New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 6002217	40 (0.980)	3 (0.070)	3/330	NT	6.8%	coding (84/1299 nt)	amaA	L‑pipecolate oxidase
	?	AE015451	= 6002230	43 (1.070)					coding (71/1299 nt)	amaA	L‑pipecolate oxidase

CGGCTACCCTGCTTCTGGCCAAGGGTGGCCTCGACGTCGTCGGGGCGGATCCACGTGCCGGCGTTGACCAGGCCGACGTTGCGCCCGGAGCCACCGTGGCCGATCTTCCAGGCCTCCAGCACGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCA  >  AE015451/6002002‑6002448                                                                                                                                                                                                                        |                                                                                                                                                                                                                                        cggcTACCCTGCTTCTGGCCAAGGGTGGCCTCGACGTCGTCGGGGCGGATCCACGTGCCGGCGTTGACCAGGCCGACGTTGCGCCCGGAGCCACCGTGGCCGATCTTCCAGGCCTCCAGCACGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGAc                                                                                                                                                                                                                     <  1:294203/236‑1 (MQ=255)          ggCTTCTGGCCAAGGGTGGCCTCGACGTCGTCGGGGCGGATCCACGTGCCGGCGTTGACCAGGCCGACGTTGCGCCCGGAGCCACCGTGGCCGATCTTCCAGGCCTCCAGCACGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAg                                                                                                                                                                                                                                    <  2:344450/211‑1 (MQ=255)                    cAAGGGTGGCCTCGACGTCGTCGGGGCGGATCCACGTGCCGGCGTTGACCAGGCCGACGTTGCGCCCGGAGCCACCGTGGCCGATCTTCCAGGCCTCCAGCACGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACgt                                                                                                                                                                                                    <  1:48528/234‑1 (MQ=255)                    cAAGGGTGGCCTCGACGTCGTCGGGGCGGATCCACGTGCCGGCGTTGACCAGGCCGACGTTGCGCCCGGAGCCACCGTGGCCGATCTTCCAGGCCTCCAGCACGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACg                                                                                                                                                                                                     >  2:297065/1‑233 (MQ=255)                         gTGGCCTCGACGTCGTCGGGGCGGATCCACGTGCCGGCGTTGACCAGGCCGACGTTGCGCCCGGAGCCACCGTGGCCGATCTTCCAGGCCTCCAGCACGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCca                                                                                                                                                                                             >  1:647417/1‑236 (MQ=255)                               tCGACGTCGTCGGGGCGGATCCACGTGCCGGCGTTGACCAGGCCGACGTTGCGCCCGGAGCCACCGTGGCCGATCTTCCAGGCCTCCAGCACGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACaa                                                                                                                                                                                          >  2:321753/1‑233 (MQ=255)                                     tcgtcgGGGCGGATCCACGTGCCGGCGTTGACCAGGCCGACGTTGCGCCCGGAGCCACCGTGGCCGATCTTCCAGGCCTCCAGCACCATCGTCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCAttgttg                                                                                                                                                                                 <  1:402630/236‑1 (MQ=255)                                       gtcgGGGCGGATCCACGTGCCGGCCTTGACCAGGCCGCCGTTGCGCCCGGCGCCCCCGTGGCCGATCTTCCAGGCCTCCAGCACGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCAttgt                                                                                                                                                                                   <  1:13803/232‑1 (MQ=255)                                                             gCGTTGCCCAGGCCGACGTTGCGCCCGGAGCCACCGTGGCCGATCTTCCAGGCCTCCAGCACGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAg                                                                                                                                                                                                                                    <  1:183518/161‑1 (MQ=255)                                                                                           ccACCGTGGCCGATCTTCCAGGCCTCCAGCACGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAg                                                                                                                             <  1:321754/234‑1 (MQ=255)                                                                                                 tGGCCGATCTTCCAGGCCTCCAGCACGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGcggtgagcacaaggccgatgtctgtgtgatcggc                                                                                                                                                                                          >  1:164014‑M2/1‑133 (MQ=255)                                                                                                    ccGATCGTCCAGGCCTCCAGCCCGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCcaca                                                                                                                                                                                           <  2:298421/163‑1 (MQ=255)                                                                                                           gccaGGCCTCCAGCACGATCACCGACCTGCGCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGcggtgagcacaaggccgatgtctgtgtgatcggcggcggtattaccggcctgt                                                                                                                                                                       >  1:403235‑M2/2‑123 (MQ=255)                                                                                                              aGGCCTCCAGCCCGATCACCGCCTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGt                                                                                                           <  1:87187/233‑1 (MQ=255)                                                                                                                  cTCCAGCACGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAAccc                                                                                                     <  1:487973/235‑1 (MQ=255)                                                                                                                        cACGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTa                                                                                              >  1:402357/1‑236 (MQ=255)                                                                                                                          cGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTaaa                                                                                                        <  1:45593/224‑1 (MQ=255)                                                                                                                             tCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGt                                                                                                           <  2:750886/218‑1 (MQ=255)                                                                                                                               aCCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAgggtt                                                                                       <  1:401248/236‑3 (MQ=255)                                                                                                                               aCCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACAGCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCAGCCCTTTCGCCGGTAAACCTGCTCCTACAgga                                                                                         >  2:724426/1‑233 (MQ=255)                                                                                                                                       gCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGgtgt                                                                                 <  1:312221/234‑1 (MQ=255)                                                                                                                                          cTGTTCGAGCAGGTGGATGGCCGCCGCCAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCAttgttg                                                                                                                                                                                 <  1:136758/135‑1 (MQ=255)                                                                                                                                          cTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACACGCATTGTTGCCGCAg                                                                                                                                                                           >  2:115217/1‑141 (MQ=255)                                                                                                                                          cTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAAttt                                                                                                                                                <  2:51658/168‑1 (MQ=255)                                                                                                                                          cTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAAttt                                                                                                                                                >  1:51658/1‑168 (MQ=255)                                                                                                                                             ttCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTgg                                                                          <  1:297066/235‑1 (MQ=255)                                                                                                                                                              ccgccgACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGCCGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACCTGGCCGGCTCCAGCaa                                                                                                                                                   >  2:746411/1‑145 (MQ=255)                                                                                                                                                               cgccgACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATg                                                                                                                                                                 >  2:460871/1‑130 (MQ=255)                                                                                                                                                               cgccgACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATg                                                                                                                                                                 <  1:460872/130‑1 (MQ=255)                                                                                                                                                                    aCAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGcccaggccctggccggtgagcacaaggccgatgtctgtgtgatcggcggcggtattaccggcctgtcggcggccatccacctgctcgaacagcgcaggtcggtgatcgtgctggaggcctggc                                                                                                              >  1:403235‑M1/1‑53 (MQ=255)                                                                                                                                                                                tACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGAc                                                                        <  2:296695/202‑1 (MQ=255)                                                                                                                                                                                 aCCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTAc                                                 <  2:317977/224‑1 (MQ=255)                                                                                                                                                                                      cgccgATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGa                                                           >  1:753043/1‑209 (MQ=255)                                                                                                                                                                                       gccgATCACACAGACATCGGCCTTGTGCTCACCGcccaggccctggccggtgagcacaaggccgatgtctgtgtgatcggcggcggtattaccggcctgtcggcggccatccacctgctcgaacagggcaagtcggtgatcgtgctggaggcctggaagatcggcca                                                                                                    >  1:164014‑M1/1‑34 (MQ=255)                                                                                                                                                                                        ccgATCACACAGACATCGGCCTTGTGCTCACCGcccaggccctggccggtgagcacaaggccgat                                                                                                                                                                                                         >  2:319635‑M1/1‑33 (MQ=255)                                                                                                                                                                                          gATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTgg                                                                          >  2:491859/1‑190 (MQ=255)                                                                                                                                                                                          gATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTgg                                                                          <  1:491860/190‑1 (MQ=255)                                                                                                                                                                                             cacacaGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCAACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCggg                                     <  2:647416/224‑1 (MQ=255)                                                                                                                                                                                                   gACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAgg                                                            <  1:386911/195‑1 (MQ=255)                                                                                                                                                                                                    aCATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGAc                                                                        <  2:753042/182‑1 (MQ=255)                                                                                                                                                                                                      aTCGGCCTTGTGCTCACCGGCCAGGGCCTGGGcggtgagcacaaggccgatgtctgtgtgatcgg                                                                                                                                                                                           >  2:319635‑M2/1‑32 (MQ=255)                                                                                                                                                                                                      aTCGGCCTGGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGAc                                                                                                                                                                                                      <  2:25837/54‑1 (MQ=255)                                                                                                                                                                                                       tCGGCCTTGTGCTCACCGGCCAGGGCCTGGCCGGCGACGGTCGTTTTCCTGACgt                                                                                                                                                                                                    <  2:210602/55‑1 (MQ=255)                                                                                                                                                                                                             ttGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCggg                                     >  1:306344/1‑208 (MQ=255)                                                                                                                                                                                                                tgCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATg                  <  2:306343/224‑1 (MQ=255)                                                                                                                                                                                                                 gCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATa       >  1:288119/1‑234 (MQ=255)                                                                                                                                                                                                                   tCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATgcagc              >  2:640288/1‑225 (MQ=255)                                                                                                                                                                                                                   tCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATgcagc              <  1:640289/225‑1 (MQ=255)                                                                                                                                                                                                                      ccGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCa  <  2:323627/234‑1 (MQ=255)                                                                                                                                                                                                                       cGGCCAGGGCCTGGGCAGCGACGGTCGGTTTGCTGGCGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGAc                                                                        <  1:157742/163‑1 (MQ=255)                                                                                                                                                                                                                        |                                                                                                                                                                                                                                        CGGCTACCCTGCTTCTGGCCAAGGGTGGCCTCGACGTCGTCGGGGCGGATCCACGTGCCGGCGTTGACCAGGCCGACGTTGCGCCCGGAGCCACCGTGGCCGATCTTCCAGGCCTCCAGCACGATCACCGACTTGCCCTGTTCGAGCAGGTGGATGGCCGCCGACAGGCCGGTAATACCGCCGCCGATCACACAGACATCGGCCTTGTGCTCACCGGCCAGGGCCTGGGCGGCGACGGTCGGTTTGCTGACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCA  >  AE015451/6002002‑6002448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.