| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,551,091 | A→G | 7.1% | E70E (GAA→GAG) | osmC → | lipoyl‑dependent Cys‑based peroxidase, hydroperoxide resistance; salt‑shock inducible membrane protein; peroxiredoxin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,551,091 | 0 | A | G | 7.1% | 2773.1 / 14.5 | 944 | E70E (GAA→GAG) | osmC | lipoyl‑dependent Cys‑based peroxidase, hydroperoxide resistance; salt‑shock inducible membrane protein; peroxiredoxin |
| Reads supporting (aligned to +/- strand): ref base A (448/382); new base G (11/102); total (459/485) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.75e-21 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 959 total aligned reads displayed.
ACAGTATCCACCGAGAGTGGCGTGCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGA > CP009273/1550942‑1551239 | aactgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGc < 2:435615‑M1/93‑1 (MQ=255) actgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAg > 2:627389‑M1/57‑148 (MQ=255) actgacggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAg > 2:824291‑M1/57‑148 (MQ=255) cggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGAtt > 2:158781‑M1/52‑150 (MQ=255) ggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGAtt < 1:1101‑M1/99‑1 (MQ=255) ggcaagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGAtt < 2:920153‑M1/99‑1 (MQ=255) aagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACg > 1:618496‑M1/48‑150 (MQ=255) aagcttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACg < 1:587028‑M1/103‑1 (MQ=255) cttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCa > 2:287771‑M1/45‑150 (MQ=255) agTGGCGTGCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGcc > 2:538672/1‑149 (MQ=255) tccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCaa < 2:862379‑M1/107‑1 (MQ=255) ccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAAc > 1:1112305‑M1/42‑149 (MQ=255) cgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACa > 1:1168767‑M1/41‑149 (MQ=255) cgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATc < 1:384525‑M1/111‑1 (MQ=255) cgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCg > 1:877531‑M1/39‑150 (MQ=255) atgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGAt > 1:107465‑M1/37‑150 (MQ=255) tgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGAtt < 2:1105657‑M1/115‑1 (MQ=255) tgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGAtt > 2:906132‑M1/36‑150 (MQ=255) cccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGAt > 2:1035019‑M1/33‑150 (MQ=255) cccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGAt > 1:658015‑M1/33‑150 (MQ=255) aaCCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGAt < 1:537982/150‑1 (MQ=255) gcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATaccacc < 2:141140‑M1/124‑1 (MQ=255) gcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATaccacc < 2:738829‑M1/124‑1 (MQ=255) gcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATaccacc < 2:697729‑M1/124‑1 (MQ=255) cccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCAccg < 1:712964‑M1/125‑1 (MQ=255) atattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGa > 1:350906‑M1/22‑150 (MQ=255) tattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGAt < 1:572681‑M1/130‑1 (MQ=255) tattttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGAt < 1:326562‑M1/130‑1 (MQ=255) ttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATgtgt < 2:1059377‑M1/134‑1 (MQ=255) ttcgatttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATgtgt < 2:50981‑M1/134‑1 (MQ=255) tttcaccaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTg < 2:959245‑M1/139‑1 (MQ=255) accaatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGAt < 2:399517‑M1/142‑1 (MQ=255) cgTTTTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATa > 1:179203/1‑148 (MQ=255) caatcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATa < 1:139759‑M1/143‑1 (MQ=255) aatcTGAAGGCAAAAAAGGAA‑CCAACCCGGAAGAACTGATTGGCGCAGCGCATGCCGCATTTTTCTCAAGGGCGTTTTCATAAATGCTGGGGGAGGGGGGATTCACGCAAAAATCGTTTGATACCACCGCCGATGTGTCGCTGGATAAAg > 2:270072‑M1/5‑150 (MQ=255) atcTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATGGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGt > 1:411946‑M1/4‑150 (MQ=255) cTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTg < 1:793618‑M1/148‑1 (MQ=255) gagggagAAAAAGGAC‑CCACCCCTGAAGACCTGATTGGCGCAGCCCAGCCCGGATGTTTCTCAAGGGCGCTTTCATTAATGTTGGGGGAAGCGGTATCCACGCAAACATCGATTATTACCACCGCCGATGTGTCGCTGGATAAAGTGGAt < 2:313495/144‑1 (MQ=255) gAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGAt > 1:509547/1‑150 (MQ=255) gAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATGGGCACAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGGGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGAt < 1:1047861/150‑1 (MQ=255) agggCAAAAAAGGAA‑CCACCCCGGAAGAACTGATGGGCGCAGCGCATGCCGAATTTTTCTAAATGGCGTTTTCATAAATGTTGGGGGAGGGGGGATTCACGCAAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTg < 2:880640/144‑1 (MQ=255) aaGGCGAAAAAGAAA‑CCACCCCTAAAAAACTGATTGGCGCAGCGCATGCCGCATTTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGGGGGATTCACGCCAACATCGTTTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATg < 1:679896/150‑1 (MQ=255) gaaaaaaaGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACCCAAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCg < 1:841220/147‑1 (MQ=255) gaaaaaaaGGAA‑CAACCCCAGAAAAATTGATGGGCGCAGCGCATGCCGCATGTTCCTCAATGGCGTTTTAATAAATGCTGGGGGAAGGGGGATCCACGCAAAAATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCg < 2:938510/147‑1 (MQ=255) gAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATTTTTCTCAATGGCGCTTTCATTAATGCGGGGGGAAGCGGGATTCCCGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGt < 1:492511/150‑1 (MQ=255) aaaaaGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGtt > 1:903489/1‑150 (MQ=255) aaaaGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGttt > 1:223017/1‑150 (MQ=255) aaaaGAAA‑CCAACCCGAAAGACCTGATAGGCGCAGCAAAGCCCGCATGTTCCTCAATGGCCCTTCAATTATTGCGGGGGGAAGGGGGATTCACGCCACCATCGATTAAACCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGttt < 1:996599/150‑1 (MQ=255) aaaGGAACCCACCCCGGAGGAACTGATGGGGGCAGGGCTGGCCCGTTTTTTCTCAAGGGCGTTTTAATGAATGCTGGGGGAAGGGGGATCCGCGAAAACACGGATGGATACAACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGttt < 2:1124508/150‑1 (MQ=255) aaaGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGtttt < 1:1004018/150‑1 (MQ=255) aaGGAA‑CCACCCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAAGGGCGTTTTCATTAATGCGGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTg < 1:606360/150‑1 (MQ=255) agaaa‑ccaaccCGGAAAAACTGATTGGCGCGGCGAATGCCGCATTTTTCTCAATGGCGTTTTAATAAATGCTGGGGGAAGGGGGATTCACCCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGc < 2:384927/147‑1 (MQ=255) aGGAA‑CCAACCCGGAAGAACTGATTGGCGCAGCGCATGCCGCATTTTTCTAAAGGGCGCTTTCATTAATGCGGGGGGAAGCGGGATTCACGCAAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGc < 2:672561/150‑1 (MQ=255) a‑ccacccCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTAAATGGCGTTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGAtt < 2:528432/150‑1 (MQ=255) ccacccCTGAAGAACTGATTGGCGCAGCGCATGCCGCATTTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGCGGGATCCCCGCCAACATCGTTTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTa < 1:1182130/150‑1 (MQ=255) cccTGAAGAACTGATTGGCGCAGCGCATGCCGAATGTTTCTCAAGGGCGTTTTAATAAATGCGGGGGAAAGGGGGATTCACGCAACCATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGaa < 1:361430/150‑1 (MQ=255) cTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGaaaa > 1:196797/1‑150 (MQ=255) tGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAAt > 1:75956/1‑150 (MQ=255) gaagaaCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATc > 2:198614/1‑150 (MQ=255) aagaaCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCCCGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCg < 1:114331/150‑1 (MQ=255) aagaaCTGATTGGCGCAGCGCATGCCGCATGTTTCTAAAGGGCGCTTTCATTAATGCTGGGGGAGGCGGGATTCACGCCAACATCGTTTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCg < 2:491807/150‑1 (MQ=255) gaaCTGATTGGCGCGGCGCATGCCGCATTTTTCTAAATGGCGTTTTAATAAATGCTGGGGGAAGGGGGATTCACGCCAACATCGTTTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCa < 2:783951/150‑1 (MQ=255) tGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTg > 1:273719/1‑149 (MQ=255) gATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTg > 1:977246/1‑148 (MQ=255) gcgcagcgcaTGCCGCATTTTTCCCAATGGCGCTTTCATTAAGGCTGGGGGAAGCGGGATTCACGCAAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTg < 1:932043/150‑1 (MQ=255) cgcagcgcagGCCGCATGTTTCTCAATGGCTCTTTCATTAATGCTGGGGGAGGGGGGATTCCCGCCAACATCGATTGAGCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGa < 2:334209/150‑1 (MQ=255) ggcgaaTCCCGTATTTTTCTAAATGGCGTTTTCATTAATGCTGGGGGAGGGGGGATTCACGCAAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGt < 2:1144591/149‑1 (MQ=255) gcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGc > 2:616197/1‑150 (MQ=255) tGCCACATATTTCACAATGGCTTTTTTATTAATGCTGGGGGAACCGATTTTCACGCCAGCATCGATTGTTGCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGt < 2:1192836/150‑1 (MQ=255) gCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTg > 1:919594/1‑150 (MQ=255) ccGCATTTTTCTCAATGGCGTTTTCATTAATGCGGGGGGAAGCGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGc < 1:394634/150‑1 (MQ=255) gattttttCTAAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCAAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCg < 2:80828/145‑1 (MQ=255) cATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCgg > 2:1080241/1‑150 (MQ=255) aTGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCggg > 2:847168/1‑150 (MQ=255) tctcAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGATGCGGTGCCGGGTAtt > 1:1019095/1‑149 (MQ=255) tcccAATGGCGTTTTAATTAATGCGGGGGGAAGCGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTAtt < 1:862379/146‑1 (MQ=255) ctcAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGa > 2:208858/1‑150 (MQ=255) tcAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGAt > 1:467601/1‑150 (MQ=255) aaTGGCGCTTTCATTAATGCTGGGGGAAGGGGGATTCCCGCAAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGAt < 1:31466/148‑1 (MQ=255) aaTGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGc > 1:702924/1‑150 (MQ=255) ttttAATTAATGCTGGGGAAGGGGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTAcc < 2:649785/149‑1 (MQ=255) tttCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCt > 1:256373/1‑150 (MQ=255) cATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCttt > 2:457123/1‑149 (MQ=255) cATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCttt > 1:444232/1‑149 (MQ=255) cATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCttt > 2:717358/1‑149 (MQ=255) aTTAATGCTGGGGGAAGGGGGATTCACGCAAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTg < 2:975911/149‑1 (MQ=255) ttAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGAc < 1:634441/150‑1 (MQ=255) ttAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGAc > 2:1018803/1‑150 (MQ=255) aaTGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACg < 2:55562/149‑1 (MQ=255) tggtGGGGGACGGGGCATGCACCCAAACAGCGATTATTCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCa < 2:365084/147‑1 (MQ=255) ggggggggAGGCGGTTTTCCCGCCACCATCGTTTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCa < 2:572681/146‑1 (MQ=255) gCTGGGGGAAGGGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCAt < 2:1172086/150‑1 (MQ=255) gCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCa > 1:735296/1‑149 (MQ=255) cTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCAt > 1:949381/1‑149 (MQ=255) gggggAGGGGGGTTCCACGCAAACATCGTTTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAAt < 2:594574/150‑1 (MQ=255) gggggAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAAt > 1:810537/1‑150 (MQ=255) gggggAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAAt > 2:251389/1‑150 (MQ=255) aaGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAg > 1:29301/1‑149 (MQ=255) aGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGa > 2:227354/1‑149 (MQ=255) aGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGa > 1:152224/1‑149 (MQ=255) | ACAGTATCCACCGAGAGTGGCGTGCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAA‑CCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGA > CP009273/1550942‑1551239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |