| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,551,113 | A→T | 6.1% | I78F (ATT→TTT) | osmC → | lipoyl‑dependent Cys‑based peroxidase, hydroperoxide resistance; salt‑shock inducible membrane protein; peroxiredoxin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,551,113 | 0 | A | T | 6.1% | 2749.8 / 26.5 | 942 | I78F (ATT→TTT) | osmC | lipoyl‑dependent Cys‑based peroxidase, hydroperoxide resistance; salt‑shock inducible membrane protein; peroxiredoxin |
| Reads supporting (aligned to +/- strand): ref base A (466/406); new base T (3/64); total (471/471) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.33e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 959 total aligned reads displayed.
GCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTC > CP009273/1550965‑1551262 | tgacccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGAtt < 1:744334‑M1/115‑1 (MQ=255) acccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGa > 1:192830‑M1/34‑150 (MQ=255) ccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATa < 1:39017‑M1/119‑1 (MQ=255) cagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATac < 1:89789‑M1/120‑1 (MQ=255) atattttcgatttcaccaatcTGAAGGCGAAAAAGGAATCAACCCTGTAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATTGATTGATACCACCGCCGa < 2:147945‑M1/129‑1 (MQ=255) tattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGAt < 2:829621‑M1/130‑1 (MQ=255) tttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGAtgtg < 2:70290‑M1/133‑1 (MQ=255) tttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGAtgtg < 2:371564‑M1/133‑1 (MQ=255) ttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATgtgt < 2:50981‑M1/134‑1 (MQ=255) tcgatttcaccaatcTGAGGGCAAAAAAGGACCCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAGGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATgtgt > 2:628495‑M1/16‑149 (MQ=255) tttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTg < 2:914260‑M1/139‑1 (MQ=255) aatcTGAAGGCGAATAAGGAACCAACCCTGAAGAACTGATTGGCGCCGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAg < 2:1031521‑M1/146‑1 (MQ=255) atcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGt < 1:76518‑M1/147‑1 (MQ=255) gAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGAt > 1:1078349/1‑150 (MQ=255) gAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGAt > 2:255670/1‑150 (MQ=255) aaggaaaaaaaGAAACAACCCCTGAAGAACTGATGGGCGCAGCGCATGCCGCTTGTTTCTCAATGGCGTTTTAATTAATGCTGGGGGAAGCGGGATTCACGCAAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGAt < 2:39017/143‑1 (MQ=255) aaGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATg > 1:434287/1‑150 (MQ=255) aaGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCAGGCCGCATGTTTCAAAATGGCGCTTTCATTAATGCGGGGGGAAGCGGAATTCACGCAAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGAt < 1:1138787/149‑1 (MQ=255) aGGCGAAAAAGGAACAAACCCTGAAGACCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCCCGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGc < 1:626478/150‑1 (MQ=255) ggaaaaaaaGAAACCAACCCCAAAGAGCTGATGGGCGCAGGGCAGGCCGCATTTTCCTCAAGGGCCTTTTCATAAATGCGGGGGGAAGGGGGTTTCCCGCCAACAGCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGcc < 1:323181/146‑1 (MQ=255) gcaaaaaaGGAACCACCCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATTTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAGGCGGGATTCACGCAAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCg < 1:407391/147‑1 (MQ=255) gaaaaaaaGGAACAACCCCAGAAAAATTGATGGGCGCAGCGCATGCCGCATGTTCCTCAATGGCGTTTTAATAAATGCTGGGGGAAGGGGGATCCACGCAAAAATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCg < 2:938510/147‑1 (MQ=255) gAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGt > 2:414206/1‑150 (MQ=255) aaaaaGGACCCACCCCTGAAGAACTGATGGGCGCAGCGCATGCCGCATTTTTCTCAAGGGCGTTTTCATTAATGCTGGGGGAGGGGGGATTCACGCCAACATCGTTTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGtt < 2:445700/150‑1 (MQ=255) aaaaGGAACCACCCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATTTTTCTCAATGGCGCTTTCATTAATGTTGGGGGAAGCGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGttt < 1:795133/150‑1 (MQ=255) aaaaGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGttt > 2:56834/1‑150 (MQ=255) aaaGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGtttt < 1:1004018/150‑1 (MQ=255) aaGGACCCACCCCTGAAGAACTGATGGGCGCAGCGCATGCCGCATTTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAGGCGGGATCCCCGCCAACATCGTTTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTg < 2:1166355/150‑1 (MQ=255) aaGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTg > 1:593840/1‑150 (MQ=255) aaGGAACCAACCCAGAAGACCTGATTGCCGCGGGGGATGCCCATTTTTTCTCATTGGCGTTTTCATTAATGCTGGGGGAGGCGGTATCCACGCCAACTTCGATTAATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTg < 2:979462/150‑1 (MQ=255) gAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGa > 1:507340/1‑150 (MQ=255) aaccacccCAGAGGAACTAATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCGGGGGGAAGCGGGATTCCCCCCAACATCGATTGATACCGCCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGAt < 1:613940/150‑1 (MQ=255) ccTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGaaa < 1:705106/150‑1 (MQ=255) ccTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGaa > 2:308939/1‑149 (MQ=255) ctaaagaaCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGaaaa < 1:873212/147‑1 (MQ=255) tGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAAt > 2:792199/1‑150 (MQ=255) gaagaaCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATc > 2:271901/1‑150 (MQ=255) gaagaaCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATc > 2:719734/1‑150 (MQ=255) aagaaCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATc < 1:23443/149‑1 (MQ=255) aagaaCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCg > 2:1015773/1‑150 (MQ=255) aaCTGATTGGGCAAGCGCTGGCGGCTTGTTTCTAAATGGCGTTTTCATAAATGCTGGGGGAGGGGGGATTCACGCCAACATCTATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCAc < 2:898148/150‑1 (MQ=255) aCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACt > 1:995714/1‑150 (MQ=255) tGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTg > 2:855130/1‑149 (MQ=255) gATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTg > 2:1055868/1‑148 (MQ=255) gATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTg > 1:977246/1‑148 (MQ=255) aTTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCTTTTTCATTAAGGCTGGGGGAAGCGGGATTCACCCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAag < 1:125368/150‑1 (MQ=255) aTTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTg > 1:142041/1‑147 (MQ=255) tGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAagag > 1:341808/1‑150 (MQ=255) ggCGCAGCGCATGCCGCATTTTTCTCAATGGCGCTTTCATTAATGCGGGGGGAAGGGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGt < 1:282469/150‑1 (MQ=255) ggCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGt > 1:169508/1‑150 (MQ=255) ggCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCAAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGt < 1:1059377/150‑1 (MQ=255) cgcagcgcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTg > 1:909169/1‑149 (MQ=255) cagcgcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAg > 2:1136385/1‑150 (MQ=255) agcgcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGt > 1:1113445/1‑150 (MQ=255) agcgcaTGCCGCATGTTTCTAAAGGGCGTTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGt < 1:813229/150‑1 (MQ=255) gcgcaTGCCGCATGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGtt < 1:213502/150‑1 (MQ=255) cgctTGCCGCTTGTTTCTCAAGGGCGCTTTCATTAATGCTGGGGGAAGGGGGATCCACGCAAACATCGATTAATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTg < 1:353172/150‑1 (MQ=255) gcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGCTGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGc > 2:223909/1‑150 (MQ=255) gcaGGCCGAATGTTTCTAAAGGGCGTTTTCATTAATGTGGGGGGAGGGGGGATTCACGCAAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGc < 2:1111421/150‑1 (MQ=255) caggCCGGATTTTTCACAATGGCGCTTTCTTTAATGGTGGGGGAAGGGGGATTCACGCAAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCg < 2:596999/147‑1 (MQ=255) aggCCGCTTGTTTCCAAAGGGCGTTTTCATAAAGGCGGGGGGAGGGGGGATTCACCCAAACATCGTTTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCgg < 2:1182799/148‑1 (MQ=255) gCCCCATTTTTCTAAATGGCGTTTTAATAAATGTGGGGGGAGGGGGGTTTCCCGCAAACATCGATTGATACCACCGCCGATGTGTCGCTGGATGAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTg < 2:620475/150‑1 (MQ=255) aTGTTTCTCAATGGCGTTTTCATTAATGCGGGGGGAAGCGGGATTAACGCCACCATCTATTAATCCCGCCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCggg < 2:32373/150‑1 (MQ=255) ttCTCAATGGCGTTTTAATTAGTGCGGGGGGAGGCGGGATTCCCGCAAACATCGATTAATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTAt < 1:485873/149‑1 (MQ=255) ttCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTAtt > 1:839621/1‑150 (MQ=255) tctcAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTAtt > 2:185748/1‑149 (MQ=255) tctcAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGATGCGGTGCCGGGTAtt > 1:1019095/1‑149 (MQ=255) ctcAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGa > 2:208858/1‑150 (MQ=255) ctcAATGGCCTTTTAATAAAGGCTGGGGGAAGGGGGATTCACGCAAACATCGTTTGATACCCCCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTg < 2:523851/149‑1 (MQ=255) cAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTAatgatg > 1:575362/1‑150 (MQ=255) tGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCct > 1:303463/1‑150 (MQ=255) ggCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCctc > 2:658491/1‑150 (MQ=255) gcTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTAc > 1:524276/1‑150 (MQ=255) cTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTAcc > 1:948732/1‑150 (MQ=255) taaTTAATGTGGGGGGAGGCGGGATTCACGCCAACATGGTTTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCtt < 1:856513/147‑1 (MQ=255) cATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCttt < 1:262880/149‑1 (MQ=255) ttAATGCTGGGGGAGGCGGGATTCACGCAAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGAc < 1:1153613/150‑1 (MQ=255) ttAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTAATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGAc < 1:464572/150‑1 (MQ=255) tAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACg > 1:1104404/1‑150 (MQ=255) aaTGCTGGGGGAGGCGGGATTCCCGCCAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACg < 2:535077/149‑1 (MQ=255) aaTGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACg < 2:55562/149‑1 (MQ=255) tGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATaa > 1:929874/1‑150 (MQ=255) tGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATaa > 2:808622/1‑150 (MQ=255) gggggAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAAt < 1:689034/150‑1 (MQ=255) gggAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATc > 2:1078518/1‑149 (MQ=255) ggAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATc > 1:1044375/1‑148 (MQ=255) ggggggTTTCACCCCACCATGGTTTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaa < 2:748006/147‑1 (MQ=255) aGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGa > 2:1101747/1‑149 (MQ=255) gggATTCACGCCAACATCGATTGATACCACCGCCGCTGTGTCGCTGGATAAAGAGGATGCCGGTTTTGCGATTACCAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGTCTCTACCTTTGACGGCATAATCCAGaaag > 2:959199/1‑149 (MQ=255) ggATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagc > 1:1180260/1‑149 (MQ=255) aCGCCAACATGGATTAATGCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagcaaaagca < 1:642449/150‑1 (MQ=255) gCCACCTTCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAgg < 2:134060/150‑1 (MQ=255) gCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAg > 1:664983/1‑149 (MQ=255) cAACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGAt < 1:369922/150‑1 (MQ=255) aaCATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATg < 2:348003/150‑1 (MQ=255) aCATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGc > 2:682596/1‑150 (MQ=255) aTCGTTTAATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGccc < 2:479302/150‑1 (MQ=255) tCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGAt < 2:87173/102‑1 (MQ=255) tCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGAt < 1:728570/145‑1 (MQ=255) gATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCgg < 1:552219/149‑1 (MQ=255) | GCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTC > CP009273/1550965‑1551262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |