| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,551,071 | C→T | 12.4% | L64F (CTT→TTT) | osmC → | lipoyl‑dependent Cys‑based peroxidase, hydroperoxide resistance; salt‑shock inducible membrane protein; peroxiredoxin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,551,071 | 0 | C | T | 12.4% | 2641.8 / 95.4 | 938 | L64F (CTT→TTT) | osmC | lipoyl‑dependent Cys‑based peroxidase, hydroperoxide resistance; salt‑shock inducible membrane protein; peroxiredoxin |
| Reads supporting (aligned to +/- strand): ref base C (448/363); new base T (11/113); total (459/479) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.47e-24 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 962 total aligned reads displayed.
ATATCAAACGCGGGAAGGGAACAGTATCCACCGAGAGTGGCGTGCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACC > CP009273/1550922‑1551220 | atatCAAACGCGGGAAGGGAACAGTATCCACCGAGAGTGGCGTGCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGgcgc > 1:1070771/1‑150 (MQ=255) ttctggctacgacattctgctaactgacggcaggcttccgagatgacccagcgcgcaatattgtcgatttcaacaaccTGAAGGCGAAAAAGGAGCTAACCCGGAAG‑AGCGGATTCGCGCAGCGCATGCCGCATGTTTCTCAATGgcgc > 2:393534‑M1/79‑149 (MQ=255) ctggctacgccattctgctaactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCttt < 1:496154‑M1/74‑1 (MQ=255) gtctacgccattctgctaactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcCGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCa < 2:783440‑M1/76‑1 (MQ=255) aaaCGCGGGAAGGGAACAGTATCCACCGAGAGTGGCGTGCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTc < 2:1071242/149‑1 (MQ=255) gctacgccattctgctaactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCAt < 1:70798‑M1/77‑1 (MQ=255) gctacgccattctgctaactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCAt > 1:679021‑M1/74‑150 (MQ=255) tacgccattctgctaactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCAtt < 2:814328‑M1/78‑1 (MQ=255) tacgccattctgctaactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCAtt < 2:544622‑M1/78‑1 (MQ=255) gccattctgctaactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATg > 1:22200‑M1/69‑150 (MQ=255) cattctgctaactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCt < 1:573570‑M1/84‑1 (MQ=255) attctgctaactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTg > 2:166814‑M1/66‑150 (MQ=255) ttctgctaactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTgg > 1:1001903‑M1/65‑150 (MQ=255) ttctgctaactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTgg > 1:122927‑M1/65‑150 (MQ=255) ggaaCAGTATCCACCGAGAGTGGCGTGCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTgggg > 2:700258/1‑150 (MQ=255) ggaaCAGTATCCACCGAGAGTGGCGTGCTGAAACAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTgggg > 1:144412/1‑150 (MQ=255) ctaactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTggggg > 1:837591‑M1/60‑148 (MQ=255) ctaactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTggggg < 2:1112305‑M1/89‑1 (MQ=255) taactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGc < 1:1089948‑M1/83‑1 (MQ=255) taactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAg < 1:701280‑M1/92‑1 (MQ=255) taactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAg < 2:741178‑M1/92‑1 (MQ=255) aactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGc < 2:658015‑M1/93‑1 (MQ=255) aactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGc < 1:898148‑M1/93‑1 (MQ=255) actgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGc > 2:1006641‑M1/57‑149 (MQ=255) actgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGc > 2:974350‑M1/57‑149 (MQ=255) actgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCg > 1:269801‑M1/57‑150 (MQ=255) ctgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCgg < 2:114331‑M1/95‑1 (MQ=255) ggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGAtt < 1:195499‑M1/99‑1 (MQ=255) caagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCAc > 2:1192905‑M1/49‑150 (MQ=255) aagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACg < 1:634577‑M1/103‑1 (MQ=255) agcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGc < 1:289104‑M1/104‑1 (MQ=255) gcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGcc > 2:1165419‑M1/46‑150 (MQ=255) cttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCa > 2:287771‑M1/45‑150 (MQ=255) ttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCaa < 2:1052288‑M1/107‑1 (MQ=255) ccgcgatgacccagcgcccaatagtttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAAc > 1:592396‑M1/42‑149 (MQ=255) gCGTGCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACa < 1:745817/149‑1 (MQ=255) cgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACa > 1:609040‑M1/41‑149 (MQ=255) cgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGTGGAAGCGGGATTCACGCCAACATc < 1:1017787‑M1/111‑1 (MQ=255) gatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGa < 2:935881‑M1/113‑1 (MQ=255) gacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCt < 2:414692‑M1/84‑1 (MQ=255) agcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATacc > 1:802816‑M1/30‑150 (MQ=255) gcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATacca < 1:388749‑M1/122‑1 (MQ=255) gcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATacca > 1:483679‑M1/29‑150 (MQ=255) cgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATaccac < 2:837092‑M1/123‑1 (MQ=255) gcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATaccacc > 1:245061‑M1/27‑150 (MQ=255) cccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCAccg > 1:539464‑M1/26‑150 (MQ=255) ccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCAccgc > 2:953428‑M1/25‑150 (MQ=255) aatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGTTTCGCGCCAACATCGATTGATACCAccgccg > 2:528887‑M1/23‑150 (MQ=255) attttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGAtg < 2:213502‑M1/131‑1 (MQ=255) attttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGAtg < 2:679896‑M1/131‑1 (MQ=255) ttttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAAt > 1:340692‑M1/19‑99 (MQ=255) tttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGAtgtg < 1:845748‑M1/133‑1 (MQ=255) tttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGAtgtg < 1:3227‑M1/133‑1 (MQ=255) gatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGc < 2:853364‑M1/137‑1 (MQ=255) ttccaccaatcTGAAGGCGAAAAAGGAACCACCCCTGAAG‑AACTGATTGGCGCAGCGCAGGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTg > 1:767143‑M1/12‑150 (MQ=255) caatcTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATa < 2:375483‑M1/143‑1 (MQ=255) aatcTGAAGGCAAAAAAGGAACCAACCCGGAAG‑AACTGATTGGCGCAGCGCATGCCGCATTTTTCTCAAGGGCGTTTTCATAAATGCTGGGGGAGGGGGGATTCACGCAAAAATCGTTTGATACCACCGCCGATGTGTCGCTGGATAAAg > 2:270072‑M1/5‑150 (MQ=255) aaGGCGAAAAAGGAACCACCCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATTTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGAt < 1:726259/149‑1 (MQ=255) aaGGCGAAAAAGGAACCAACCCGGAAG‑AACTGATTGGCGCAGCGCATGCCGAATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGAAGGCGGGATTCACGCCAACATCGTTTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATg < 1:444956/150‑1 (MQ=255) cGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCgg > 2:437856/1‑150 (MQ=255) gAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGt > 2:512506/1‑150 (MQ=255) aaaaaaGGAACCACCCCGGAAG‑AACTGATTGGCGCGGCGCATGCCGCATGTTTCTAAATGGCGCTTTAATTAAGGCTGGGGGAAGGGGGATTCACCCAAACATCGTTTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGt < 2:500431/149‑1 (MQ=255) aaaaaGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGtt > 1:990052/1‑150 (MQ=255) ggAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGc > 1:619468/1‑149 (MQ=255) aaccaaccCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGAt > 1:943454/1‑150 (MQ=255) cccaaccCTGAAG‑AACGGTTGGGCGCAGCGCGTGCCGCATGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAGGGGGGATTCACGCCAACATCGATTGATCCCGCCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGAtt < 2:235089/149‑1 (MQ=255) acccacccTGAAGTAACGGATTGGCGCGGCGAGGGCCGATTTTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAGGGGGTATTCCCCCCAACATCGTTTGATCCCTCCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGAt < 2:578294/150‑1 (MQ=255) accaaccCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCACGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGAt > 2:912248/1‑149 (MQ=255) cccTAAAG‑AATTGATGGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGCGGGATTCCCCCCAACATCGATTAATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGaa < 1:399517/150‑1 (MQ=255) ccTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGaa > 2:308939/1‑149 (MQ=255) gaag‑aaCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATc > 2:198614/1‑150 (MQ=255) gaaa‑aaCTGATTGGCGCGGCGAATGCCGCTTGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGGGGAATTCACGCAACCATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATc < 2:793778/150‑1 (MQ=255) aag‑atCTGATTGAGGCAGCCCACGCCGCATTTTCCTCAATGGCGCTTTCATTAATGGTGGGGGAGGCGGGCTTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAAt < 1:42531/148‑1 (MQ=255) aag‑aaCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCCCGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCg < 1:114331/150‑1 (MQ=255) ag‑aaCTGATTGGCGCAGCGCATGCCGCTTTTTTCTCAATGGCGTTTTCATTAATGCGGGGGGAGGCGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGc < 2:143944/150‑1 (MQ=255) tGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTg > 2:717797/1‑149 (MQ=255) gATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTg > 2:632757/1‑148 (MQ=255) aTTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTg > 1:312088/1‑147 (MQ=255) ggCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAagag < 1:966908/149‑1 (MQ=255) ggCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGt > 1:169508/1‑150 (MQ=255) gcgcggcgcaTGCCGCTTTTTTCTCAATGGCGTTTTAATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTg < 2:1101/150‑1 (MQ=255) gcgcagcgcaTGCCGCATTTTTCCCAATGGCGCTTTCATTAAGGCTGGGGGAAGCGGGATTCACGCAAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTg < 1:932043/150‑1 (MQ=255) gcagcgcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCGGGGGGAGGCGGGATTCACGCCAACATCGTTTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGaa < 1:1172852/150‑1 (MQ=255) cagcgcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAg > 2:869251/1‑150 (MQ=255) agcgcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGt > 1:1113445/1‑150 (MQ=255) agcgcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGt > 1:363030/1‑150 (MQ=255) gcaTGCCGCATGTTTCTCAAGGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGc < 1:883234/150‑1 (MQ=255) aTGCCGCATGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGGGGGGTTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCgg < 1:515899/150‑1 (MQ=255) tGCCGCATGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAGGGGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGt < 1:1045153/150‑1 (MQ=255) gCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTg > 2:1032420/1‑150 (MQ=255) gCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCg < 1:658905/150‑1 (MQ=255) gCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCg > 2:620844/1‑150 (MQ=255) aTGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAGGGGGGATTCACGCCAACATCAATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCggg < 1:35236/150‑1 (MQ=255) aTGTTTCTCAATGGCGTTTTCATTAATGCGGGGGGAAGCGGGATTAACGCCACCATCTATTAATCCCGCCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCggg < 2:32373/150‑1 (MQ=255) aTGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCggg > 2:560609/1‑150 (MQ=255) tGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCggg > 2:345264/1‑149 (MQ=255) gTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTa > 2:464572/1‑150 (MQ=255) cAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGCTTCACGCCAACATCGCTTGATACCACCGCCGCTGTGTCGCTGGATAAAGCGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGACGTTGCGGAGCCGGGTATTGATg > 2:604087/1‑150 (MQ=255) gcgcTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCctc < 1:914260/149‑1 (MQ=255) gcTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTAc > 2:881980/1‑150 (MQ=255) | ATATCAAACGCGGGAAGGGAACAGTATCCACCGAGAGTGGCGTGCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAG‑AACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACC > CP009273/1550922‑1551220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |