New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 2290891 | 33 (0.810) | 3 (0.080) | 3/320 | NT | 8.2% | coding (242/960 nt) | PP_2018 | BNR domain protein |
? | AE015451 | = 2290917 | 36 (0.920) | coding (268/960 nt) | PP_2018 | BNR domain protein |
ATACTCCACCGAATCGGCCAAGGCCAGCCAAAGCCTGTTGATCGACGCCACCCATGCCGGCAAGCGCCTGGTGGTGGTGGGTGATCGCGGCCACATTCTGTTCTCCGACGACCAGGGCAGTACCTGGACCCAGGCTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTGGCCGAGCGGCTGGACAACCCGGACCAGCTGCACCTGAACGGTATCGCCCAAGTGCGCGATGCC > AE015451/2290688‑2291138 | aTACTCCACCGAATCGGCCAAGGCCAGCCAAAGCCTGTTGATCGACGCCACCCATGCCGGCAAGCGCCTGGTGGTGGTGGGTGATCGCGGCCACATTCTGTTCTCCGACGACCAGGGCAGTACCTGGACCCAGGCTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCAccgac > 1:611398‑M2/1‑230 (MQ=255) ggCAAGCGCCTGGTGGTGGTGGGTGATCGCGGCCACATTCTGTTCTCCGACGACCAGGGCAGTACCTGGACCCAGGCTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCg > 1:198311/1‑235 (MQ=255) tCGCGGCCACATTCTGTTCTCCGACGACCAGGGCAGTACCTGGACCCAGGCTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGCCGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGcc > 1:264753/1‑190 (MQ=255) tCGCGGCCACATTCTGTTCTCCGACGACCAGGGCAGTACCTGGACCCAGGCTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGc > 2:741476/1‑233 (MQ=255) ttCTGTTCTCCGACGGCCAGGGCAGTACCTGGACCCAGGCTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGcc < 2:646264/233‑1 (MQ=255) cgacgaCCAGGGCAGTACCTGGACCCAGGCTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATg < 1:588644/236‑1 (MQ=255) gacgacCAGGGCAGTACCTGGACCCAGGCTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGCTGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATg > 1:216507/1‑235 (MQ=255) aGGGCAGTACCTGGACCCAGGCTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGCGAAGc > 2:97333/1‑169 (MQ=255) cccAGGCTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGaaa > 1:66922/1‑228 (MQ=255) cccAGGCTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGAt > 1:611197/1‑236 (MQ=255) aGGCTCGGGTACCCCCCCGGCAATTGCTCACCGCCGTGGTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGc < 2:208783/186‑1 (MQ=255) cTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCAccgacggcccagccacgcttgtcgtcgaggaaaa < 1:387866‑M2/130‑35 (MQ=255) cTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCAccgacggcccagccacgcttgtcgtcgaggaaaa > 2:387865‑M2/1‑96 (MQ=255) cTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGcc < 2:412952/194‑1 (MQ=255) cTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGt > 1:208784/1‑196 (MQ=255) tCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAac > 1:12420/1‑222 (MQ=255) cGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCCCGGCTTTGCCGt > 2:398204/1‑194 (MQ=255) cGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTgg > 1:263185/1‑217 (MQ=255) gggTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGgca < 1:191692/235‑1 (MQ=255) cGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGa > 1:702713/1‑236 (MQ=255) tCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTggg < 2:198310/212‑1 (MQ=255) tCACTGCCGTGTTTTTCCTCCACGCCAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGcc < 2:73836/170‑1 (MQ=255) aCTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTGGCCGAg > 2:602579/1‑234 (MQ=255) ccGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTGGCCGAGCGGCt < 1:541971/235‑1 (MQ=255) ccGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTGGCCGAGCGGCt < 1:469538/235‑1 (MQ=255) ttttCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTGGACGAGCGGCTGGACAAc > 1:720897/1‑236 (MQ=255) tttCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTGGCCGAGCGGCt < 1:475968/228‑1 (MQ=255) ttCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTGGCCGAGCGGCTGGACAAccc < 1:741477/236‑1 (MQ=255) cgacgaCAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTgg > 2:546146/1‑212 (MQ=255) cgacgaCAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTgg < 1:546147/212‑1 (MQ=255) cgacgaCAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTCGCTCGATGCCACCTTCCTCGACGCCCCGCACGGCtt > 2:89411/1‑147 (MQ=255) cGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTGGCCGAGCGGCTGGACAACCCGGACCAGCTGCACCt < 1:602580/236‑1 (MQ=255) tGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTGGCCGAGCGGCTGGACAACCCGGACCAGCTGCACCTGa > 1:493353/1‑236 (MQ=255) ggCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTGGCCGAGCGGCTGGACAACCCGGAcccg > 2:594134/1‑218 (MQ=255) cGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTggg < 2:239433/172‑1 (MQ=255) gTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGAAAGCAGTTCGAAGACCGCGCCCGTGAAGCCCCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAgg < 1:226376/184‑1 (MQ=255) gCCATGACGCGCAGATCCTCGCCGGCAccgaccgcccagccgcgcttgtcgtcgaggaaaaacacggcagtgagcaattgccgggtgggtacccgagc > 1:598634‑M2/1‑27 (MQ=255) ccATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTGGCCGAGCGGCTGGACAACCCGGACCAGCTGCACCTGAACGGTATCGCCCaa > 1:310148/1‑235 (MQ=255) gATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTGGCCGAGCGGCTGGACAACCCGGACCAGCTGCACCTGAACGGTATCGCCCAAGTGCGCGATGcc < 1:399602/235‑1 (MQ=255) cGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGc > 2:433652/1‑158 (MQ=255) cAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCCCCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTGGCCGAGCGGCt < 1:212078/174‑1 (MQ=255) | ATACTCCACCGAATCGGCCAAGGCCAGCCAAAGCCTGTTGATCGACGCCACCCATGCCGGCAAGCGCCTGGTGGTGGTGGGTGATCGCGGCCACATTCTGTTCTCCGACGACCAGGGCAGTACCTGGACCCAGGCTCGGGTACCCACCCGGCAATTGCTCACTGCCGTGTTTTTCCTCGACGACAAGCGTGGCTGGGCCGTCGGCCATGACGCGCAGATCCTCGCCAGCACCGACGGCGGCGCCACCTGGAGCAAGCAGTTCGAAGACCTCGCCCGTGAAGCACCCTTGCTCGATGTCACCTTCCTCGACGCCCAGCACGGCTTTGCCGTGGGGGCCTATGGTGCCTTGCTGGAAACCACCGATGGTGGGCAGCACTGGCAGGATGTGGCCGAGCGGCTGGACAACCCGGACCAGCTGCACCTGAACGGTATCGCCCAAGTGCGCGATGCC > AE015451/2290688‑2291138 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |