| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,551,105 | C→A | 7.9% | P75Q (CCA→CAA) | osmC → | lipoyl‑dependent Cys‑based peroxidase, hydroperoxide resistance; salt‑shock inducible membrane protein; peroxiredoxin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,551,105 | 0 | C | A | 7.9% | 2847.3 / 23.0 | 938 | P75Q (CCA→CAA) | osmC | lipoyl‑dependent Cys‑based peroxidase, hydroperoxide resistance; salt‑shock inducible membrane protein; peroxiredoxin |
| Reads supporting (aligned to +/- strand): ref base C (465/367); new base A (5/99); total (470/468) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.72e-26 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
Only 100 of 960 total aligned reads displayed.
GAGTGGCGTGCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGAT > CP009273/1550956‑1551254 | cttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCa > 2:1070262‑M1/45‑150 (MQ=255) ttccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCa‑a < 2:23443‑M1/107‑1 (MQ=255) tccgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCa‑a < 2:35236‑M1/107‑1 (MQ=255) ccgcgatgacccagcgcccaatagtttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑Ac > 1:592396‑M1/42‑149 (MQ=255) cgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACa > 1:609040‑M1/41‑149 (MQ=255) cgcgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACAt > 1:896253‑M1/41‑150 (MQ=255) cgatgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGTGGAAGCGGGATTCACGCCA‑ACATc < 1:1017787‑M1/111‑1 (MQ=255) tGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGAtt > 1:942026/1‑149 (MQ=255) agcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATacc > 2:861082‑M1/30‑150 (MQ=255) cgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATaccac > 1:928630‑M1/28‑150 (MQ=255) ccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCAccgc < 1:268030‑M1/126‑1 (MQ=255) atattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGa < 1:715874‑M1/129‑1 (MQ=255) tattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGAt < 1:326562‑M1/130‑1 (MQ=255) tttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGAtgtg < 2:371564‑M1/133‑1 (MQ=255) gatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGc < 2:978345‑M1/137‑1 (MQ=255) tttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTg < 2:959245‑M1/139‑1 (MQ=255) ttcccccaatcTGAAGGGGAAAAGGGAACCACCCCTAAAGAACTGATTGGCGCGGCGCATGCCGCATGTTTCTCAATGGCGTTTTAATAAATGCTGGGGGAGGCGGGATTCACGCAA‑ACATCGATTGATACCACCGCCGATGTGTCGCTg > 1:220749‑M1/12‑150 (MQ=255) accaatctGAAGGCGAAAAAGGAACCACCCCTGAAGAACTGATGGGCGCAGCGCATGCCGCATTTTTCTCAATGGCGCTTTCATAAATGCTGGGGGAGGGGGGATTCACCCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATa < 2:201868/143‑1 (MQ=255) accaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATacca > 2:1110527‑M1/8‑129 (MQ=255) ccaatcTGAAGGCAAAAAAGGAACCACCCCTGAAGAACTGATTGGCGCAGCGCATGCCGAATGTTTCTCAAGGGCGTTTTCATTAATGCTGGGGGAGGCGGGATTCCCGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATaa > 1:1043630‑M1/7‑150 (MQ=255) caatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATa < 2:309872‑M1/143‑1 (MQ=255) aatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAg < 2:50995‑M1/146‑1 (MQ=255) atcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGt < 1:794239‑M1/147‑1 (MQ=255) cTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTg < 1:907566‑M1/148‑1 (MQ=255) TGAAGGCGAAAAAGGAACCACCCCTGAAGAACTGATGGGCGCAGCGCATGCCGCATTTTTCTCAAGGGCGTTTTAATTAATGCTGGGGGAGGCGGGATTCCCGCAA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGa > 1:993327‑M1/1‑150 (MQ=255) TGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGa < 2:683371‑M1/150‑1 (MQ=255) gAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAGGCGGGATTCACGCAA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGAt < 1:574502/150‑1 (MQ=255) gAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGAt > 1:1078349/1‑150 (MQ=255) aaggaaaaaaaGAAACAACCCCTGAAGAACTGATGGGCGCAGCGCATGCCGCTTGTTTCTCAATGGCGTTTTAATTAATGCTGGGGGAAGCGGGATTCACGCAA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGAt < 2:39017/143‑1 (MQ=255) aaGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATg > 1:624226/1‑150 (MQ=255) aaGGCGAAAAAGGAACCAACCCGGAAGAACTGATTGGCGCAGCGCATGCCGAATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGAAGGCGGGATTCACGCCA‑ACATCGTTTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATg < 1:444956/150‑1 (MQ=255) aaGGCGAAAAAGAACCCACCCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGa < 2:1090674/148‑1 (MQ=255) aaGGCGAAAAAGAAACCACCCCTAAAAAACTGATTGGCGCAGCGCATGCCGCATTTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGGGGGATTCACGCCA‑ACATCGTTTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATg < 1:679896/150‑1 (MQ=255) aagggAAAAAGAAACCACCCCTGAAGAACTGATTGGCGCAGCGAATGCCGATTGTTTCTAAATGGCGCTTTCATAAATGGTGGGGGAAGGGGAATCCCCGCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGAt < 1:145210/144‑1 (MQ=255) cGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCgg > 1:350521/1‑150 (MQ=255) gAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGt > 2:723455/1‑150 (MQ=255) aaaaaGGAACCACCCCGGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGtt < 1:308603/150‑1 (MQ=255) aaaGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGtttt < 1:1004018/150‑1 (MQ=255) gAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGc > 1:382075/1‑123 (MQ=255) gAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTAATTAATGCTGGGGGAAGGGGGATTCACGCCA‑CCATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGa < 2:838227/150‑1 (MQ=255) aaccacccCAGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCGGGGGGAAGCGGGATTCCCGCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGAt < 1:70290/150‑1 (MQ=255) accccTGAAGAGCTGATTGGCGCGGCGCATGCCGCATGTTTCCCAATGGCTCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGTTTGGTCCCAccgccg < 2:61573/107‑1 (MQ=255) aaccCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTAc > 2:75187/1‑149 (MQ=255) aaccCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTAc > 2:1029121/1‑149 (MQ=255) aaccCTGAAAAACTAATGGGCGCGGCGACGGCAATTTGTTCCTCAAGGGCTCTTTCATAAAGGCTGGGGAAAGCGGGTTTAGCACCACACA‑GGATGGTTCCAACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACg < 1:850169/150‑1 (MQ=255) cTGAAGAACTGATGGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCGGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGaaaa < 1:538952/150‑1 (MQ=255) tGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAAt > 1:637547/1‑150 (MQ=255) tGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAAt > 1:75956/1‑150 (MQ=255) aagaaCTGATTGGCGCAGCGCATGCCGCTTTTTTCACAATGGCGCTTTCATTAATGCTGGGGGAGGCGGGATTCACACCA‑ACATGGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCg < 2:793618/150‑1 (MQ=255) aagaaCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCg > 2:565995/1‑150 (MQ=255) aagaaCTGATTGGCGCAGCGCATGCCGAATGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAAt < 1:17755/148‑1 (MQ=255) atgggCGCAGCGCATGCCGCATTTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGCGGGATTCACGCAA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGaa < 2:916336/146‑1 (MQ=255) aTTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTg > 1:66030/1‑147 (MQ=255) tGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAagag > 1:289133/1‑150 (MQ=255) ggCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAagag < 1:966908/149‑1 (MQ=255) ggCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGt > 1:36095/1‑150 (MQ=255) ggcgcaTGCCGCATGTTTCTAAATGGCGTTTTCATTAATGCTGGGGGAGGGGGGATCCACGCAA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGt < 2:942026/149‑1 (MQ=255) agcgcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGt > 1:1113445/1‑150 (MQ=255) gcttGCCGCATTTTTCACAAGGGCGTTTTAATTACTGCGGGGGAGGGGGGGTTTCACGAAA‑ACATCGTTTTATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGc < 2:144412/147‑1 (MQ=255) gcaTGCCGCATGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGc < 1:738829/150‑1 (MQ=255) gcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGc > 2:452101/1‑150 (MQ=255) gcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGc > 1:494114/1‑150 (MQ=255) aTGCCGCATTTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGGGGGATTCACGCAA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCgg < 2:905919/150‑1 (MQ=255) aTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCgg > 2:170952/1‑150 (MQ=255) aTGCCGCATGTTTCTAAAGGGCGTTTTCATTAGTGCGGGGGGAAGGGGAATTCACGCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCgg < 1:1162267/150‑1 (MQ=255) tGCCGCTTTTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGt < 2:1178317/150‑1 (MQ=255) ccGCATTTTTCTCAATGGCGTTTTCATTAATGCGGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGc < 1:394634/150‑1 (MQ=255) cttGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAGGCGGGATTCACCCAA‑ACATCGTTTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCgg < 2:70397/148‑1 (MQ=255) cATGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAGGCGGGATTCACGCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCgg < 2:536395/150‑1 (MQ=255) aTGTTTCTCAATGGCGTTTTCATTAATGCGGGGGGAAGCGGGATTAACGCCA‑CCATCTATTAATCCCGCCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCggg < 2:32373/150‑1 (MQ=255) aTGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCggg > 2:1129533/1‑150 (MQ=255) ttttCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCggg < 2:627104/147‑1 (MQ=255) ttCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTAtt > 2:260301/1‑150 (MQ=255) ctcAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGa > 2:116172/1‑150 (MQ=255) ctcAATGGCCTTTTAATAAAGGCTGGGGGAAGGGGGATTCACGCAA‑ACATCGTTTGATACCCCCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTg < 2:523851/149‑1 (MQ=255) ggCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCctc > 2:658491/1‑150 (MQ=255) gggcTTTCATAAATGCTGGGGGAAGCGGGTTTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCctc < 2:80972/147‑1 (MQ=255) gttttCATTAATGCTGGGGGAAGGGGGTTTCACGCAA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTAc < 2:220199/148‑1 (MQ=255) cTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTAcc > 2:274665/1‑150 (MQ=255) tAACGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACg > 1:195046/1‑150 (MQ=255) aTGCTGGGGGAGGGGGGATTCACGCAA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGc < 2:873716/150‑1 (MQ=255) aTGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACgg > 1:134060/1‑149 (MQ=255) aTGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACgg > 2:1008839/1‑149 (MQ=255) cTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGTGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCAt > 1:474364/1‑149 (MQ=255) tGGGGGAAGCGGGATTCACGCCA‑ACCTCGATTGATACCACCGCCGATGTGTCGCTGGATCACGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGTGTATTGATGCCTCTACCTTTGACGGCATaa > 2:499195/1‑150 (MQ=255) gggggAAGGGGATTTAACGCAA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCTTCTACCTTTGACGGCATAAt < 2:1055587/150‑1 (MQ=255) gggggAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAAt > 1:810537/1‑150 (MQ=255) gggggAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAAt > 1:872700/1‑150 (MQ=255) ggaggggggATTCACCCCA‑TCAACGATGGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCa < 1:1105657/144‑1 (MQ=255) ggAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATc > 1:51482/1‑148 (MQ=255) aaGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAg > 2:548983/1‑149 (MQ=255) gggATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaag > 1:420670/1‑149 (MQ=255) ggATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagc > 2:415404/1‑149 (MQ=255) aTTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagcaa > 2:592512/1‑149 (MQ=255) aTTCACGCCA‑ACATCGATAGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagcaaa < 1:1139449/150‑1 (MQ=255) ttCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagcaa > 1:1188354/1‑148 (MQ=255) ttCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagcaa > 1:1057954/1‑148 (MQ=255) cGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAg > 1:254556/1‑150 (MQ=255) cGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAg > 2:121692/1‑150 (MQ=255) gCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGGGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAg > 1:835317/1‑149 (MQ=255) | GAGTGGCGTGCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGAT > CP009273/1550956‑1551254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |