Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
MC JC | CP009273 | 2,093,044 | Δ2,186 bp | 100% | IS5‑mediated | [ugd]–wbbL | [ugd], gnd, wbbL |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | CP009273 | 2093044 | 2096361–2095230 | 2187–3318 | 96 [0] | [34] 35 | [ugd]–[insH1] | [ugd],gnd,wbbL,[insH1] |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | = 2093043 | 0 (0.000) | 82 (1.190) | 72/276 | NT | 100% | coding (52/1167 nt) | ugd | UDP‑glucose 6‑dehydrogenase |
? | CP009273 | 2095230 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region |
TAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGC > CP009273/2092900‑2093192 | tAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaagg > 2:933319‑M1/1‑144 (MQ=255) aTGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggt < 2:580445‑M1/149‑8 (MQ=255) aTTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaat > 2:549572‑M1/1‑135 (MQ=255) gtgtATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcgggg < 1:635169‑M1/150‑22 (MQ=255) tATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaa > 1:54399‑M1/1‑126 (MQ=255) tATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaa < 1:947588‑M1/149‑24 (MQ=255) tttATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattc > 1:29733‑M1/1‑123 (MQ=255) tATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattct < 2:1001442‑M1/149‑29 (MQ=255) aTCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttc > 2:726984‑M1/1‑120 (MQ=255) tCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttc < 1:872136‑M1/149‑31 (MQ=255) tGATTGTAAAAACTGCTGATTTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTCACGGTAAAATATCTAATCCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcg > 2:146181‑M1/1‑117 (MQ=255) aTTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggc > 2:131495‑M1/1‑115 (MQ=255) aTTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctc < 2:1037918‑M1/147‑33 (MQ=255) aTTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctc < 2:417238‑M1/147‑33 (MQ=255) ttGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggct > 1:1184192‑M1/1‑114 (MQ=255) aaaaaCTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgact > 2:571173‑M1/1‑110 (MQ=255) aaaaaCTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgact > 1:243702‑M1/1‑110 (MQ=255) aaCTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcag > 1:1079192‑M1/1‑107 (MQ=255) gctgAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATAGCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgacgctgtcat < 2:590396‑M1/150‑48 (MQ=255) ctgAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt > 1:21417‑M1/1‑102 (MQ=255) aaTTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttca < 2:800363‑M1/150‑52 (MQ=255) aaTTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc < 1:37965‑M1/149‑51 (MQ=255) aTTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat > 1:614091‑M1/1‑98 (MQ=255) tttCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt > 1:57167‑M1/1‑97 (MQ=255) tCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt < 2:144989‑M1/149‑55 (MQ=255) ttATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt > 1:162164‑M1/1‑92 (MQ=255) aTCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc < 2:796031‑M1/148‑59 (MQ=255) aacaaTAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt < 1:485044‑M1/149‑63 (MQ=255) acaaTAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt < 2:129656‑M1/150‑65 (MQ=255) acaaTAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt < 1:501608‑M1/150‑65 (MQ=255) aaTAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga < 1:768264‑M1/150‑67 (MQ=255) aaTAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt > 1:64144‑M1/1‑84 (MQ=255) aaTAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt > 2:258973‑M1/1‑84 (MQ=255) aTAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag > 2:398044‑M1/1‑83 (MQ=255) tAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc > 1:1153674‑M1/1‑82 (MQ=255) tAGAAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc > 1:1153678‑M1/1‑82 (MQ=255) ggAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg < 2:410334‑M1/150‑71 (MQ=255) ggAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcc < 1:205668‑M1/149‑70 (MQ=255) ggAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcc > 2:613116‑M1/1‑80 (MQ=255) atCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt > 1:195565‑M1/1‑74 (MQ=255) tCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt < 2:313851‑M1/150‑78 (MQ=255) tCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt < 1:887822‑M1/150‑78 (MQ=255) tCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt < 1:1086534‑M1/150‑78 (MQ=255) cGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct < 1:300252‑M1/150‑80 (MQ=255) cGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc < 2:669667‑M1/149‑79 (MQ=255) gATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc < 2:1165142‑M1/150‑81 (MQ=255) tCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc < 1:184339‑M1/150‑83 (MQ=255) cATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg > 2:912291‑M1/1‑67 (MQ=255) cATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg > 1:417812‑M1/1‑67 (MQ=255) tCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta > 1:743439‑M1/1‑64 (MQ=255) aGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat > 1:108838‑M1/1‑62 (MQ=255) aGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGAGTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat < 2:1029198‑M1/150‑89 (MQ=255) gCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg < 2:725093‑M1/150‑90 (MQ=255) aTAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcc > 1:179163‑M1/1‑59 (MQ=255) aTAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcc > 1:520705‑M1/1‑59 (MQ=255) tAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct < 2:810976‑M1/150‑93 (MQ=255) aaCGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa > 2:306082‑M1/1‑54 (MQ=255) aCGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagccta > 2:61400‑M1/1‑46 (MQ=255) aCGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagccta < 2:736127‑M1/150‑105 (MQ=255) aCGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct < 2:814390‑M1/149‑104 (MQ=255) gTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt < 2:243702‑M1/150‑108 (MQ=255) gTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt < 1:131495‑M1/150‑108 (MQ=255) gTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatt > 1:1062538‑M1/1‑43 (MQ=255) atatCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagacc < 1:933319‑M1/150‑113 (MQ=255) atCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgt > 2:1102853‑M1/1‑36 (MQ=255) tCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtt > 1:744000‑M1/1‑35 (MQ=255) tCTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgt < 2:723390‑M1/149‑115 (MQ=255) cTAATGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgttt > 2:322250‑M1/1‑34 (MQ=255) aaTGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct > 1:1022818‑M1/1‑32 (MQ=255) aTGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc < 1:549572‑M1/148‑118 (MQ=255) tGCCACAACCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc > 2:503908‑M1/1‑30 (MQ=255) aCCTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatt > 1:636100‑M1/1‑23 (MQ=255) cTCATGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt > 1:626198‑M1/1‑21 (MQ=255) aTGATTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg < 2:614091‑M1/149‑132 (MQ=255) aTTTTGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgt > 2:136810‑M1/1‑15 (MQ=255) ttttGTGCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtta < 2:64144‑M1/150‑137 (MQ=255) tgtgCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc > 1:482011‑M1/1‑11 (MQ=255) tgtgCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatc < 2:498781‑M1/149‑139 (MQ=255) gtgCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc > 2:770936‑M1/1‑10 (MQ=255) gtgCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc < 2:54399‑M1/149‑140 (MQ=255) tgCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactctgtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc < 2:21417‑M1/150‑142 (MQ=255) tgCGATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc < 2:1022818‑M1/149‑141 (MQ=255) tttgggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt > 1:742164‑M1/4‑4 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt > 1:742152‑M1/1‑4 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt > 1:1115548‑M1/1‑4 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagt < 1:1037181‑M1/148‑145 (MQ=255) tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt > 2:1089477‑M1/1‑3 (MQ=255) tAGggaaggtgcgaagaagcggggaaattcttctcggctgaagcagtcattccatttcttcatgtttgagccgattttttctaccgtaaataccttgaatcagcctatttagaccgtttcttcgccatttaaggccttatccccagtttt > 2:343245‑M1/1‑3 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt > 2:190876‑M1/1‑2 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt < 1:674446‑M1/149‑148 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt < 2:863179‑M1/149‑148 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt > 2:245814‑M1/1‑2 (MQ=255) gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttta < 2:676832‑M1/150‑150 (MQ=255) gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt < 2:1079192‑M1/149‑149 (MQ=255) gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt < 1:745617‑M1/149‑149 (MQ=255) gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt < 2:815864‑M1/149‑149 (MQ=255) | TAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGC > CP009273/2092900‑2093192 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |