New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5822202	48 (1.170)	3 (0.080)	3/304	NT	6.6%	coding (162/435 nt)	PP_5099	conserved protein of unknown function
	?	AE015451	= 5822186	42 (1.140)					coding (146/435 nt)	PP_5099	conserved protein of unknown function

ACCGCGTCAGCAGTCCGGGCCTGCAAGAGCATCAGCTCGCGGTCTGACGCCCACCGGAGGAATCGCACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGAAACCGTCACCTTCGACTTGAAC  >  AE015451/5821972‑5822412                                                                                                                                                                                                                       |                                                                                                                                                                                                                                   aCCGCGTCAGCAGTCCGGGCCTGCAAGAGCATCAGCTCGCGGTCTGACGCCCCCCGGAGGAACCGCACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAggtggccgcgg                                                                                                                                                                                                                         >  1:159449‑M2/1‑215 (MQ=255)    gcgTCAGCAGTCCGGGCCTGCAAGAGCATCAGCTCGCGGTCTGACGCCCACCGGAGGAATCGCACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGt                                                                                                                                                                                                            <  1:8358/236‑1 (MQ=255)         agcagTCCGGGCCTGCAAGAGCATCAGCTCGCGGTCTGACGCCCACCGGAGGAATCGCACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCgca                                                                                                                                                                                                       <  1:440320/236‑1 (MQ=255)                      tGCAAGAGCATCAGCTCGCGGTCTGACGCCCACCGGAGGAATCGCACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAgg                                                                                                                                                                                           >  1:348840/1‑235 (MQ=255)                                   gCTCGCGGTCTGACGCCCACCGGAGGAATCGCACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGc                                                                                                                                                                                         <  1:561093/224‑1 (MQ=255)                                             tGACGCCCACCGGAGGAATCGCACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTc                                                                                                                                                                    <  1:270242/235‑1 (MQ=255)                                               aCGCCCACCGGAGGAATCGCACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCACGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCCCGAGCCTGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTgg                                                                                                                                                                                                             >  1:395414/1‑192 (MQ=255)                                                 gCCCACCGGAGGAATCGCACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAggtggccgcggcc                                                                                                                                                                                                                       <  2:186398‑M2/180‑14 (MQ=255)                                                  cccACCGGAGGAATCGCACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAggtgg                                                                                                                                                                                                                               >  1:501993‑M2/1‑166 (MQ=255)                                                         ggggaATCGCACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCa                                                                                                                                                                                  <  1:611190/207‑1 (MQ=255)                                                          aggaATAGCACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAggtggccgcggccac                                                                                                                                                                                                                     >  1:361778‑M2/1‑158 (MQ=255)                                                               tCGCACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAggtggccgcggccaccttgggtgtgagcatgctcgaggtgaatgcgctgtagtgcaccgtcacg                                                                                                                                                                    >  1:658742‑M2/1‑153 (MQ=255)                                                                  cACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAg                                                                                                                                              >  1:281861/1‑236 (MQ=255)                                                                           tCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGC                                                                                                                                                                                                                              >  2:391808‑M1/1‑147 (MQ=255)                                                                           tCGCCTAGCCCTGTTCCTGATCAGCCTGCGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGa                                                                                                                                                                                                 <  1:258198/176‑1 (MQ=255)                                                                                tAGCCCTGTTCCTGCTCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGt                                                                                                                                                                                                            <  1:210694/160‑1 (MQ=255)                                                                                tAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCTCACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGc                                                                                                                                             >  2:649955/1‑223 (MQ=255)                                                                                     cTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCttgggtgtgagcatgctcgaggtgaatgcgctgta                                                                                                                                                                                 <  1:744052‑M1/182‑36 (MQ=255)                                                                                                     tgtgCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAggtgg                                                                                                                                                                                                                               >  1:573128‑M2/1‑115 (MQ=255)                                                                                                     tgtgCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGG                                                                                                                                                                                                                               >  2:573127‑M1/1‑120 (MQ=255)                                                                                                                cTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTc                                                                                                                                                                                   >  2:534006/1‑153 (MQ=255)                                                                                                                cTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGgcg                                                                                                         >  2:593085/1‑227 (MQ=255)                                                                                                                cTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGgcg                                                                                                         <  1:593086/227‑1 (MQ=255)                                                                                                                    cAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTg                                                                                                                                         >  1:32783/1‑191 (MQ=255)                                                                                                                       tATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCg                                                                                         <  1:457191/236‑1 (MQ=255)                                                                                                                         ttGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCAGTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGtt                                                                                       <  1:346199/236‑1 (MQ=255)                                                                                                                             ctgccgctgccgCACGCCCCGCGCGCAAGGAGGTATTTGGCGCCGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACCCCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGACCCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCaa                                                                                                                                                         <  2:204992/166‑1 (MQ=255)                                                                                                                             cTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCCCCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCt                                                                                                                                                                                    <  1:249855/139‑1 (MQ=255)                                                                                                                                     gCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCaa                                                                                                                                                         <  2:548917/158‑1 (MQ=255)                                                                                                                                            gCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACa                                                                     <  1:739045/235‑1 (MQ=255)                                                                                                                                            gCCCCGAGAGAAAGGAGGTGTTTGGCGCCGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCCCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGAgca                                                                                                                                                                                                       <  2:547234/105‑1 (MQ=255)                                                                                                                                              cccGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAgg                                                                   <  1:187926/235‑1 (MQ=255)                                                                                                                                               ccGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGgc                                                                 <  1:186399/236‑1 (MQ=255)                                                                                                                                                 gAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGgc                                                                 <  2:348839/234‑1 (MQ=255)                                                                                                                                                          gaggGATTTGGCGACGTGACGGTGCACTACAGCGCAGTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCttgggtgtgagcatgcgcgaggtgaat                                                                                                                                                                                         <  2:41255‑M1/105‑28 (MQ=255)                                                                                                                                                           aggTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAAcc                                                                                                                                                                                              <  1:499755/99‑1 (MQ=255)                                                                                                                                                           aggTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAAcc                                                                                                                                                                                              >  2:499754/1‑99 (MQ=255)                                                                                                                                                              tATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATc                                                  <  1:231296/236‑1 (MQ=255)                                                                                                                                                                tttGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCCATGCCGGCCAGCCCACCCCAGCCCTGGTccg                                                                                                                                    >  2:29336/1‑150 (MQ=255)                                                                                                                                                                        cGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCttgggtgtgagcatgctcgaggtgaatgcgctgtagtgcaccgtcacgtcgccaaatacctccttgcgctcggggcgtgcggcatcggcagccaatactggcagggccaggcacaggctgatcaggaacagggctaggcgacgcatggtgcga                                                           >  1:658742‑M1/1‑64 (MQ=255)                                                                                                                                                                        cGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGCGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGccc                                              >  1:20158/1‑230 (MQ=255)                                                                                                                                                                           gACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCGAGCCCACCCCAGCACTg                                                                                                                                         >  2:580014/1‑136 (MQ=255)                                                                                                                                                                                     tACAGCGCATTCACCTCGAGCATGCTCACACCCAAggtggccgcggccaccttgggtgtgagcatgctcgaggtgaatgcgctgtagtgcaccgtcacgtcgccaaatacctccttgcgctcggggcgtgcggcatcggcagccaatactggcagggccaggcacaggctgatcaggaacag                                                                                 <  1:744052‑M2/182‑148 (MQ=255)                                                                                                                                                                                             aTTCACCTCGCGCATGCTCACACCCAAggtggccgcggccaccttgggtgtgagcatgctcgaggtgactgcgctgtagtgcaccgtcacgtcgccaaatccctc                                                                                                                                                      <  2:41255‑M2/105‑79 (MQ=255)                                                                                                                                                                                             aTTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGaac                      >  2:368872/1‑232 (MQ=255)                                                                                                                                                                                             aTTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGCTCACGCa                                                                                 >  2:210680/1‑174 (MQ=255)                                                                                                                                                                                               tCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGc                                                                                                                                   <  1:622296/122‑1 (MQ=255)                                                                                                                                                                                               tCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGc                                                                                                                                   >  2:622295/1‑122 (MQ=255)                                                                                                                                                                                                  ccTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCACGCAGATTACCGAACAGGGCTCGGTGTCtt                                                       >  1:198153/1‑195 (MQ=255)                                                                                                                                                                                                     cGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGAAACCGTCACCtt            >  1:340951/1‑235 (MQ=255)                                                                                                                                                                                                              tCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCaa                                                                                                                                                         >  2:214358/1‑85 (MQ=255)                                                                                                                                                                                                              tCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCaa                                                                                                                                                         <  1:214359/85‑1 (MQ=255)                                                                                                                                                                                                              tCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGAAACCGTCACCTTCGACTTGAAc  >  1:316731/1‑236 (MQ=255)                                                                                                                                                                                                              tCACACCCAAGGTGGCCGCGGCCACCGGCCTGGCGCGCAGCCAGAACCAGGGCGTGCTCAACATTg                                                                                                                                                                            >  2:102518/1‑66 (MQ=255)                                                                                                                                                                                                               cacaCCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAgatcga                                 >  2:483389/1‑204 (MQ=255)                                                                                                                                                                                                                acccccAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCgct                                                                                                           <  2:475816/126‑3 (MQ=255)                                                                                                                                                                                                                   cccACGGTGGCCGCGGCCACAGGCCTGGTGCGCAGCAAGAACCAGGGCGGGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTAcc                                                                          <  1:37966/159‑1 (MQ=255)                                                                                                                                                                                                                       |                                                                                                                                                                                                                                   ACCGCGTCAGCAGTCCGGGCCTGCAAGAGCATCAGCTCGCGGTCTGACGCCCACCGGAGGAATCGCACCATGCGTCGCCTAGCCCTGTTCCTGATCAGCCTGTGCCTGGCCCTGCCAGTATTGGCTGCCGATGCCGCACGCCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGAAACCGTCACCTTCGACTTGAAC  >  AE015451/5821972‑5822412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.