| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 5856275 | 38 (0.930) | 3 (0.080) | 3/318 | NT | 7.8% | coding (202/1392 nt) | PP_5133 | conserved membrane protein of unknown function |
| ? | AE015451 | = 5856285 | 35 (0.900) | coding (212/1392 nt) | PP_5133 | conserved membrane protein of unknown function | |||||
GTGTGGGTTATGCTTCTGCCTTGACCTGTGCAATGGAAGACCTTGTGACTGCACCCACGCCACTGGACAAGCGCTGGCTCACCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5856042‑5856275‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccctgcTTCCAATGGCGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTCGCGCAGGCGTACCGCTTCGGTGAGCCAGCGCTTGTCCAGTGGCGTGGGTGCAGTCACAAGGTCTTCCATTGCACAGGTCAAGGCAGAA < AE015451/5856285‑5856055 GTGTGGGTTATGCTTCTGCCTTGACCTGTGCAATGGAAGACCTTGTGACTGCACCCACGCCACTGGACAAGCGCTGGCTCACCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCT > 1:431837/1‑232GTGTGGGTTATGCTTCTGCCTTGACCTGTGCAATGGAAGACCTTGTGACTGCACCCACGCCACTGGACAAGCGCTGGCTCACCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCT < 2:431836/232‑1 CCACGCCCGCCAGCTCGGTGGCGACCTGGCCACGCGCATCGAAACACGTCCGCTCTTCCTGGCCGAGCTCGATGACATGACCGGCGCCCTGCTTCCACTGGCGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAG < 2:675963/136‑1 ACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGCCATGACCGGCGCCCTGCTTCCAATGGTGCAGGGCGCCGGTCATGTCATCGCGCCCGGCCAGGAACAGCGCAC > 2:637914/1‑116 GCGATGACATGACCGGCGCCCTGCTTCCAATGGCGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTCGCGCAGGCGTACCGCTTCGGTGAGCCAGCGCTTGTCCAGTGGCGTGGGTGCAGTCACAAGGTCTTC > 2:659374/1‑233 GCGCCCTGCTTCCAATGGCGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTCGCGCAGGCGTACCGCTTCGGTGAGCCAGCGCTTGTCCAGTGGCGTGGGTGCAGTCACAAGGTCTTCCATTGCACAGGTCAAGG < 1:5807/235‑1 CCCTGCTTCCAATGGCGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTCGCGCAGGCGTACCGCTTCGGTGAGCCAGCGCTTGTCCAGTGGCGTGGGTGCAGTCACAAGGTCTTCCATT < 1:706145/219‑1 CCTGCTTCCAATGGCGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTCGCGCAGGCGTACCGCTTCGGTGAGCCAGCGCTTGTCCAGTGGCGTGGGTGCAGTCACAAGGTCTTCCATTGCACAGGTCAAGGCAGAA > 1:427383/1‑236 GTGTGGGTTATGCTTCTGCCTTGACCTGTGCAATGGAAGACCTTGTGACTGCACCCACGCCACTGGACAAGCGCTGGCTCACCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5856042‑5856275‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccctgcTTCCAATGGCGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTCGCGCAGGCGTACCGCTTCGGTGAGCCAGCGCTTGTCCAGTGGCGTGGGTGCAGTCACAAGGTCTTCCATTGCACAGGTCAAGGCAGAA < AE015451/5856285‑5856055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |