New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | 1483968 = | NA (NA) | 60 (0.870) | 54/276 | NT | 100% | intergenic (+40/+2) | aldA/gapC | aldehyde dehydrogenase A, NAD‑linked/pseudogene, GAP dehydrogenase; glyceraldehyde‑3‑phosphate dehydrogenase (second fragment) |
? | CP009273 | 1858031 = | 0 (0.000) | intergenic (+8/‑76) | gapA/yeaD | glyceraldehyde‑3‑phosphate dehydrogenase A/D‑hexose‑6‑phosphate epimerase‑like protein |
GGCGAAGTTTGCACTTCCGTGTTCGATGCTAAAGCTGGTATCGCTCTGAACGACAACTTCGTGAAACTGGTATCCTGGTACGACAACGAAACCGGTTACTCCAACAAAGTTCTGGACCTGATCGCTCACATCTCCAAATAAGTTGAGATGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTGGATG > CP009273/1857883‑1858179 | atttcggttcggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgt > 2:680778‑M2/149‑149 (MQ=255) ttcggttcggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGa > 2:910515‑M2/147‑149 (MQ=255) ggttcggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGacac < 1:563775‑M2/6‑1 (MQ=255) ggttcggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACt > 2:37948‑M2/144‑150 (MQ=255) ttcggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACtgt < 1:65815‑M2/9‑1 (MQ=255) ggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGAt < 2:15969‑M2/12‑1 (MQ=255) gtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATc > 1:1067117‑M2/138‑150 (MQ=255) ttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTaa > 1:706958‑M2/134‑149 (MQ=255) cacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCg < 2:137078‑M2/24‑1 (MQ=255) gcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACt > 1:137596‑M2/124‑150 (MQ=255) gcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACt > 2:1166129‑M2/124‑150 (MQ=255) aaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTc < 1:365088‑M2/29‑1 (MQ=255) aaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTc > 1:1097717‑M2/122‑150 (MQ=255) aacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCg < 2:79979‑M2/30‑1 (MQ=255) ggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTc < 2:1039286‑M2/33‑1 (MQ=255) ggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTc < 1:963568‑M2/33‑1 (MQ=255) ggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTc > 2:520122‑M2/118‑150 (MQ=255) gaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCg > 2:132620‑M2/117‑150 (MQ=255) aaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGc > 1:532835‑M2/116‑150 (MQ=255) aaattaccgctgtgggcgatttacaactggtgaaaacgatcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGc > 2:555939‑M2/116‑150 (MQ=255) aattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGct > 2:430508‑M2/115‑150 (MQ=255) ccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCttt < 2:251013‑M2/40‑1 (MQ=255) cgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCttttt > 2:1180540‑M2/109‑150 (MQ=255) tgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCtttttttt < 1:33278‑M2/45‑1 (MQ=255) tgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCtttttttt < 1:1180540‑M2/45‑1 (MQ=255) cgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGa < 1:508002‑M2/51‑1 (MQ=255) cgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGa < 1:1124824‑M2/51‑1 (MQ=255) atttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGAt > 1:310808‑M2/98‑149 (MQ=255) atttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATa < 1:41580‑M2/53‑1 (MQ=255) tacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATaaaa > 2:770193‑M2/95‑150 (MQ=255) tacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATaaa < 2:532835‑M2/55‑1 (MQ=255) acaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAAt > 2:553532‑M2/94‑150 (MQ=255) aactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATg > 1:971726‑M2/92‑149 (MQ=255) gtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGtt < 1:628207‑M2/63‑1 (MQ=255) tgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTa > 1:1068162‑M2/86‑149 (MQ=255) aaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAgg < 2:795206‑M2/68‑1 (MQ=255) gcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTc < 1:166897‑M2/76‑1 (MQ=255) ctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCAt > 2:32716‑M2/73‑150 (MQ=255) gtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGa < 1:1052045‑M2/80‑1 (MQ=255) taacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGaa < 2:1028721‑M2/87‑1 (MQ=255) taacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGa > 2:39056‑M2/64‑149 (MQ=255) acgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGaaa < 1:584788‑M2/88‑1 (MQ=255) atatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAAtttt < 1:555939‑M2/93‑1 (MQ=255) tggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTg < 2:235023‑M2/95‑1 (MQ=255) ggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGcc > 2:71466‑M2/54‑150 (MQ=255) cttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCt < 1:32716‑M2/99‑1 (MQ=255) gtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTcc < 2:971726‑M2/102‑1 (MQ=255) acgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGt < 2:1097717‑M2/105‑1 (MQ=255) cagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATc < 2:282736‑M2/109‑1 (MQ=255) gcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCg > 1:931050‑M2/40‑149 (MQ=255) accctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTcc > 1:779075‑M2/30‑150 (MQ=255) gaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTg < 1:71466‑M2/125‑1 (MQ=255) gaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGt < 2:365579‑M2/126‑1 (MQ=255) aaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTcc > 1:374962‑M2/23‑150 (MQ=255) aaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTcc > 2:1191443‑M2/23‑150 (MQ=255) aaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCctc > 2:475671‑M2/21‑150 (MQ=255) aattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCctct < 1:266409‑M2/131‑1 (MQ=255) cgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCcg > 2:786126‑M2/16‑150 (MQ=255) gctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCcg < 1:181861‑M2/135‑1 (MQ=255) aactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCcgtcg < 1:680778‑M2/138‑1 (MQ=255) actctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTaa < 1:286673‑M2/141‑1 (MQ=255) tctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAAc > 2:1112234‑M2/8‑150 (MQ=255) tgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAAc < 2:706958‑M2/143‑1 (MQ=255) tgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAAc < 1:770193‑M2/143‑1 (MQ=255) gTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTGGATg < 1:420037‑M2/149‑1 (MQ=255) | GGCGAAGTTTGCACTTCCGTGTTCGATGCTAAAGCTGGTATCGCTCTGAACGACAACTTCGTGAAACTGGTATCCTGGTACGACAACGAAACCGGTTACTCCAACAAAGTTCTGGACCTGATCGCTCACATCTCCAAATAAGTTGAGATGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTGGATG > CP009273/1857883‑1858179 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |