New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 2689525 =36 (0.880)3 (0.080) 3/316 NT 9.0% coding (955/2268 nt) PP_2356 putative Phytochrome family protein
?AE015451 2689657 = 27 (0.700)coding (823/2268 nt) PP_2356 putative Phytochrome family protein

TCACCTGGGCTTCAGGCGGGGTCTGGCCGATCAGGTCACAGCGCTCGGCCGAGATCACTGCCGCGCCCTGCGCGTCGGCGAAGGCCAGCAGCACTTCAGGCAGGTCGCGCAGGCCGTCACTTACGCTGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTGCGCATGTACTGCAGGTGCACGGGCGATACGCTACGCAGCGCAGCAAAACTCATGTCCAGCGGCTTGCCGGTGCGCGGGTTGGTAGCGGG  >  AE015451/2689294‑2689753
                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                    
tCACCTGGGCTTCAGGCGGGGTCTGGCCGATCAGGTCACAGCGCTCGGCCGAGATCACTGCCGCGCCCTGCGCGTCGGCGAAGGCCAGCAGCACTTCAGGCAGGTCGCGCAGGCCGTCACTTACGCTGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACg                                                                                                                                                                                                                                  >  1:287488/1‑236 (MQ=255)
                                               gCCGAGATCCCTGCCGCGCCCTGCGCGTCGGCGAAGGCCAGCAGCACTTCAGGCAGGTCGCGCAGGCCGTCACTTACGCTGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCg                                                                                                                                                                                   <  1:164941/236‑1 (MQ=255)
                                                            aggcgcgcgagctgtaccgggtcacccgtatccgcgtgatcgaagatgccaactatcagccctcgccactgctgcccgctaccaacccgcgcaccggcaagccgctggacatgagttttgctgcgctgcgtagcgtatcgcccgtgcacctgcagtacatgcgcaacatggGCAc                                                                                                                                                                                                                                   >  2:144679‑M1/172‑175 (MQ=255)
                                                             cgcgCCCTGCGCGTCGGCGAAGGCCAGCAGCACTTCAGGCAGGTCGCGCAGGCCGTCACTTACGCTGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACCGCTCGCAgg                                                                                                                                                                                                               >  2:164940/1‑194 (MQ=255)
                                                             cgcgCCCTGCGCGTCGGCGAAGGCCAGCAGCACTTCAGGCAGGTCGCGCAGGCCGTCACTTACGCTGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGAtggt                                                                                                                                                                     >  1:181682/1‑236 (MQ=255)
                                                                 cgcgagctgtaccgggtcaaccgtatccgcgtgatcgaagatgccaactatcagccctcgccactgctgcccgctaccaacccgcgcaccggcaagccgctggacatgagttttgctgcgcggcgtagcgtatcgcccgtgcacctgcagtacatgcgcaacatggGCACGCt                                                                                                                                                                                                                                >  2:47717‑M1/167‑173 (MQ=255)
                                                                        tgtaccgggtcaaccgtatccgcgtgatcgaagatgccaactatcagccctcgccactgctgcccgctaccaacccgcgcaccggcaagccgctggacatgagttttgctgcgctgcgtagcgtatcgcccgtgcacctgcagtacatgcgcaacatggGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGAt                                                                                                                                                                        >  1:570508‑M1/160‑222 (MQ=255)
                                                                        cgTCGGCGAAGGCCAGCAGCACTTCAGGCAGGTCGCGCAGGCCGTCACTTACGCTGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGaaa                                                                                                                                                            <  1:633013/234‑1 (MQ=255)
                                                                         gTCGGCGAAGGCCAGCAGCACTTCAGGCAGGTCGCGCAGGCCGTCACTTACGCTGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTgcgg                                                                                                                                                                                                 >  1:547287/1‑195 (MQ=255)
                                                                            ggCGAAGGCCAGCAGCACTTCAGGCAGGTCGCGCAGGCCGTCACTTACGCTGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTg                                                                                                                                                                                                          <  1:59731/184‑1 (MQ=255)
                                                                                 aGGCCAGCAGCACTTCAGGCAGGTCGCGCAGGCCGTCACTTACGCTGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCca                                                                                                                                                  >  1:87807/1‑235 (MQ=255)
                                                                                   gCCAGCAGCCCTTCAGGCAGGTCGCGCAGTCCGTCCCTTACGCGGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTg                                                                                                                                                                                                    <  2:99171/183‑1 (MQ=255)
                                                                                                   gcaggTCGCGCAGGCCGTCACTTACGCTGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACg                                                                                                                               <  1:676331/236‑1 (MQ=255)
                                                                                                          gcgcAGGCCGTCACTTACGCTGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCt                                                                                                                                                                              >  1:591108/1‑182 (MQ=255)
                                                                                                           cgcAGGCCGTCACTTACGCTGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAg                                                                                                                       >  1:502037/1‑236 (MQ=255)
                                                                                                            ccaactatcagccctcgccactgctgcccgctaccaacccgcgcaccggcaagccgctggacatgagttttgctgcgctgcgtagcgtatcgcccgtgcacctgcagtacatgcgcaacatggGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGaaa                                                                                                                                                            >  2:259142‑M1/124‑198 (MQ=255)
                                                                                                                   ggcACTTACGCTGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTGGCGCGTACTGGCATGGGACTCGGGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGt                                                                                                                                                                            <  2:655064/173‑1 (MQ=255)
                                                                                                                            gccgTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCcac                                                                                                                                                 <  1:142082/190‑1 (MQ=255)
                                                                                                                              tGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCg                                                                                                      >  2:528152/1‑234 (MQ=255)
                                                                                                                                   tGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCgg                                                                                                                                                                                                       >  2:747795/1‑132 (MQ=255)
                                                                                                                                   tGGTCGGCCATGGACGAGATCATGCGTACGATGCGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCa                                                                                                >  1:338998/1‑235 (MQ=255)
                                                                                                                                        ggCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGt                                                                                             >  2:495365/1‑233 (MQ=255)
                                                                                                                                        ggCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTg                                                                                           <  1:383508/235‑1 (MQ=255)
                                                                                                                                                  gagaTCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTTCGGGTGCGCAGGTCCACCCGGCGTGGCTGTTGATGGTGGCAg                                                                                                                                                                >  2:25198/1‑156 (MQ=255)
                                                                                                                                                    taTCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCAcc                                                                                                                                                                                        <  2:70633/129‑1 (MQ=255)
                                                                                                                                                      gcaccggcaagccgctggacatgagttttgctgcgctgcgtagcgtatcgcccgtgcacctgcagtacatgcgcaacatggGCAc                                                                                                                                                                                                                                   >  2:508039‑M1/82‑85 (MQ=255)
                                                                                                                                                       cATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAg                                                                                                                                                        >  2:411523/1‑159 (MQ=255)
                                                                                                                                                       cATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTGCGCATGTACTGCAGGt                                                                           >  1:340003/1‑236 (MQ=255)
                                                                                                                                                            gTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTGCGCATGTACTGCAGGTGCACg                                                                      >  1:648549/1‑236 (MQ=255)
                                                                                                                                                              aCGATGCGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTGCGCATGTACTGCAGGTg                                                                          <  2:338997/230‑1 (MQ=255)
                                                                                                                                                                  tgtgCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTGCGCATGTACTGCAGGTGCACGGGCGAt                                                                >  1:762916/1‑236 (MQ=255)
                                                                                                                                                                       tGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTGCGCATGTACTGCAGGTGCACGGGCGAtacgct                                                           >  1:755969/1‑236 (MQ=255)
                                                                                                                                                                         gcgcAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTGCGCATGTACTGCAGGTGCACGGGCGAtacgct                                                           <  2:762915/234‑1 (MQ=255)
                                                                                                                                                                             aGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCcaca                                                                                                                                                >  1:89172/1‑145 (MQ=255)
                                                                                                                                                                                 tCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTGCGCATGTACTGCAGGTGCACGGGCGATACGCTAcgcagcg                                                   >  1:746796/1‑234 (MQ=255)
                                                                                                                                                                                   aaCAGCGTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTGCGCATGTACTGCAGGTGCACGGGCGATACGCTAcgcagcgcag                                                <  1:236422/235‑1 (MQ=255)
                                                                                                                                                                                              cgaaCTGGCCTGGGACTCGCGGGACTCTATCTGCAGCGACACCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCg                                                                                                                                                                                   <  2:413822/90‑1 (MQ=255)
                                                                                                                                                                                                      cgtGGGACTCGCGGGACTCTAGCTGCAGCGACAGCACGCGGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGc                                                                                                           <  2:79199/155‑1 (MQ=255)
                                                                                                                                                                                                              cacctgcagtacatgcgcaacatggGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAAGCACGATCGACAGCGACATCGAAGCCa                                                                                                         <  1:441101‑M1/126‑1 (MQ=255)
                                                                                                                                                                                                                gcgGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTGCGCATGTACTGCAgg                                                                            >  2:255723/1‑178 (MQ=255)
                                                                                                                                                                                                                  gggACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTGCGCATGTACTGCAGGTGCACGGGCGATACGCTACGCAGCGCAGCAAAACTCATGTCCAGCGGCTTGCCGGTgcgc                >  1:423980/1‑236 (MQ=255)
                                                                                                                                                                                                                             tGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAg                                                                                                                       >  2:560410/1‑122 (MQ=255)
                                                                                                                                                                                                                                 gCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTGCGCATGTACTGCAGGTGCACGGGCGATACGCTACGCAGCGCAGCAAACCTCATGTCCAGCGGCTTGCCGGTGCGCGGGTTGGCCGCggg  >  2:248627/1‑235 (MQ=255)
                                                                                                                                                                                                                                       GCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCg                                                                                                      <  2:754708‑M1/129‑1 (MQ=255)
                                                                                                                                                                                                                                       GCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTGCGCATGTACTGCAGGTGCCCGGGCGAtacgct                                                           <  2:659769‑M1/172‑1 (MQ=255)
                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                    
TCACCTGGGCTTCAGGCGGGGTCTGGCCGATCAGGTCACAGCGCTCGGCCGAGATCACTGCCGCGCCCTGCGCGTCGGCGAAGGCCAGCAGCACTTCAGGCAGGTCGCGCAGGCCGTCACTTACGCTGTCGTGGTCGGCCATGGACGAGATCATGCGTACGATGTGCTGGCGCAGCGTCAACAGCTTGCGCGTACTGGCATGGGACTCGCGGGACTCTATCTGCAGCGACAGCACGCTGGCCAACAGCTCGCAGGCCGTGCGGGTGCGCAGGTCCACCGGGCGTGGCTGTTGATGGTGGCAGGAAATCAGCCCCCACAGCTGGCCGTCAACCACGATCGACAGCGACATCGAAGCCAGCGTGCCCATGTTGCGCATGTACTGCAGGTGCACGGGCGATACGCTACGCAGCGCAGCAAAACTCATGTCCAGCGGCTTGCCGGTGCGCGGGTTGGTAGCGGG  >  AE015451/2689294‑2689753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.