCCTGGCCTTTGGCAACATAACTACGCAGACCTGGCGGATTACCTGCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCACGACCACCCATTCGC < 2:72230/116‑1 GCCTTTGGCAACATAACTACGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCACGACCACCCATTCGCCCAGGCAAGTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGT < 2:634474/149‑1 CTACGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCACGACCACCCATTCGCCCAGGCAAGTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGG < 1:483023/132‑1 CGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCACGACCACCCATTCGCCCAGGCAAGTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAGGATCTTCTGTACCCGCGGAGAAAGCGTGCGCACCAGCTCGAG > 2:391698/1‑233 CCCATTCGCCCAGGCAAGTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCTTTGGGGTATTGGGAGCGGAAACCGAGGATCTTCTGTACCCGCGGAGAAAGCGTGCGCACCAGCTCGAGCGGCACGATCAACGGG > 1:309631/1‑176 CCAGGCAAGTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTG < 1:650588/80‑1 CCAGGCAAGTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTG > 2:650587/1‑80 AAGTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTATGCGGAGTTATGTTGCCAAAGGCCAGGGCTGCGATTGGGGGATTGGGAGCGGAAACCGAGGATCTTCTGTACCCGCGGAGAAAGCGTGCGCA > 2:561167/1‑135 AGTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAGGATCTTCTGTACCCGCGGAGAAAGCGTGCGCACCAGCTCGAGCGGCACGATCAACGGGTAGGCTTCTTCAGGCGTGATTATCGAAGCCTGCATCGGGATGGTCAGCCCGCGACGGTAGTAGTCGGTGGTCACGT > 1:459977/1‑236 AGTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAGGATCTTCTGTACCCGCGGAGAAAGCGTGCGCACCAGCTCGAGCGGCACGATCAACGGGTAGGCTTCTTCAGGCGTGATTATCGAAGCCTGCATCGGGATGGTCAGCCCGCGACGGTAATAGTCGGTGGTCACGT < 1:657595/236‑1 GCCTGAAGAAGCCTACCCGTTGATCGTGCCGCTCGAGCTGGTGCGCACGCTTTCTCCGCGGGTACAGAAGATCCTCGGTTTCCGCTCCCAATACCCCAATGGCAGCCCTGGCCTTTGGCAACATAACTACGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCACGACCACCCATTCGCCCAGGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3210015‑3209796‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccaggcaagTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAGGATCTTCTGTACCCGCGGAGAAAGCGTGCGCACCAGCTCGAGCGGCACGATCAACGGGTAGGCTTCTTCAGGCGTGATTATCGAAGCCTGCATCGGGATGGTCAGCCCGCGACGGTAATAGTCGGTGGTCACGT > AE015451/3209843‑3210076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |