Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	3579928	3580057	130	11 [10]	[8] 11	benR	BenABC operon transcriptional activator

GTTGCATTGCCCAACCCCCGCCTTTTTGCTGTAGTGTCCCCTATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCTGTCCC  >  AE015451/3579694‑3579977                                                                                                                                                                                                                                          |                                                   gTTGCATTGCCCAACCCCCGCCTTTTTGCTGTAGTGTCCCCTATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCtgt                                                    <  2:542556/234‑1 (MQ=255)              aCCCCCGCCTTTTTGCTGTAGTGTCCCCTATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGaa                                     <  1:169765/236‑1 (MQ=255)                   cGCCTTTTTGCTGTAGTGTCCCCTATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGc                                <  1:316/236‑1 (MQ=255)                       tttttGCTGTAGTGTCCCCTATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGCTTATGTGAACCAGCATg                             >  1:143337/1‑235 (MQ=255)                       tttttGCTGTAGTGTCCCCTATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGt                            >  1:197964/1‑236 (MQ=255)                                       cccTATCCGCCGGCTGGCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATc            <  1:394477/236‑1 (MQ=255)                                                 cgGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATc            <  2:197963/226‑1 (MQ=255)                                                 cgGCTGGCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCTGTccc  <  1:136864/236‑1 (MQ=255)                                                    cTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGt         >  1:536592/1‑226 (MQ=255)                                                    cTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGt         <  2:536591/226‑1 (MQ=255)                                                               cccTGCGACGCGCCGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATc            <  2:143336/212‑1 (MQ=255)                                                                                                                                                                                                                                          |                                                   GTTGCATTGCCCAACCCCCGCCTTTTTGCTGTAGTGTCCCCTATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCTGTCCC  >  AE015451/3579694‑3579977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑