Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC	AE015451	2,071,180	37 bp→CACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGC	14.4%	intergenic (+132/+59)	PP_1846 → / ← PP_1847	Group II intron‑encoding maturase/putative TonB‑dependent ferric siderophore receptor

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2071179	34 (0.830)	5 (0.160) +CACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGC	3/262	NT	14.4%	intergenic (+131/+96)	PP_1846/PP_1847	Group II intron‑encoding maturase/putative TonB‑dependent ferric siderophore receptor
	?	AE015451	2071217 =	42 (1.030)					intergenic (+169/+58)	PP_1846/PP_1847	Group II intron‑encoding maturase/putative TonB‑dependent ferric siderophore receptor

GCTGGTCTCGATACTGGATACGATTAACCGGCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATCGCGCCAGTAACGCTTGTCCAGCACGTTATCCACCGTCAGCCGCAGCACCGTGTCATACCCGGCAACACGGGTACTGTAGCGGCTGCCAAG  >  AE015451/2071000‑2071448                                                                                                                                                                                                                          |                                                                                                                                                                                                                                        gCTGGTCTCGATACTGGATACGATTAACCGGCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTc                                                                                                                                                                                                                       <  1:730551/236‑1 (MQ=255)              cTGGATACGATTAACCGGCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGa                                                                                                                                                                                                          >  1:496314/1‑236 (MQ=255)                                               tGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTcg                                                                                                                                                                                                             <  1:193713/200‑1 (MQ=255)                                                         tgtACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaa                                                                                                                                                                >  1:473921/1‑235 (MQ=255)                                                             cGGAACCGGACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAACCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCg                                                                                                                                                                                     <  1:75051/210‑1 (MQ=255)                                                                        gCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTcg                                                                                                                                                                                                             >  1:419437/1‑175 (MQ=255)                                                                        gCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTcg                                                                                                                                                                                                             <  2:419436/175‑1 (MQ=255)                                                                         gacccttacgcacggtggtgtgagaggacggcgggtgtgaacccgcctcctactcgattttcagggccattggggctgctgtgcagcccatcgcgacacaagcgggcttgcccgcgaagcccgtgccatccaccacggtgttggcTTCGCGGGc                                                                                                                                                                                                                                 <  2:182086‑M2/9‑1 (MQ=255)                                                                                         gACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTcgcg                                                                                                                                                                                                           <  2:277581/160‑1 (MQ=255)                                                                                         gACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTgg                                                                                                                               <  1:641457/236‑1 (MQ=255)                                                                                              cggGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGAGGGCACGGGCTTCGCCCGGGTTCGCGGGCAAGcc                                                                                                                                                                                                                            >  1:176950/1‑138 (MQ=255)                                                                                                  tgtgAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACCCAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCt                                                                                                                                 <  1:503228/225‑1 (MQ=255)                                                                                                          cGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGa                                                                                                                                                                     <  2:473920/181‑1 (MQ=255)                                                                                                           gCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATccccc                                                                                                             <  1:326379/236‑1 (MQ=255)                                                                                                                               ggCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAg                                                                                                                      <  1:170011/207‑1 (MQ=255)                                                                                                                               ggCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACAt                                                                                             <  1:279599/232‑1 (MQ=255)                                                                                                                                gccattggggctgctgtgcagcccatcgcgacacaagcgggcttgcccgcgaacacgggcgaagcccgtgccatccaccacggtgttggcTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGt                                                                                                                     >  1:518314‑M2/91‑207 (MQ=255)                                                                                                                                gccattggggctgctgtgcagcccatcgcgacacaagcgggcttgcccgcgaacacgggcgaagcccgtgccatccaccacggtgttggcTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGt                                                                                                                     <  2:518313‑M2/117‑1 (MQ=255)                                                                                                                                     tGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGc                                                                                                                                                  <  1:577459/173‑1 (MQ=255)                                                                                                                                     tGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATccc                                                                                                               <  2:501125/208‑1 (MQ=255)                                                                                                                                               gtgCAGCCCATCGCGACTCAACCGCGCTTGCCCGCGAAGCCAACACCGTGGCGGATGGCACGAGCTTCGCCCGGGTTCGCCGGCAAGCCCGccg                                                                                                                                                                                                                       >  2:148302/1‑92 (MQ=17)                                                                                                                                                tgCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGccc                                                                                                                                                                                                                           >  1:30162/1‑89 (MQ=255)                                                                                                                                                     cccATCGCGACCCAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATcc                                                                                                                <  1:144530/191‑1 (MQ=255)                                                                                                                                                      ccATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAg                                                                                                           <  1:317318/195‑1 (MQ=255)                                                                                                                                                            cgACACAAGCGGGCTTGCCCGCAAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCca                                                                                                <  1:662822/200‑1 (MQ=255)                                                                                                                                                              acacAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaagcc                                                                                                                                                      <  1:366909/144‑1 (MQ=255)                                                                                                                                                              acacAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATc                                                                                            <  1:325445/202‑1 (MQ=255)                                                                                                                                                                acaAGCGTGCTGGCCCGCGAAGCCAACCCCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaagccg                                                                                                                                                     <  2:173172/143‑1 (MQ=255)                                                                                                                                                                acaAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTa                                                                                                                       <  1:686029/173‑1 (MQ=255)                                                                                                                                                                  aaGCGGGCTTGCCCGCAAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTAAGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAggcc                                                                                                        >  2:662821/1‑184 (MQ=255)                                                                                                                                                                     cGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCGCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATCGCGCCAGTAACGCTTGTCCAGCACGTTATCCAcc                                                          <  1:129621/229‑1 (MQ=255)                                                                                                                                                                      gggcttgcccgcgaacacgggcgaagcccgtgccatccaccacggtgttggcTTCGCGGGCaa                                                                                                                                                                                                                               >  1:424252‑M2/53‑63 (MQ=255)                                                                                                                                                                      gggcttgcccgcgaacacgggcgaagcccgtgccatccaccacggtgttggcTTCGCGGGCaa                                                                                                                                                                                                                               <  2:424251‑M2/11‑1 (MQ=255)                                                                                                                                                                               cgcgAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATcccc                                                                                                  >  2:624602/1‑179 (MQ=255)                                                                                                                                                                                   aaGCCAACACCGTGGGGGATGGCACGGGCTGCGCCCGGGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGcccc                                                                                                                                                                                      <  2:54018/91‑1 (MQ=255)                                                                                                                                                                                    aGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGc                                                                                                                                      <  2:278260/138‑1 (MQ=255)                                                                                                                                                                                          cacCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCTGCACCCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATCGCGCCAGTAACGCTTGTCCAGCACGTTATCCACCGTCAGCCGCAGCACCGTGTCATAccc                                <  1:402803/234‑1 (MQ=255)                                                                                                                                                                                              gtggtgGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAAc                                                                                                                            <  2:604509/138‑1 (MQ=255)                                                                                                                                                                                                 gtggATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCca                                                                                                <  1:390966/163‑1 (MQ=255)                                                                                                                                                                                                  tggATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATCGCGCCAGTAACGCTTGTCCAGCACGTTATCCACCGTCAGCCGCAGCACCGTGTCATACCCGGCAACACgg                      >  1:441819/1‑236 (MQ=255)                                                                                                                                                                                                   ggATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATCGCGCCAg                                                                                     >  2:723439/1‑172 (MQ=255)                                                                                                                                                                                                    ggccatccaccacggtgttggcTTCGCGGGCAAGccc                                                                                                                                                                                                                           <  2:269790‑M2/15‑1 (MQ=255)                                                                                                                                                                                                       ggCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTAt                                                                                                                  >  1:518258/1‑139 (MQ=255)                                                                                                                                                                                                       ggCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTAt                                                                                                                  <  2:518257/139‑1 (MQ=255)                                                                                                                                                                                                        gCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTAt                                                                                                                  <  1:571271/138‑1 (MQ=255)                                                                                                                                                                                                                 tCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATCGCGCCAGTAACGCTTGTCCAGCACGTTATCCACCGTCAGCCGCAGCACCGTGTCATACCCGGCAACACGGGTACTGTAGCGGCt        <  1:554318/235‑1 (MQ=255)                                                                                                                                                                                                                  cGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGaa                                                                                                                             <  1:418774/117‑1 (MQ=255)                                                                                                                                                                                                                    cccGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATCGCGCCAGTAACGCTTGTCCAGCACGTTATCCACCGTCAGCCGCAGCACCGTGTCATACCCGGCAACACGGGTACTGTAGCGGCTGCCa    <  1:163263/236‑1 (MQ=255)                                                                                                                                                                                                                     ccGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATCGCGCCAGTAACGCTTGTCCAGCACGTTATCCACCGTCAGCCGCAGCACCGTGTCATACCCGGCAACACGGGTACTGTAGCGGCTg       >  1:361062/1‑232 (MQ=255)                                                                                                                                                                                                                      cGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATCGCGCCAGTAACGCTTGTCCAGCACGTTATCCACCGTCAGCCGCAGCACCGTGTCATACCCGGCAACACGGGTACTGTAGCGGCTGCCAAg  >  1:115938/1‑236 (MQ=255)                                                                                                                                                                                                                       gtgtTCGCGGGCAAGCCCGCTCCCACAGGTAGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATccccc                                                                                                             <  2:226784/128‑1 (MQ=255)                                                                                                                                                                                                                          ttCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATCGCGCCAGTAACGCTTGTCCAGCACGTTATCCACCGTCAGCCgca                                                <  2:734740/186‑1 (MQ=255)                                                                                                                                                                                                                          |                                                                                                                                                                                                                                        GCTGGTCTCGATACTGGATACGATTAACCGGCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATCGCGCCAGTAACGCTTGTCCAGCACGTTATCCACCGTCAGCCGCAGCACCGTGTCATACCCGGCAACACGGGTACTGTAGCGGCTGCCAAG  >  AE015451/2071000‑2071448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.