Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	3287061	3287341	281	11 [9]	[10] 11	[PP_2889]–[xthA]	[PP_2889],[xthA]

GAGGTTGGGGTTGTAAGTGTGGGCCCAAGGTGTGCACCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTT  >  AE015451/3287244‑3287539                                                                                                   |                                                                                                                                                                                                      gAGGTTGGGGTTGTAAGTGTGGGCGCAAGGTGTGCACCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGTGGCCATGATCAGGTCGATgcg                                                                                                                    >  2:408417/1‑182 (MQ=255)                       gCCCAAGGTGTGCACCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCgg                                         >  1:676439/1‑235 (MQ=255)                                           gCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGt                                                                        <  1:469541/184‑1 (MQ=255)                                           gCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGt                                                                        >  2:469540/1‑184 (MQ=255)                                                   cccTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGGTGCGGAAGCTGTCTACCaa              >  2:604387/1‑234 (MQ=255)                                                               cAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATccc                                                                                                                                                                                               <  1:392006/45‑1 (MQ=255)                                                               cAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATccc                                                                                                                                                                                               >  2:392005/1‑45 (MQ=255)                                                                aaCTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCttt  >  2:683322/1‑233 (MQ=255)                                                                               ggCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTAGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACAGTCGGTCACGTCCgg                                         >  1:68/1‑179 (MQ=255)                                                                                gcgcATGGTCCAACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGCAGCCGCCGCTTCGGTa                                                                          >  2:58132/1‑145 (MQ=255)                                                                                                   ttCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAAcccc          >  1:218630/1‑190 (MQ=255)                                                                                                   |                                                                                                                                                                                                      GAGGTTGGGGTTGTAAGTGTGGGCCCAAGGTGTGCACCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTT  >  AE015451/3287244‑3287539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑