Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC | AE015451 | 1,531,732 | Δ107 bp | 32.7% | coding (38‑144/630 nt) | PP_1344 ← | conserved protein of unknown function |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 1531731 | 5 (0.120) | 7 (0.180) | 7/322 | NT | 32.7% | coding (145/630 nt) | PP_1344 | conserved protein of unknown function |
? | AE015451 | 1531839 = | 24 (0.610) | coding (37/630 nt) | PP_1344 | conserved protein of unknown function |
CACATGGCAGTGCTCGCGGGCAGCCGGTTGCAACTGGCTTTCCAGCAGGCGCTGCAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCAC > AE015451/1531546‑1531963 | cacaTGGCGGTGCTCGCGGGCAGCCGGTTGCAACTGGCTTTCCAGCAGGCGCTGCAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgttgccaagcctt < 1:161293‑M1/236‑51 (MQ=255) gcagcagGCGCAGCGGGCGCACCTGGCTCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgttgccaagccttgaactcagtgaaaatg < 2:168842‑M1/169‑67 (MQ=255) cTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgtt < 2:484455‑M1/121‑41 (MQ=255) ggggCTGGGCGGGGGGGGGTTTGTAGGCCGTGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATg < 1:657195/232‑1 (MQ=255) ccATGGGGGTACGCGTGAAGTGACGTGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgttgccaagccttgaactcagtgaaaatgcccctatctaaaacaggcccctgccaaaacgctgtatcagcatcgtggaaatccaccactttcctcaccatcgtttccgggtagaatgctcgttcgcatgcggcctatgggctgcacgggcgactcatggggccgc < 1:104342‑M1/236‑203 (MQ=255) gggggTACGCGTGAAGTGACGTGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgttgccaagccttgaactcagtgaaaatgcccctatctaaaacaggcccctgccaaaacgctgtatcagcatcgtggaaatccaccactttcctcaccatcgtttccgggtagaatgctcgttcgcatgaggcct > 2:327185‑M1/1‑30 (MQ=255) ggggTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGc < 1:427803/108‑1 (MQ=255) ggggTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGc > 2:427802/1‑108 (MQ=255) gggTACGCGTGAAGTGACGTGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgttgccaagccttgaactcagtgaaaatgcccctatctaaaacaggcccctgccaaaacgctgtatcagcatcgtggaaatccaccactttcctcaccatcgtttccgggtagaatgctcgttcgcatgcggcctatgggctgcacgggcgactcatggggccgccctcc > 1:755986‑M1/1‑28 (MQ=255) cgTGAAGTGACGTGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgttgccaagccttgaactcagtgaaaatgcccctatctaaaacaggcccctgccaaaacgctgtatcagcatcgtggaaatccaccactttcctcaccatcgtttccgggtagaatgctcgttcgcatgcggcctatgggctgcacgggcgactcatggggccgccctccatccctaa > 1:159303‑M1/1‑21 (MQ=255) tGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTCCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGtt > 1:39893/1‑161 (MQ=255) tGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTCCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGtt < 2:39893/161‑1 (MQ=255) tGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgttgccaagccttgaactcagtgaaaatgcccctatctaaaacaggcccctgccaaaacgctgtatcagcatcgtggaaatccaccactttcctccccatcgtttccgggtagaatgctcgttcgcatgcggcctatgggctgcacgggcgactcatggggccgccctccctccctaagtgtgga > 1:38897‑M1/1‑9 (MQ=255) aggTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCcaccac < 1:442036/233‑1 (MQ=255) | CACATGGCAGTGCTCGCGGGCAGCCGGTTGCAACTGGCTTTCCAGCAGGCGCTGCAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCAC > AE015451/1531546‑1531963 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |