New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 313870	47 (1.150)	4 (0.110)	4/296	NT	8.8%	intergenic (+43/+8)	ygaU/yrfG	regulator of murein cross‑linking/purine nucleotidase
	?	AE015451	= 313850	41 (1.140)					intergenic (+23/+28)	ygaU/yrfG	regulator of murein cross‑linking/purine nucleotidase

TGACCGGGCCGGTAGTCCAGGCGGCAAGGTTCGTCACAGTGAAATCGGGCGACACACTTTCAGCCATTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGTGCACTGCGCAGAATCGCCAGCGTGTCATCGATGAACAGGCTGCGTTCCGGTTCGAAGCCGATATCCGCCTGCAGGGCATCCCAAAACTGCGGGCTTTCCTT  >  AE015451/313643‑314099                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                      tGACCGGGCCGGTAGTCCAGGCGGCAAGGTTCGTCACAGTGAAATCGGGCGACACACTTTCAGCCATTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGcc                                                                                                                                                                                                                                <  1:610042/235‑1 (MQ=255)       ggCCGGTAGTCCAGGCGGCAAGGTTCGTCACAGTGAAATCGGGCGACACACTTTCAGCCATTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAgg                                                                                                                                                                                                                         <  1:506504/236‑1 (MQ=255)                           aGGTTCGTCACAGTGAAATCGGGCGACACACTTTCAGCCATTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAA                                                                                                                                                                                                                                       <  1:338461‑M1/202‑1 (MQ=255)                                     caGTGAAATCGGGCGACACACTTTCAGCAATTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAAga                                                                                                                                                                                                                                     <  1:726829‑M1/194‑3 (MQ=255)                                                                  aTTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGt                                                                                                                                                                                                      >  1:762976/1‑196 (MQ=255)                                                                      ccATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGcc                                                                                                                                                                                                                                <  1:443181/166‑1 (MQ=255)                                                                       cATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCCCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCt                                                                                                                                                          >  1:115892/1‑235 (MQ=255)                                                                       cATGGTAGTGTATGGCAATGCCAATCAGTACAACAAAATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAgg                                                                                                                                                                                                                         <  1:150302/172‑1 (MQ=255)                                                                                gtATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACcgccgc                                                                                                                                                                                      <  2:694057/198‑1 (MQ=255)                                                                                   tGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGt                                                                                                                                                                                                      >  2:270758/1‑179 (MQ=255)                                                                                         tGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCa                                                                                                                                                                                                                  >  1:635848/1‑161 (MQ=255)                                                                                         tGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGGAATc                                                                                                                                                                                                  >  2:665047/1‑177 (MQ=255)                                                                                            cactCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCggg                                                                                                                                                                                                      >  1:84972/4‑169 (MQ=255)                                                                                            cAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGCCTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGcc                                                                                                                                                                                                                       >  1:528492/1‑153 (MQ=255)                                                                                            cAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCAc                                                                                                                                      >  2:463089/1‑234 (MQ=255)                                                                                                 aGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCAACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAg                                                                                                                                >  1:443090/1‑235 (MQ=255)                                                                                                  gTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAAgaggcctgtacagacttcagcgatcagtcaggaatacgcagc                                                                                                                                                                                             >  1:747053‑M1/1‑131 (MQ=255)                                                                                                      aacaaGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGAGCGCGCCCGCGAAt                                                                                                                                                                                                                                      >  1:473596/1‑128 (MQ=255)                                                                                                               ttCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACAcc                                                                                                                 <  1:647438/236‑1 (MQ=255)                                                                                                                tCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAAt                                                                                                                                                                                                                                      >  1:475796/1‑118 (MQ=255)                                                                                                                tCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAAt                                                                                                                                                                                                                                      <  2:475795/118‑1 (MQ=255)                                                                                                                tCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTa                                                                                                                                                    >  2:518528/1‑200 (MQ=255)                                                                                                                tCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAg                                                                                                                            >  1:333817/1‑224 (MQ=255)                                                                                                                     gCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAAcc                                                                                                            <  1:463090/235‑1 (MQ=255)                                                                                                                        aacaaGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAAccgcc                                                                                                         >  1:387734/1‑235 (MQ=255)                                                                                                                                   gCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCaa                                                                                                                                                                                    <  1:270759/149‑1 (MQ=255)                                                                                                                                                gACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCACACTCTTCAGCATCCCGCGGcc                                                                                                                                                               >  2:194595/1‑157 (MQ=255)                                                                                                                                                 aCAAGATCTATCCGGGGCAGGTGCGGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCTTCTTCGCGGGCGCGCCCGCGAAgaggcctgtacagacttcagcgatca                                                                                                                                                                                                             >  2:408161‑M1/1‑84 (MQ=255)                                                                                                                                                   aaGATCGATCCGGGGCGGGTGCTGCGTATTCCTGACTGAGCGCTGAAGTCGGTACAGGCCTCTTCGCGGGCGCGCCCGCGAAgaggcctgtacagacttcagcgatcagtca                                                                                                                                                                                                         <  2:215526‑M1/112‑31 (MQ=255)                                                                                                                                                      aTCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACAcc                                                                                                                 <  2:295768/197‑1 (MQ=255)                                                                                                                                                          aTCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTc                                                                                                                                                                                                           <  1:289560/103‑1 (MQ=255)                                                                                                                                                              ggggCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCttg                                                                                                                                           >  2:365893/1‑161 (MQ=255)                                                                                                                                                                  cAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGTGCACTGCGCAGAATCGCCAg                                                                                   >  1:182678/1‑215 (MQ=255)                                                                                                                                                                   aGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGCCTGGCGCACCGCCAGCac                                                                                                                             >  2:124141/1‑171 (MQ=255)                                                                                                                                                                     gTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGTGCACTGCGCAGAATCGCCAGCGTGTCATCGATGAACAGGCTGCg                                                           <  1:56207/236‑1 (MQ=255)                                                                                                                                                                        ctgcGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGTGCACTGCGCAGAATCGCCAGCGTGTCATCGa                                                                        >  2:275711/1‑220 (MQ=255)                                                                                                                                                                             tATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGgcgc                                                                                                                                        >  2:243339/1‑151 (MQ=255)                                                                                                                                                                                   tgactgaTCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAAgaggcctgtacagacttcagcgatcagtcaggaatacgcagcacctgccccggatagatcttgtccgggtgtttgagcatcgg                                                                                                                                                    >  2:747052‑M1/1‑50 (MQ=255)                                                                                                                                                                                     actgaTCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGTGCACTGCGCAGAATCGCCAGCGTGTCATCGCTGAACAGGCGGCGTTCCGGTTCGAAGCCg                                           >  1:196660/1‑236 (MQ=255)                                                                                                                                                                                     actgaTCGCTGAAGTCTGTACAGGCATCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACAcc                                                                                                                 <  2:749061/166‑1 (MQ=255)                                                                                                                                                                                        gaTCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCt                                                                                                                                                                                                                               <  1:118172/53‑1 (MQ=255)                                                                                                                                                                                        gaTCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCt                                                                                                                                                                                                                               >  2:118172/1‑53 (MQ=255)                                                                                                                                                                                            gCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAAcc                                                                                                            <  1:276642/164‑1 (MQ=255)                                                                                                                                                                                            gCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAAcc                                                                                                            >  2:276641/1‑164 (MQ=255)                                                                                                                                                                                             cTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCCAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGCCTGGCGCACCGCCAGCACGTGCCCCACCCCAAAccg                                                                                                           >  2:583375/1‑164 (MQ=255)                                                                                                                                                                                              tGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCaa                                                                                                                                                                                    >  1:494405/1‑90 (MQ=255)                                                                                                                                                                                              tGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCaa                                                                                                                                                                                    <  2:494404/90‑1 (MQ=255)                                                                                                                                                                                              tGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGTGCACTGCGCAGAATCGCCAGCg                                                                                 <  2:660999/189‑1 (MQ=255)                                                                                                                                                                                                          aGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACAcc                                                                                                                 >  1:645463/1‑145 (MQ=255)                                                                                                                                                                                                          aGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACAcc                                                                                                                 <  2:645462/145‑1 (MQ=255)                                                                                                                                                                                                               tctTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACcgccgc                                                                                                                                                                                      <  1:633486/71‑1 (MQ=255)                                                                                                                                                                                                               tctTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACcgccgc                                                                                                                                                                                      >  2:633485/1‑71 (MQ=255)                                                                                                                                                                                                               tctTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGTGCACTGCGCAGAATCGCCAGCg                                                                                 >  1:542353/1‑172 (MQ=255)                                                                                                                                                                                                               tctTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGTGCACTGCGCAGAATCGCCAGCGTGTCATCGATGAACAGGCTGCGTTCCGGTTCGAAGCCGATATCCGCCTGCAGGGCATCCCaaa                  >  1:436414/1‑235 (MQ=255)                                                                                                                                                                                                                     cgGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGTGCACTGCGCAGAATCGCCAGCGTGTCATCGATGAACAGGCTGCGTTCCGGTTCGAAGCCGATATCCGCCTGCAGGGCATCCCAAAACTg              <  2:330518/233‑1 (MQ=255)                                                                                                                                                                                                                       ggCGCGCCCGCGAAgaggcctgtacagacttcagcgatcagtcaggaatacgcagcacctgccccggatagatcttgtccgggtgtttgagcatcggcttgttggcctcgaaaatcttgttgtactgattggcattgccatacacgaccatggcaatggctgaaagtgtgtcgcccgatttcactgtgacgaaccttgccgcctggactac                                  <  1:436569‑M1/211‑198 (MQ=255)                                                                                                                                                                                                                            gcCCCCGAATGGGGCCTTACAGCCCTACCAGTAACTCCCGGTAATCCGCGAccgc                                                                                                                                                                                         <  1:235865/55‑1 (MQ=255)                                                                                                                                                                                                                                gcgAAgaggcctgtacagacttcagcgatcagtcaggaatacgcagcacctgccccggatagatcttgtccgggtgtttgagcatcggcttgttggcctcgaaaatcttgttgtactgattggcattgccatacacgaccatggcaatggctgaaagtgtgtcgcccgatttcactgtgacgaaccttgccgcctggactaccggcccggtcacggtgatctggtcctcgacac  >  1:662859‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                      TGACCGGGCCGGTAGTCCAGGCGGCAAGGTTCGTCACAGTGAAATCGGGCGACACACTTTCAGCCATTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTCTTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGTGCACTGCGCAGAATCGCCAGCGTGTCATCGATGAACAGGCTGCGTTCCGGTTCGAAGCCGATATCCGCCTGCAGGGCATCCCAAAACTGCGGGCTTTCCTT  >  AE015451/313643‑314099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.